RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 CHST7Q9NS84 486 aa12.01□□□□□ -0.49
PVT1-208ENST00000519481 FNIP2Q9P278 1114 aa12.01□□□□□ -0.49
PVT1-208ENST00000519481 IGSF9Q9P2J2 1179 aa12.01□□□□□ -0.49
PVT1-208ENST00000519481 FBXL21Q9UKT6 434 aa12.01□□□□□ -0.49
PVT1-208ENST00000519481 CACNA1HO95180 2353 aa12.01□□□□□ -0.49
PVT1-208ENST00000519481 SF3B1O75533 1304 aaKnown RBP eCLIP12.01□□□□□ -0.49
PVT1-208ENST00000519481 ACKR2O00590 384 aa12□□□□□ -0.49
PVT1-208ENST00000519481 PDGFBP01127 241 aaPredicted RBP12□□□□□ -0.49
PVT1-208ENST00000519481 THP07101 528 aa12□□□□□ -0.49
PVT1-208ENST00000519481 CCT6AP40227 531 aaKnown RBP12□□□□□ -0.49
PVT1-208ENST00000519481 EFNA5P52803 228 aa12□□□□□ -0.49
PVT1-208ENST00000519481 ELAVL2Q12926 359 aaKnown RBP12□□□□□ -0.49
PVT1-208ENST00000519481 ASTLQ6HA08 431 aaPredicted RBP12□□□□□ -0.49
PVT1-208ENST00000519481 PALB2Q86YC2 1186 aa12□□□□□ -0.49
PVT1-208ENST00000519481 NOSTRINQ8IVI9 506 aa12□□□□□ -0.49
PVT1-208ENST00000519481 FBXO18Q8NFZ0 1043 aa12□□□□□ -0.49
PVT1-208ENST00000519481 KIFAP3Q92845 792 aa12□□□□□ -0.49
PVT1-208ENST00000519481 GPR62Q9BZJ7 368 aa12□□□□□ -0.49
PVT1-208ENST00000519481 WDR6Q9NNW5 1121 aaKnown RBP12□□□□□ -0.49
PVT1-208ENST00000519481 ZDHHC7Q9NXF8 308 aa12□□□□□ -0.49
PVT1-208ENST00000519481 LRWD1Q9UFC0 647 aa12□□□□□ -0.49
PVT1-208ENST00000519481 TDRD15B5MCY1 1934 aaKnown RBP11.99□□□□□ -0.49
PVT1-208ENST00000519481 WDFY4Q6ZS81 3184 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 F8W810 466 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 GALR2O43603 387 aaPredicted RBP11.99□□□□□ -0.49
PVT1-208ENST00000519481 RECQL4O94761 1208 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 EFEMP2O95967 443 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 MYBP10242 640 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 RFX1P22670 979 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 FXR2P51116 673 aaKnown RBP eCLIP11.99□□□□□ -0.49
PVT1-208ENST00000519481 CLCN5P51795 746 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 ST3GAL1Q11201 340 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 DCAF4L1Q3SXM0 396 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 PDXDC1Q6P996 788 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 GLYCTKQ8IVS8 523 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 GSTCDQ8NEC7 633 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 FLCNQ8NFG4 579 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 NXPE3Q969Y0 559 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 TTPALQ9BTX7 342 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 SMOC2Q9H3U7 446 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 PDZD7Q9H5P4 517 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 KCNK12Q9HB15 430 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 SNTG2Q9NY99 539 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 DUSP12Q9UNI6 340 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 KIF3AQ9Y496 699 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 CLUHO75153 1309 aa11.99□□□□□ -0.49
PVT1-208ENST00000519481 PHLPP2Q6ZVD8 1323 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 CASTOR2A6NHX0 329 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 H0Y858 1186 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 TGM5O43548 720 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 RFPL2O75678 378 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 SEC24BO95487 1268 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 SPATA31D3P0C874 917 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 PDIA5Q14554 519 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 LIN9Q5TKA1 542 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 FAM171A1Q5VUB5 890 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 SPATA31D4Q6ZUB0 917 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 CEP57Q86XR8 500 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 RABGGTAQ92696 567 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 B3GALT6Q96L58 329 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 PHOX2BQ99453 314 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 PRKD2Q9BZL6 878 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 NT5C3AQ9H0P0 336 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 BHMT2Q9H2M3 363 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 FAM86C1Q9NVL1 165 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.98□□□□□ -0.492e-8■■□□□ 12.1
PVT1-208ENST00000519481 KIAA1024Q9UPX6 916 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 DNM3Q9UQ16 869 aa11.98□□□□□ -0.49
PVT1-208ENST00000519481 KMT2EQ8IZD2 1858 aa11.97□□□□□ -0.49
PVT1-208ENST00000519481 K7ERI5 159 aa11.97□□□□□ -0.49
PVT1-208ENST00000519481 STK25O00506 426 aa11.97□□□□□ -0.49
PVT1-208ENST00000519481 ST18O60284 1047 aa11.97□□□□□ -0.49
PVT1-208ENST00000519481 ZMYND10O75800 440 aa11.97□□□□□ -0.49
PVT1-208ENST00000519481 RPL17P18621 184 aaKnown RBP11.97□□□□□ -0.49
PVT1-208ENST00000519481 PSMD5Q16401 504 aa11.97□□□□□ -0.49
PVT1-208ENST00000519481 ATF7IP2Q5U623 682 aa11.97□□□□□ -0.49
PVT1-208ENST00000519481 KRT79Q5XKE5 535 aa11.97□□□□□ -0.49
PVT1-208ENST00000519481 LILRA6Q6PI73 481 aa11.97□□□□□ -0.49
PVT1-208ENST00000519481 TMEM105Q8N8V8 129 aa11.97□□□□□ -0.49
PVT1-208ENST00000519481 FEZF2Q8TBJ5 459 aa11.97□□□□□ -0.49
PVT1-208ENST00000519481 SNX29Q8TEQ0 813 aa11.97□□□□□ -0.49
PVT1-208ENST00000519481 HASPINQ8TF76 798 aa11.97□□□□□ -0.49
PVT1-208ENST00000519481 PIK3R5Q8WYR1 880 aa11.97□□□□□ -0.49
PVT1-208ENST00000519481 BSNDQ8WZ55 320 aa11.97□□□□□ -0.49
PVT1-208ENST00000519481 RTP3Q9BQQ7 232 aa11.97□□□□□ -0.49
PVT1-208ENST00000519481 CCDC113Q9H0I3 377 aa11.97□□□□□ -0.49
PVT1-208ENST00000519481 DDX19AQ9NUU7 478 aaKnown RBP11.97□□□□□ -0.49
PVT1-208ENST00000519481 EPS15L1Q9UBC2 864 aa11.97□□□□□ -0.49
PVT1-208ENST00000519481 GDAQ9Y2T3 454 aa11.97□□□□□ -0.49
PVT1-208ENST00000519481 DENND4AQ7Z401 1863 aa11.96□□□□□ -0.49
PVT1-208ENST00000519481 CCDC169A6NNP5 214 aa11.96□□□□□ -0.49
PVT1-208ENST00000519481 LAD1O00515 517 aa11.96□□□□□ -0.49
PVT1-208ENST00000519481 PTGESO14684 152 aa11.96□□□□□ -0.49
PVT1-208ENST00000519481 TRAPPC3O43617 180 aa11.96□□□□□ -0.49
PVT1-208ENST00000519481 GFRA3O60609 400 aa11.96□□□□□ -0.49
PVT1-208ENST00000519481 KIF4AO95239 1232 aa11.96□□□□□ -0.49
PVT1-208ENST00000519481 HNRNPA1P09651 372 aaKnown RBP eCLIP11.96□□□□□ -0.49
PVT1-208ENST00000519481 YARSP54577 528 aaKnown RBP11.96□□□□□ -0.49
PVT1-208ENST00000519481 PTGDRQ13258 359 aa11.96□□□□□ -0.49
PVT1-208ENST00000519481 RTP2Q5QGT7 225 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms