RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 STAG3L1P0CL83 205 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 GFPT1Q06210 699 aaPredicted RBP17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 TTC30BQ8N4P2 665 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 RFFLQ8WZ73 363 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 ZNF512Q96ME7 567 aaPredicted RBP17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 CDC42BPBQ9Y5S2 1711 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 ZNF197O14709 1029 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 NCF2P19878 526 aaPredicted RBP17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 TPI1P60174 286 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 KRT17Q04695 432 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 DMTNQ08495 405 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 PTK2BQ14289 1009 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 SV2CQ496J9 727 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 ANGPTL8Q6UXH0 198 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 STOX1Q6ZVD7 989 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 SARS2Q9NP81 518 aaKnown RBP17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 THEGQ9P2T0 379 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 TECPR2O15040 1411 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 UBE2Q2LH0YL09 131 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 PRR29P0C7W0 189 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 GUCY1A2P33402 732 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 ACOT2P49753 483 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 NCOA4Q13772 614 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 FAM117BQ6P1L5 589 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 ANKEF1Q9NU02 776 aa17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.21■□□□□ 0.35
PCDHA3-201ENST00000522353 CHRNA3P32297 505 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 SNRPFP62306 86 aaKnown RBP17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 CACNB2Q08289 660 aaPredicted RBP17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 ATF7IP2Q5U623 682 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 LMBRD2Q68DH5 695 aaPredicted RBP17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 AP3B1O00203 1094 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 PPFIA2O75334 1257 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 GYS1P13807 737 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 EFCAB12Q6NXP0 572 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 NOTUMQ6P988 496 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 GLYCTKQ8IVS8 523 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 UPF3AQ9H1J1 476 aaKnown RBP17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 GOLPH3LQ9H4A5 285 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 EPHX2P34913 555 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 COL23A1Q86Y22 540 aaPredicted RBP17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 EGFL8Q99944 293 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 NFU1Q9UMS0 254 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 G3BP2Q9UN86 482 aaKnown RBP17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 WDR91A4D1P6 747 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 POLRMTO00411 1230 aaKnown RBP17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 SMIM24O75264 130 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 TMPRSS15P98073 1019 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 SLC7A5Q01650 507 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 SPARCL1Q14515 664 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 IMPG1Q17R60 797 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 PID1Q7Z2X4 250 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 VPS11Q9H270 941 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 JMJD4Q9H9V9 463 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 GBA2Q9HCG7 927 aaPredicted RBP17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 PPP2R3BQ9Y5P8 575 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 RPLP2P05387 115 aaKnown RBP17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 VEGFAP15692 232 aaPredicted RBP17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 SLC1A1P43005 524 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 KIF19Q2TAC6 998 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 SHC4Q6S5L8 630 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 TAS2R42Q7RTR8 314 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 CNPY4Q8N129 248 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 CENPKQ9BS16 269 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 MROH8Q9H579 483 aa17.2■□□□□ 0.34
PCDHA3-201ENST00000522353 DCDC2CA8MYV0 355 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 APOL1O14791 398 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 CAP2P40123 477 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 COPS2P61201 443 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 HP1BP3Q5SSJ5 553 aaPredicted RBP17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 PLEKHH3Q7Z736 793 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 DCUN1D1Q96GG9 259 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 ACTR5Q9H9F9 607 aaPredicted RBP17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 DDX53Q86TM3 631 aaKnown RBP17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 AGPAT1Q99943 283 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 NEXMIFQ5QGS0 1516 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 IGSF9BQ9UPX0 1349 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 CLCN6P51797 869 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 RPS6P62753 249 aaKnown RBP17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 SNRNP35Q16560 246 aaKnown RBP17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 ARRDC4Q8NCT1 418 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 PBXIP1Q96AQ6 731 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 REEP2Q9BRK0 252 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 TRIM45Q9H8W5 580 aaPredicted RBP17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 ABCB6Q9NP58 842 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 FGFR1OP2Q9NVK5 253 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 FBXO2Q9UK22 296 aaPredicted RBP17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 PTPRMP28827 1452 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 DFFAO00273 331 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 OR1G1P47890 313 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 FBXO41Q8TF61 875 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 AGBL1Q96MI9 1066 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 PCDHB7Q9Y5E2 793 aa17.19■□□□□ 0.34
PCDHA3-201ENST00000522353 DNAJC6O75061 913 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 TMEM62Q0P6H9 643 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 C7orf25Q9BPX7 421 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 SH2D3AQ9BRG2 576 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 NDFIP2Q9NV92 336 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 C17orf102A2RUQ5 167 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms