RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 POLR3CQ9BUI4 534 aaPredicted RBP23.04■■□□□ 1.28
PABPC1-218ENST00000521865 FZD8Q9H461 694 aa23.04■■□□□ 1.28
PABPC1-218ENST00000521865 SNTG2Q9NY99 539 aa23.04■■□□□ 1.28
PABPC1-218ENST00000521865 FNIP2Q9P278 1114 aa23.04■■□□□ 1.28
PABPC1-218ENST00000521865 ZMYM2Q9UBW7 1377 aa23.03■■□□□ 1.28
PABPC1-218ENST00000521865 STK25O00506 426 aa23.03■■□□□ 1.28
PABPC1-218ENST00000521865 N4BP1O75113 896 aaKnown RBP23.03■■□□□ 1.28
PABPC1-218ENST00000521865 PRKCBP05771 671 aa23.03■■□□□ 1.28
PABPC1-218ENST00000521865 RFX1P22670 979 aa23.03■■□□□ 1.28
PABPC1-218ENST00000521865 ST3GAL1Q11201 340 aa23.03■■□□□ 1.28
PABPC1-218ENST00000521865 CEP57Q86XR8 500 aa23.03■■□□□ 1.28
PABPC1-218ENST00000521865 RSAD2Q8WXG1 361 aa23.03■■□□□ 1.28
PABPC1-218ENST00000521865 PAAF1Q9BRP4 392 aa23.03■■□□□ 1.28
PABPC1-218ENST00000521865 RHOBTB2Q9BYZ6 727 aa23.03■■□□□ 1.28
PABPC1-218ENST00000521865 NT5C3AQ9H0P0 336 aa23.03■■□□□ 1.28
PABPC1-218ENST00000521865 PDZD7Q9H5P4 517 aa23.03■■□□□ 1.28
PABPC1-218ENST00000521865 ZDHHC7Q9NXF8 308 aa23.03■■□□□ 1.28
PABPC1-218ENST00000521865 NARSO43776 548 aaKnown RBP23.02■■□□□ 1.28
PABPC1-218ENST00000521865 CFHP08603 1231 aa23.02■■□□□ 1.28
PABPC1-218ENST00000521865 RPA1P27694 616 aa23.02■■□□□ 1.28
PABPC1-218ENST00000521865 FAM187BQ17R55 369 aa23.02■■□□□ 1.28
PABPC1-218ENST00000521865 HAUS3Q68CZ6 603 aa23.02■■□□□ 1.28
PABPC1-218ENST00000521865 CWF19L1Q69YN2 538 aaKnown RBP23.02■■□□□ 1.28
PABPC1-218ENST00000521865 PRSS55Q6UWB4 352 aaPredicted RBP23.02■■□□□ 1.28
PABPC1-218ENST00000521865 GET4Q7L5D6 327 aaPredicted RBP23.02■■□□□ 1.28
PABPC1-218ENST00000521865 NOSTRINQ8IVI9 506 aa23.02■■□□□ 1.28
PABPC1-218ENST00000521865 GPR65Q8IYL9 337 aa23.02■■□□□ 1.28
PABPC1-218ENST00000521865 ZNF707Q96C28 371 aaPredicted RBP23.02■■□□□ 1.28
PABPC1-218ENST00000521865 MYADMQ96S97 322 aa23.02■■□□□ 1.28
PABPC1-218ENST00000521865 TTLL13PA6NNM8 815 aa23.01■■□□□ 1.27
PABPC1-218ENST00000521865 THP07101 528 aa23.01■■□□□ 1.27
PABPC1-218ENST00000521865 CYP11B2P19099 503 aa23.01■■□□□ 1.27
PABPC1-218ENST00000521865 AOC1P19801 751 aa23.01■■□□□ 1.27
PABPC1-218ENST00000521865 NAMPTP43490 491 aa23.01■■□□□ 1.27
PABPC1-218ENST00000521865 ORC2Q13416 577 aaPredicted RBP23.01■■□□□ 1.27
PABPC1-218ENST00000521865 RTP2Q5QGT7 225 aa23.01■■□□□ 1.27
PABPC1-218ENST00000521865 FAM171A1Q5VUB5 890 aa23.01■■□□□ 1.27
PABPC1-218ENST00000521865 BSNDQ8WZ55 320 aa23.01■■□□□ 1.27
PABPC1-218ENST00000521865 TTPALQ9BTX7 342 aa23.01■■□□□ 1.27
PABPC1-218ENST00000521865 PRKD2Q9BZL6 878 aa23.01■■□□□ 1.27
PABPC1-218ENST00000521865 LIMCH1Q9UPQ0 1083 aa23.01■■□□□ 1.27
PABPC1-218ENST00000521865 USP20Q9Y2K6 914 aa23.01■■□□□ 1.27
PABPC1-218ENST00000521865 RECQL4O94761 1208 aa23■■□□□ 1.27
PABPC1-218ENST00000521865 KIF4AO95239 1232 aa23■■□□□ 1.27
PABPC1-218ENST00000521865 C1RP00736 705 aa23■■□□□ 1.27
PABPC1-218ENST00000521865 PPP2R5AQ15172 486 aa23■■□□□ 1.27
PABPC1-218ENST00000521865 TTC38Q5R3I4 469 aa23■■□□□ 1.27
PABPC1-218ENST00000521865 FAM184AQ8NB25 1140 aa23■■□□□ 1.27
PABPC1-218ENST00000521865 IFT74Q96LB3 600 aa23■■□□□ 1.27
PABPC1-218ENST00000521865 RTP3Q9BQQ7 232 aa23■■□□□ 1.27
PABPC1-218ENST00000521865 FOXP1Q9H334 677 aaPredicted RBP23■■□□□ 1.27
PABPC1-218ENST00000521865 EPS15L1Q9UBC2 864 aa23■■□□□ 1.27
PABPC1-218ENST00000521865 GDAQ9Y2T3 454 aa23■■□□□ 1.27
PABPC1-218ENST00000521865 MYO10Q9HD67 2058 aa23■■□□□ 1.27
PABPC1-218ENST00000521865 DENND4AQ7Z401 1863 aa22.99■■□□□ 1.27
PABPC1-218ENST00000521865 ACKR2O00590 384 aa22.99■■□□□ 1.27
PABPC1-218ENST00000521865 PI15O43692 258 aa22.99■■□□□ 1.27
PABPC1-218ENST00000521865 ZMYND10O75800 440 aa22.99■■□□□ 1.27
PABPC1-218ENST00000521865 NPR3P17342 541 aa22.99■■□□□ 1.27
PABPC1-218ENST00000521865 CCT6AP40227 531 aaKnown RBP22.99■■□□□ 1.27
PABPC1-218ENST00000521865 PSMD5Q16401 504 aa22.99■■□□□ 1.27
PABPC1-218ENST00000521865 LIN9Q5TKA1 542 aa22.99■■□□□ 1.27
PABPC1-218ENST00000521865 LILRA6Q6PI73 481 aa22.99■■□□□ 1.27
PABPC1-218ENST00000521865 KIFC3Q9BVG8 833 aa22.99■■□□□ 1.27
PABPC1-218ENST00000521865 POLD4Q9HCU8 107 aa22.99■■□□□ 1.27
PABPC1-218ENST00000521865 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.99■■□□□ 1.272e-6■■■□□ 15.6
PABPC1-218ENST00000521865 NOL7Q9UMY1 257 aaKnown RBP22.99■■□□□ 1.27
PABPC1-218ENST00000521865 PTGESO14684 152 aa22.98■■□□□ 1.27
PABPC1-218ENST00000521865 SEC24BO95487 1268 aa22.98■■□□□ 1.27
PABPC1-218ENST00000521865 RBM25P49756 843 aaKnown RBP22.98■■□□□ 1.27
PABPC1-218ENST00000521865 SLC44A3Q8N4M1 653 aa22.98■■□□□ 1.27
PABPC1-218ENST00000521865 NXPE3Q969Y0 559 aa22.98■■□□□ 1.27
PABPC1-218ENST00000521865 LLPHQ9BRT6 129 aaKnown RBP22.98■■□□□ 1.27
PABPC1-218ENST00000521865 CCDC113Q9H0I3 377 aa22.98■■□□□ 1.27
PABPC1-218ENST00000521865 WNT16Q9UBV4 365 aa22.98■■□□□ 1.27
PABPC1-218ENST00000521865 CA14Q9ULX7 337 aa22.98■■□□□ 1.27
PABPC1-218ENST00000521865 CACNA1HO95180 2353 aa22.98■■□□□ 1.27
PABPC1-218ENST00000521865 USP34Q70CQ2 3546 aa22.97■■□□□ 1.27
PABPC1-218ENST00000521865 PROB1E7EW31 1015 aa22.97■■□□□ 1.27
PABPC1-218ENST00000521865 LAMP2P13473 410 aa22.97■■□□□ 1.27
PABPC1-218ENST00000521865 NBL1P41271 181 aa22.97■■□□□ 1.27
PABPC1-218ENST00000521865 ELAVL2Q12926 359 aaKnown RBP22.97■■□□□ 1.27
PABPC1-218ENST00000521865 DCAF4L1Q3SXM0 396 aa22.97■■□□□ 1.27
PABPC1-218ENST00000521865 EEF1DP3Q658K8 133 aa22.97■■□□□ 1.27
PABPC1-218ENST00000521865 PIK3R5Q8WYR1 880 aa22.97■■□□□ 1.27
PABPC1-218ENST00000521865 BHMT2Q9H2M3 363 aa22.97■■□□□ 1.27
PABPC1-218ENST00000521865 LRWD1Q9UFC0 647 aa22.97■■□□□ 1.27
PABPC1-218ENST00000521865 POLIQ9UNA4 740 aa22.97■■□□□ 1.27
PABPC1-218ENST00000521865 SRFP11831 508 aa22.96■■□□□ 1.27
PABPC1-218ENST00000521865 MUTP22033 750 aa22.96■■□□□ 1.27
PABPC1-218ENST00000521865 FSHRP23945 695 aa22.96■■□□□ 1.27
PABPC1-218ENST00000521865 EFNA5P52803 228 aa22.96■■□□□ 1.27
PABPC1-218ENST00000521865 HMGN5P82970 282 aaKnown RBP22.96■■□□□ 1.27
PABPC1-218ENST00000521865 PPM1LQ5SGD2 360 aa22.96■■□□□ 1.27
PABPC1-218ENST00000521865 ATF7IP2Q5U623 682 aa22.96■■□□□ 1.27
PABPC1-218ENST00000521865 PDXDC1Q6P996 788 aa22.96■■□□□ 1.27
PABPC1-218ENST00000521865 ASCL5Q7RTU5 278 aa22.96■■□□□ 1.27
PABPC1-218ENST00000521865 APBB1IPQ7Z5R6 666 aaPredicted RBP22.96■■□□□ 1.27
PABPC1-218ENST00000521865 GRASPQ7Z6J2 395 aaPredicted RBP22.96■■□□□ 1.27
PABPC1-218ENST00000521865 FRMD5Q7Z6J6 570 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms