RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-223ENST00000524356 APEX1P27695 318 aaKnown RBP5.4□□□□□ -1.54
PCM1-223ENST00000524356 RAB27AP51159 221 aa5.4□□□□□ -1.54
PCM1-223ENST00000524356 ELLP55199 621 aaPredicted RBP5.4□□□□□ -1.54
PCM1-223ENST00000524356 SESN2P58004 480 aaPredicted RBP5.4□□□□□ -1.54
PCM1-223ENST00000524356 FOXI1Q12951 378 aa5.4□□□□□ -1.54
PCM1-223ENST00000524356 PAK1Q13153 545 aa5.4□□□□□ -1.54
PCM1-223ENST00000524356 HSP90AA2PQ14568 343 aaPredicted RBP5.4□□□□□ -1.54
PCM1-223ENST00000524356 DCAF17Q5H9S7 520 aaPredicted RBP5.4□□□□□ -1.54
PCM1-223ENST00000524356 PPP4R4Q6NUP7 873 aa5.4□□□□□ -1.54
PCM1-223ENST00000524356 MAMDC2Q7Z304 686 aaPredicted RBP5.4□□□□□ -1.54
PCM1-223ENST00000524356 C1QL2Q7Z5L3 287 aa5.4□□□□□ -1.54
PCM1-223ENST00000524356 MYO1HQ8N1T3 1032 aa5.4□□□□□ -1.54
PCM1-223ENST00000524356 SYNPOQ8N3V7 929 aa5.4□□□□□ -1.54
PCM1-223ENST00000524356 LINC00476Q8WZB0 136 aa5.4□□□□□ -1.54
PCM1-223ENST00000524356 ST8SIA2Q92186 375 aa5.4□□□□□ -1.54
PCM1-223ENST00000524356 NINJ1Q92982 152 aa5.4□□□□□ -1.54
PCM1-223ENST00000524356 GFM2Q969S9 779 aaKnown RBP5.4□□□□□ -1.54
PCM1-223ENST00000524356 CAAP1Q9H8G2 361 aa5.4□□□□□ -1.54
PCM1-223ENST00000524356 SMURF1Q9HCE7 757 aa5.4□□□□□ -1.54
PCM1-223ENST00000524356 ARHGEF4Q9NR80 690 aa5.4□□□□□ -1.54
PCM1-223ENST00000524356 MCM8Q9UJA3 840 aa5.4□□□□□ -1.54
PCM1-223ENST00000524356 TRAF6Q9Y4K3 522 aa5.4□□□□□ -1.54
PCM1-223ENST00000524356 SAMD9Q5K651 1589 aa5.4□□□□□ -1.55
PCM1-223ENST00000524356 DIP2CQ9Y2E4 1556 aa5.4□□□□□ -1.55
PCM1-223ENST00000524356 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.4□□□□□ -1.55
PCM1-223ENST00000524356 MLH3Q9UHC1 1453 aa5.39□□□□□ -1.55
PCM1-223ENST00000524356 KATNA1O75449 491 aa5.39□□□□□ -1.55
PCM1-223ENST00000524356 RASGRP1O95267 797 aa5.39□□□□□ -1.55
PCM1-223ENST00000524356 FOSP01100 380 aaPredicted RBP5.39□□□□□ -1.55
PCM1-223ENST00000524356 FGAP02671 866 aa5.39□□□□□ -1.55
PCM1-223ENST00000524356 HK1P19367 917 aa5.39□□□□□ -1.55
PCM1-223ENST00000524356 SEC24CP53992 1094 aa5.39□□□□□ -1.55
PCM1-223ENST00000524356 SSRP1Q08945 709 aaKnown RBP5.39□□□□□ -1.55
PCM1-223ENST00000524356 MAP3K12Q12852 859 aa5.39□□□□□ -1.55
PCM1-223ENST00000524356 FXNQ16595 210 aa5.39□□□□□ -1.55
PCM1-223ENST00000524356 C10orf62Q5T681 223 aaPredicted RBP5.39□□□□□ -1.55
PCM1-223ENST00000524356 CMTR2Q8IYT2 770 aaKnown RBP5.39□□□□□ -1.55
PCM1-223ENST00000524356 FAM9BQ8IZU0 186 aa5.39□□□□□ -1.55
PCM1-223ENST00000524356 AFAP1L2Q8N4X5 818 aa5.39□□□□□ -1.55
PCM1-223ENST00000524356 TTC8Q8TAM2 541 aa5.39□□□□□ -1.55
PCM1-223ENST00000524356 WASF1Q92558 559 aa5.39□□□□□ -1.55
PCM1-223ENST00000524356 AARSD1Q9BTE6 412 aaKnown RBP5.39□□□□□ -1.55
PCM1-223ENST00000524356 ZIM2Q9NZV7 527 aa5.39□□□□□ -1.55
PCM1-223ENST00000524356 RCAN3Q9UKA8 241 aa5.39□□□□□ -1.55
PCM1-223ENST00000524356 DENND2AQ9ULE3 1009 aa5.39□□□□□ -1.55
PCM1-223ENST00000524356 NPATQ14207 1427 aa5.39□□□□□ -1.55
PCM1-223ENST00000524356 AGLP35573 1532 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 TMEM200CA6NKL6 621 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 AKAP10O43572 662 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 RBMXL2O75526 392 aaKnown RBP5.38□□□□□ -1.55
PCM1-223ENST00000524356 STC2O76061 302 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 RECQL4O94761 1208 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 GYPEP15421 78 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 SOX5P35711 763 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 PLA2G5P39877 138 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 GUCY2FP51841 1108 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 LMOD3Q0VAK6 560 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 GPR162Q16538 588 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 CT47A1Q5JQC4 288 aaPredicted RBP5.38□□□□□ -1.55
PCM1-223ENST00000524356 LCE1EQ5T753 118 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 FSTL4Q6MZW2 842 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 EP400NLQ6ZTU2 488 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 PCDH19Q8TAB3 1148 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 FBXW5Q969U6 566 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 GBP4Q96PP9 640 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 ZNF700Q9H0M5 742 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 FBXO9Q9UK97 447 aaPredicted RBP5.38□□□□□ -1.55
PCM1-223ENST00000524356 ZNF644Q9H582 1327 aaPredicted RBP5.38□□□□□ -1.55
PCM1-223ENST00000524356 PLA2R1Q13018 1463 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 ZNF518AQ6AHZ1 1483 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 KDM5CP41229 1560 aa5.38□□□□□ -1.55
PCM1-223ENST00000524356 ABCA6Q8N139 1617 aa5.37□□□□□ -1.55
PCM1-223ENST00000524356 GSG1L2A8MUP6 293 aa5.37□□□□□ -1.55
PCM1-223ENST00000524356 TOX4O94842 621 aa5.37□□□□□ -1.55
PCM1-223ENST00000524356 VSIG10L2P0DP72 767 aa5.37□□□□□ -1.55
PCM1-223ENST00000524356 PTMSP20962 102 aa5.37□□□□□ -1.55
PCM1-223ENST00000524356 NEK2P51955 445 aa5.37□□□□□ -1.55
PCM1-223ENST00000524356 PABPC4Q13310 644 aaKnown RBP eCLIP5.37□□□□□ -1.55
PCM1-223ENST00000524356 YOD1Q5VVQ6 348 aaPredicted RBP5.37□□□□□ -1.55
PCM1-223ENST00000524356 KSR2Q6VAB6 950 aa5.37□□□□□ -1.55
PCM1-223ENST00000524356 NSMFQ6X4W1 530 aa5.37□□□□□ -1.55
PCM1-223ENST00000524356 KRBA2Q6ZNG9 492 aa5.37□□□□□ -1.55
PCM1-223ENST00000524356 ARHGEF19Q8IW93 802 aa5.37□□□□□ -1.55
PCM1-223ENST00000524356 LCORLQ8N3X6 602 aa5.37□□□□□ -1.55
PCM1-223ENST00000524356 GPATCH11Q8N954 259 aa5.37□□□□□ -1.55
PCM1-223ENST00000524356 HIPK4Q8NE63 616 aa5.37□□□□□ -1.55
PCM1-223ENST00000524356 ZSWIM2Q8NEG5 633 aa5.37□□□□□ -1.55
PCM1-223ENST00000524356 SVIPQ8NHG7 77 aa5.37□□□□□ -1.55
PCM1-223ENST00000524356 NKD2Q969F2 451 aaPredicted RBP5.37□□□□□ -1.55
PCM1-223ENST00000524356 COQ10AQ96MF6 247 aa5.37□□□□□ -1.55
PCM1-223ENST00000524356 SMAD5Q99717 465 aaKnown RBP5.37□□□□□ -1.55
PCM1-223ENST00000524356 SLC46A2Q9BY10 475 aa5.37□□□□□ -1.55
PCM1-223ENST00000524356 RTFDC1Q9BY42 306 aaPredicted RBP5.37□□□□□ -1.55
PCM1-223ENST00000524356 KCNH6Q9H252 994 aa5.37□□□□□ -1.55
PCM1-223ENST00000524356 SAE1Q9UBE0 346 aaPredicted RBP5.37□□□□□ -1.55
PCM1-223ENST00000524356 INTUQ9ULD6 942 aa5.37□□□□□ -1.55
PCM1-223ENST00000524356 PRPF3O43395 683 aaKnown RBP5.36□□□□□ -1.55
PCM1-223ENST00000524356 FAM153BP0C7A2 387 aa5.36□□□□□ -1.55
PCM1-223ENST00000524356 CD53P19397 219 aa5.36□□□□□ -1.55
PCM1-223ENST00000524356 CXCR5P32302 372 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms