RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 MEIS3P2A8K0S8 358 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 ANKRD63C9JTQ0 380 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 RECQL4O94761 1208 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 ADRB2P07550 413 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 LINC00271P0C7V0 271 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 LAG3P18627 525 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 AKAP5P24588 427 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 ADSSP30520 456 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 HOXD13P35453 343 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 MATR3P43243 847 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCS-202ENST00000525435 GATMP50440 423 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 PNOCQ13519 176 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 COBLL1Q53SF7 1204 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 LRRC55Q6ZSA7 311 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 C12orf56Q8IXR9 622 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 THNSL1Q8IYQ7 743 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 GUF1Q8N442 669 aaKnown RBP13.51□□□□□ -0.25
CCS-202ENST00000525435 GSTCDQ8NEC7 633 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 POMGNT1Q8WZA1 660 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 P2RX5Q93086 422 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 MSTO1Q9BUK6 570 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 FGFBP2Q9BYJ0 223 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 KIAA1586Q9HCI6 787 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 TBC1D13Q9NVG8 400 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 AGO2Q9UKV8 859 aaKnown RBP13.51□□□□□ -0.25
CCS-202ENST00000525435 PCDHB12Q9Y5F1 795 aa13.51□□□□□ -0.25
CCS-202ENST00000525435 PDXKO00764 312 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 FAM189A1O60320 539 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 MBD3O95983 291 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 ALDH2P05091 517 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 KCNE1P15382 129 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 PPM1AP35813 382 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 PPP1R2P41236 205 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 ALDH7A1P49419 539 aaKnown RBP13.5□□□□□ -0.25
CCS-202ENST00000525435 RNASELQ05823 741 aaKnown RBP13.5□□□□□ -0.25
CCS-202ENST00000525435 GRIK3Q13003 919 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 MYBPC2Q14324 1141 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 PAN2Q504Q3 1202 aaKnown RBP13.5□□□□□ -0.25
CCS-202ENST00000525435 EPC2Q52LR7 807 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 ZNF658Q5TYW1 1059 aaPredicted RBP13.5□□□□□ -0.25
CCS-202ENST00000525435 KIAA0895Q8NCT3 520 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 GLIS3Q8NEA6 775 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 FAM193BQ96PV7 902 aaPredicted RBP13.5□□□□□ -0.25
CCS-202ENST00000525435 RPS6KC1Q96S38 1066 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 TMEM175Q9BSA9 504 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 C11orf84Q9BUA3 381 aaPredicted RBP13.5□□□□□ -0.25
CCS-202ENST00000525435 APOL6Q9BWW8 343 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 HAPLN2Q9GZV7 340 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 TTYH1Q9H313 450 aaPredicted RBP13.5□□□□□ -0.25
CCS-202ENST00000525435 CWH43Q9H720 699 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 SLC38A7Q9NVC3 462 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 STK39Q9UEW8 545 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 CPSF3Q9UKF6 684 aaKnown RBP13.5□□□□□ -0.25
CCS-202ENST00000525435 INPP5FQ9Y2H2 1132 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 GDAQ9Y2T3 454 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 MYH11P35749 1972 aa13.5□□□□□ -0.25
CCS-202ENST00000525435 TTC26A0AVF1 554 aa13.49□□□□□ -0.25
CCS-202ENST00000525435 H3BNC9 293 aa13.49□□□□□ -0.25
CCS-202ENST00000525435 TGFB1I1O43294 461 aa13.49□□□□□ -0.25
CCS-202ENST00000525435 ARHGEF15O94989 841 aa13.49□□□□□ -0.25
CCS-202ENST00000525435 THP07101 528 aa13.49□□□□□ -0.25
CCS-202ENST00000525435 POU3F3P20264 500 aaPredicted RBP13.49□□□□□ -0.25
CCS-202ENST00000525435 MCM4P33991 863 aa13.49□□□□□ -0.25
CCS-202ENST00000525435 MLH1P40692 756 aa13.49□□□□□ -0.25
CCS-202ENST00000525435 DSC1Q08554 894 aa13.49□□□□□ -0.25
CCS-202ENST00000525435 SLC10A6Q3KNW5 377 aa13.49□□□□□ -0.25
CCS-202ENST00000525435 TRIML1Q8N9V2 468 aa13.49□□□□□ -0.25
CCS-202ENST00000525435 ZFP42Q96MM3 310 aa13.49□□□□□ -0.25
CCS-202ENST00000525435 ZNF558Q96NG5 402 aa13.49□□□□□ -0.25
CCS-202ENST00000525435 CLSTN2Q9H4D0 955 aa13.49□□□□□ -0.25
CCS-202ENST00000525435 NRDE2Q9H7Z3 1164 aa13.49□□□□□ -0.25
CCS-202ENST00000525435 RPF1Q9H9Y2 349 aaKnown RBP13.49□□□□□ -0.25
CCS-202ENST00000525435 AGPAT3Q9NRZ7 376 aa13.49□□□□□ -0.25
CCS-202ENST00000525435 MIOSQ9NXC5 875 aa13.49□□□□□ -0.25
CCS-202ENST00000525435 LMCD1Q9NZU5 365 aa13.49□□□□□ -0.25
CCS-202ENST00000525435 CNTN3Q9P232 1028 aa13.49□□□□□ -0.25
CCS-202ENST00000525435 KIAA1468Q9P260 1216 aa13.49□□□□□ -0.25
CCS-202ENST00000525435 SMIM28A0A1B0GU29 152 aa13.48□□□□□ -0.25
CCS-202ENST00000525435 EXTL3O43909 919 aa13.48□□□□□ -0.25
CCS-202ENST00000525435 POMCP01189 267 aa13.48□□□□□ -0.25
CCS-202ENST00000525435 GALTP07902 379 aa13.48□□□□□ -0.25
CCS-202ENST00000525435 PTMSP20962 102 aa13.48□□□□□ -0.25
CCS-202ENST00000525435 SCNN1GP51170 649 aa13.48□□□□□ -0.25
CCS-202ENST00000525435 AFF1P51825 1210 aaKnown RBP13.48□□□□□ -0.25
CCS-202ENST00000525435 BCAR1P56945 870 aa13.48□□□□□ -0.25
CCS-202ENST00000525435 PLCB3Q01970 1234 aa13.48□□□□□ -0.25
CCS-202ENST00000525435 KRT17Q04695 432 aa13.48□□□□□ -0.25
CCS-202ENST00000525435 UBE3AQ05086 875 aa13.48□□□□□ -0.25
CCS-202ENST00000525435 NFIL3Q16649 462 aa13.48□□□□□ -0.25
CCS-202ENST00000525435 SPOUT1Q5T280 376 aaKnown RBP13.48□□□□□ -0.25
CCS-202ENST00000525435 ARMCX5Q6P1M9 558 aa13.48□□□□□ -0.25
CCS-202ENST00000525435 KCNT2Q6UVM3 1135 aa13.48□□□□□ -0.25
CCS-202ENST00000525435 NT5DC4Q86YG4 428 aa13.48□□□□□ -0.25
CCS-202ENST00000525435 SLC9A9Q8IVB4 645 aa13.48□□□□□ -0.25
CCS-202ENST00000525435 COLGALT2Q8IYK4 626 aa13.48□□□□□ -0.25
CCS-202ENST00000525435 DEFB123Q8N688 67 aa13.48□□□□□ -0.25
CCS-202ENST00000525435 CEP120Q8N960 986 aa13.48□□□□□ -0.25
CCS-202ENST00000525435 COLGALT1Q8NBJ5 622 aa13.48□□□□□ -0.25
CCS-202ENST00000525435 FBXO22Q8NEZ5 403 aa13.48□□□□□ -0.25
CCS-202ENST00000525435 ARNTL2Q8WYA1 636 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms