RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 NAP1L5Q96NT1 182 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-208ENST00000520561 HAPLN2Q9GZV7 340 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 HIPK3Q9H422 1215 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 MMRN2Q9H8L6 949 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 RPF1Q9H9Y2 349 aaKnown RBP9.73□□□□□ -0.85
CSMD1-208ENST00000520561 ERVK-5Q9HDB9 667 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 CHST12Q9NRB3 414 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 INTS13Q9NVM9 706 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 ST3GAL5Q9UNP4 418 aa9.73□□□□□ -0.85
CSMD1-208ENST00000520561 A0A1W2PQC6 194 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 FAM189A1O60320 539 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 IL18RAPO95256 599 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 PARNO95453 639 aaKnown RBP9.72□□□□□ -0.85
CSMD1-208ENST00000520561 TPM1P09493 284 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 CLTAP09496 248 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 CLTBP09497 229 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 STAG3L1P0CL83 205 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 CXCL8P10145 99 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 DLATP10515 647 aaKnown RBP9.72□□□□□ -0.85
CSMD1-208ENST00000520561 HOXA11P31270 313 aaPredicted RBP9.72□□□□□ -0.85
CSMD1-208ENST00000520561 CD52P31358 61 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 GTF2H1P32780 548 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 TNFSF9P41273 254 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 MXI1P50539 228 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 RAB27AP51159 221 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 YARSP54577 528 aaKnown RBP9.72□□□□□ -0.85
CSMD1-208ENST00000520561 OSTNP61366 133 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 POU5F1Q01860 360 aaKnown RBP9.72□□□□□ -0.85
CSMD1-208ENST00000520561 CETN1Q12798 172 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 NR1I3Q14994 352 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 SEZ6Q53EL9 994 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 ZBTB41Q5SVQ8 909 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 TRAF7Q6Q0C0 670 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 CRELD2Q6UXH1 353 aaPredicted RBP9.72□□□□□ -0.85
CSMD1-208ENST00000520561 TMC6Q7Z403 805 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 VSTM4Q8IW00 320 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 CEP120Q8N960 986 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 PARD3BQ8TEW8 1205 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 FAM212AQ96EL1 285 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 ACAP3Q96P50 834 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 CGRRF1Q99675 332 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 EIF2AQ9BY44 585 aaKnown RBP9.72□□□□□ -0.85
CSMD1-208ENST00000520561 AGO3Q9H9G7 860 aaKnown RBP9.72□□□□□ -0.85
CSMD1-208ENST00000520561 TOPORSQ9NS56 1045 aaPredicted RBP9.72□□□□□ -0.85
CSMD1-208ENST00000520561 CPSF3Q9UKF6 684 aaKnown RBP9.72□□□□□ -0.85
CSMD1-208ENST00000520561 PADI3Q9ULW8 664 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 ITIH6Q6UXX5 1313 aa9.72□□□□□ -0.85
CSMD1-208ENST00000520561 RALGAPA2Q2PPJ7 1873 aa9.71□□□□□ -0.85
CSMD1-208ENST00000520561 LRRIQ3A6PVS8 624 aaPredicted RBP9.71□□□□□ -0.86
CSMD1-208ENST00000520561 P4HA2O15460 535 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 TEX33O43247 280 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 PTMAP06454 111 aaKnown RBP9.71□□□□□ -0.86
CSMD1-208ENST00000520561 TNNI1P19237 187 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 FMO5P49326 533 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 AP3M2P53677 418 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 FAAP100Q0VG06 881 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 TRIM14Q14142 442 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 SYCP1Q15431 976 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 ENOX2Q16206 610 aaKnown RBP9.71□□□□□ -0.86
CSMD1-208ENST00000520561 LRRC26Q2I0M4 334 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 SPECC1LQ69YQ0 1117 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 FAM43BQ6ZT52 329 aaPredicted RBP9.71□□□□□ -0.86
CSMD1-208ENST00000520561 WDR49Q8IV35 697 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 CD302Q8IX05 232 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 SPC24Q8NBT2 197 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 PLEKHO2Q8TD55 490 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 ERGIC2Q96RQ1 377 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 APOL6Q9BWW8 343 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 FTHL17Q9BXU8 183 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 IFIH1Q9BYX4 1025 aaKnown RBP9.71□□□□□ -0.86
CSMD1-208ENST00000520561 PPP1R12CQ9BZL4 782 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 NXF3Q9H4D5 531 aaKnown RBP9.71□□□□□ -0.86
CSMD1-208ENST00000520561 TMEM8AQ9HCN3 771 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 FAM105AQ9NUU6 356 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 TMEM39AQ9NV64 488 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 TBX21Q9UL17 535 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.71□□□□□ -0.86
CSMD1-208ENST00000520561 PCNTO95613 3336 aa9.71□□□□□ -0.86
CSMD1-208ENST00000520561 HTTP42858 3142 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 GTPBP10A4D1E9 387 aaKnown RBP9.7□□□□□ -0.86
CSMD1-208ENST00000520561 TNNC2P02585 160 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 TMEM191BP0C7N4 346 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 SKIP12755 728 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 EN2P19622 333 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-208ENST00000520561 PBX1P40424 430 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 GCLMP48507 274 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 DLG4P78352 724 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 BIRC3Q13489 604 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 MBTPS1Q14703 1052 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 EXOC3L4Q17RC7 722 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 UBXN11Q5T124 520 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 KRT39Q6A163 491 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 GBP6Q6ZN66 633 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 SEPT8Q92599 483 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 APBB2Q92870 758 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 IQCDQ96DY2 449 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 ANKRD36BP1Q96IX9 119 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 PDLIM2Q96JY6 352 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 NUP58Q9BVL2 599 aa9.7□□□□□ -0.86
CSMD1-208ENST00000520561 LSM14BQ9BX40 385 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms