RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 TRIM49CP0CI26 452 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 UBASH3AP57075 661 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 CYP24A1Q07973 514 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 DSC3Q14574 896 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 TCTN1Q2MV58 587 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 DCAF17Q5H9S7 520 aaPredicted RBP14.56□□□□□ -0.08
CLK4-210ENST00000522136 MIIPQ5JXC2 388 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 TCERG1LQ5VWI1 586 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 DEFB128Q7Z7B8 93 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 ANKRD20A12PQ8NF67 263 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 CCDC127Q96BQ5 260 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 FAM212AQ96EL1 285 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 FAM84AQ96KN4 292 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 MFSD14AQ96MC6 490 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 POP1Q99575 1024 aaKnown RBP14.56□□□□□ -0.08
CLK4-210ENST00000522136 TRIM5Q9C035 493 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 XPO4Q9C0E2 1151 aaKnown RBP14.56□□□□□ -0.08
CLK4-210ENST00000522136 NXF3Q9H4D5 531 aaKnown RBP14.56□□□□□ -0.08
CLK4-210ENST00000522136 METTL14Q9HCE5 456 aaKnown RBP14.56□□□□□ -0.08
CLK4-210ENST00000522136 KIAA1586Q9HCI6 787 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 PDE11AQ9HCR9 933 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 RBAKQ9NYW8 714 aaPredicted RBP14.56□□□□□ -0.08
CLK4-210ENST00000522136 CPSF3Q9UKF6 684 aaKnown RBP14.56□□□□□ -0.08
CLK4-210ENST00000522136 PES1O00541 588 aaKnown RBP14.56□□□□□ -0.08
CLK4-210ENST00000522136 MEFVO15553 781 aaPredicted RBP14.56□□□□□ -0.08
CLK4-210ENST00000522136 ZSCAN20P17040 1043 aaPredicted RBP14.56□□□□□ -0.08
CLK4-210ENST00000522136 IBSPP21815 317 aaPredicted RBP14.56□□□□□ -0.08
CLK4-210ENST00000522136 VAMP7P51809 220 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 BFSP1Q12934 665 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 DCAF4L1Q3SXM0 396 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 SARM1Q6SZW1 724 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 RTN4RL1Q86UN2 441 aaPredicted RBP14.56□□□□□ -0.08
CLK4-210ENST00000522136 DBF4BQ8NFT6 615 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 ADAM2Q99965 735 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 APOL6Q9BWW8 343 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 TRIM6Q9C030 488 aaPredicted RBP14.56□□□□□ -0.08
CLK4-210ENST00000522136 RNF39Q9H2S5 420 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 CHST12Q9NRB3 414 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 INTS13Q9NVM9 706 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 SNTG2Q9NY99 539 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.56□□□□□ -0.08
CLK4-210ENST00000522136 ANK1P16157 1881 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 CITO14578 2027 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 KIAA0355O15063 1070 aa14.55□□□□□ -0.08
CLK4-210ENST00000522136 MAPK13O15264 365 aa14.55□□□□□ -0.08
CLK4-210ENST00000522136 TEX33O43247 280 aa14.55□□□□□ -0.08
CLK4-210ENST00000522136 CXCL8P10145 99 aa14.55□□□□□ -0.08
CLK4-210ENST00000522136 KRT13P13646 458 aa14.55□□□□□ -0.08
CLK4-210ENST00000522136 ENOX2Q16206 610 aaKnown RBP14.55□□□□□ -0.08
CLK4-210ENST00000522136 MAN2A1Q16706 1144 aa14.55□□□□□ -0.08
CLK4-210ENST00000522136 PLEKHG4Q58EX7 1191 aa14.55□□□□□ -0.08
CLK4-210ENST00000522136 C1orf220Q5T0J3 134 aa14.55□□□□□ -0.08
CLK4-210ENST00000522136 INTS8Q75QN2 995 aaKnown RBP14.55□□□□□ -0.08
CLK4-210ENST00000522136 SMG8Q8ND04 991 aaKnown RBP14.55□□□□□ -0.08
CLK4-210ENST00000522136 SLC35C1Q96A29 364 aa14.55□□□□□ -0.08
CLK4-210ENST00000522136 CXCL16Q9H2A7 254 aa14.55□□□□□ -0.08
CLK4-210ENST00000522136 MMRN2Q9H8L6 949 aa14.55□□□□□ -0.08
CLK4-210ENST00000522136 A0A1B0GTH6 734 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 ADCY5O95622 1261 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 TIMP1P01033 207 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 CLTAP09496 248 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 DLATP10515 647 aaKnown RBP14.54□□□□□ -0.08
CLK4-210ENST00000522136 RAG1P15918 1043 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 AKAP5P24588 427 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 GRM5P41594 1212 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 KCNH2Q12809 1159 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 VWA3BQ502W6 1294 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 LMBRD2Q68DH5 695 aaPredicted RBP14.54□□□□□ -0.08
CLK4-210ENST00000522136 BRSK2Q8IWQ3 736 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 PARD3BQ8TEW8 1205 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 LINC01599Q8WXQ3 324 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 VWCEQ96DN2 955 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 CCDC51Q96ER9 411 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 NDST4Q9H3R1 872 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 RPF1Q9H9Y2 349 aaKnown RBP14.54□□□□□ -0.08
CLK4-210ENST00000522136 RTN4Q9NQC3 1192 aaKnown RBP14.54□□□□□ -0.08
CLK4-210ENST00000522136 TOPORSQ9NS56 1045 aaPredicted RBP14.54□□□□□ -0.08
CLK4-210ENST00000522136 FAM105AQ9NUU6 356 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 RNF19AQ9NV58 838 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 IPPQ9Y573 584 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 PCDHB2Q9Y5E7 798 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 LRRIQ3A6PVS8 624 aaPredicted RBP14.54□□□□□ -0.08
CLK4-210ENST00000522136 MEIS3P2A8K0S8 358 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 ZNF75DP51815 510 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 NR1I3Q14994 352 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 PSMD6Q15008 389 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 SLC10A6Q3KNW5 377 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 APBB1IPQ7Z5R6 666 aaPredicted RBP14.54□□□□□ -0.08
CLK4-210ENST00000522136 C7orf61Q8IZ16 206 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 ACAP3Q96P50 834 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 CCDC94Q9BW85 323 aaPredicted RBP14.54□□□□□ -0.08
CLK4-210ENST00000522136 PTPRJQ12913 1337 aa14.54□□□□□ -0.08
CLK4-210ENST00000522136 LGALS16A8MUM7 142 aa14.53□□□□□ -0.08
CLK4-210ENST00000522136 LACTBL1A8MY62 500 aa14.53□□□□□ -0.08
CLK4-210ENST00000522136 CXCL10P02778 98 aa14.53□□□□□ -0.08
CLK4-210ENST00000522136 PPP3CAQ08209 521 aa14.53□□□□□ -0.08
CLK4-210ENST00000522136 TMC2Q8TDI7 906 aa14.53□□□□□ -0.08
CLK4-210ENST00000522136 ZNF516Q92618 1163 aa14.53□□□□□ -0.08
CLK4-210ENST00000522136 LPPQ93052 612 aa14.53□□□□□ -0.08
CLK4-210ENST00000522136 KLK14Q9P0G3 267 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms