RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 NDUFB10O96000 172 aa7.4□□□□□ -1.23
TGFBR3-207ENST00000525962 NQO1P15559 274 aaKnown RBP7.4□□□□□ -1.23
TGFBR3-207ENST00000525962 STAT2P52630 851 aa7.4□□□□□ -1.23
TGFBR3-207ENST00000525962 DMP1Q13316 513 aaPredicted RBP7.4□□□□□ -1.23
TGFBR3-207ENST00000525962 GEN1Q17RS7 908 aa7.4□□□□□ -1.23
TGFBR3-207ENST00000525962 FIGNQ5HY92 759 aa7.4□□□□□ -1.23
TGFBR3-207ENST00000525962 KCNT1Q5JUK3 1230 aa7.4□□□□□ -1.23
TGFBR3-207ENST00000525962 ARHGEF16Q5VV41 709 aa7.4□□□□□ -1.23
TGFBR3-207ENST00000525962 SPOPLQ6IQ16 392 aa7.4□□□□□ -1.23
TGFBR3-207ENST00000525962 TMEM154Q6P9G4 183 aa7.4□□□□□ -1.23
TGFBR3-207ENST00000525962 PPM1NQ8N819 430 aa7.4□□□□□ -1.23
TGFBR3-207ENST00000525962 STK33Q9BYT3 514 aa7.4□□□□□ -1.23
TGFBR3-207ENST00000525962 FAM129AQ9BZQ8 928 aa7.4□□□□□ -1.23
TGFBR3-207ENST00000525962 TRABDQ9H4I3 376 aa7.4□□□□□ -1.23
TGFBR3-207ENST00000525962 RAVER2Q9HCJ3 691 aaKnown RBP7.4□□□□□ -1.23
TGFBR3-207ENST00000525962 DDX4Q9NQI0 724 aaKnown RBP7.4□□□□□ -1.23
TGFBR3-207ENST00000525962 CHST7Q9NS84 486 aa7.4□□□□□ -1.23
TGFBR3-207ENST00000525962 SAE1Q9UBE0 346 aaPredicted RBP7.4□□□□□ -1.23
TGFBR3-207ENST00000525962 SCOCQ9UIL1 159 aa7.4□□□□□ -1.23
TGFBR3-207ENST00000525962 IGSF9BQ9UPX0 1349 aa7.4□□□□□ -1.23
TGFBR3-207ENST00000525962 FAM86B1E9PN63 330 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 PDXKO00764 312 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 TLR3O15455 904 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 PFDN1O60925 122 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 PHF2O75151 1096 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 ENO1P06733 434 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 FAM86B2P0C5J1 330 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 NCF2P19878 526 aaPredicted RBP7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 NUMBP49757 651 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 FXR2P51116 673 aaKnown RBP eCLIP7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 DRP2Q13474 957 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 MTMR2Q13614 643 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 TTLL12Q14166 644 aaPredicted RBP7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 GRAMD1BQ3KR37 738 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 HAUS6Q7Z4H7 955 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 ARHGEF19Q8IW93 802 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 SUGP1Q8IWZ8 645 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 ATP8B4Q8TF62 1192 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 GRK7Q8WTQ7 553 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 SLC35C1Q96A29 364 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 DNAJC19Q96DA6 116 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 ACCSQ96QU6 501 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 TXLNGQ9NUQ3 528 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 ARL2BPQ9Y2Y0 163 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 ZBTB12Q9Y330 459 aaPredicted RBP7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 SLIT1O75093 1534 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 PPIP5K2O43314 1243 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 SRGAP2CP0DJJ0 459 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 RARAP10276 462 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 SOX11P35716 441 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 COILP38432 576 aaPredicted RBP7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 CRKP46108 304 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 GCLCP48506 637 aaPredicted RBP7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 SPARCL1Q14515 664 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 PPP6R3Q5H9R7 873 aaPredicted RBP7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 UBAP2Q5T6F2 1119 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 C16orf86Q6ZW13 317 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 RHPN2Q8IUC4 686 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 THNSL1Q8IYQ7 743 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 ARHGAP24Q8N264 748 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 DEPTORQ8TB45 409 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 LNX1Q8TBB1 728 aaPredicted RBP7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 P3H4Q92791 437 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 MTFR1LQ9H019 292 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 GLT8D2Q9H1C3 349 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 VCX3BQ9H321 246 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 SUCLA2Q9P2R7 463 aaPredicted RBP7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 EXOC7Q9UPT5 735 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 GJA3Q9Y6H8 435 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 LOC100653049A0A140TA62 436 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 PPEF1O14829 653 aaPredicted RBP7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 GRAP2O75791 330 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 KRT34O76011 436 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 FSBPO95073 299 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 LUC7L3O95232 432 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 ARP10275 920 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 ETS1P14921 441 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 EPHB2P29323 1055 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 COPS2P61201 443 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 TMPRSS15P98073 1019 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 CDR2Q01850 454 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 SF3B3Q15393 1217 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 MAP7D1Q3KQU3 841 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 ATP13A4Q4VNC1 1196 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 THEMIS2Q5TEJ8 643 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 AGBL2Q5U5Z8 902 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 ARMC3Q5W041 872 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 LRIG3Q6UXM1 1119 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 PPP4R3CPQ6ZMV5 832 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 SULF1Q8IWU6 871 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 ACER1Q8TDN7 264 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 DDX50Q9BQ39 737 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 IFT122Q9HBG6 1241 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 AGPAT3Q9NRZ7 376 aa7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 GOLGB1Q14789 3259 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-207ENST00000525962 ANKRD63C9JTQ0 380 aa7.38□□□□□ -1.23
TGFBR3-207ENST00000525962 AGTP01019 485 aa7.38□□□□□ -1.23
TGFBR3-207ENST00000525962 KRT16P08779 473 aa7.38□□□□□ -1.23
TGFBR3-207ENST00000525962 GAP43P17677 238 aa7.38□□□□□ -1.23
TGFBR3-207ENST00000525962 RRM1P23921 792 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms