RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 COLEC11Q9BWP8 271 aa20.47■□□□□ 0.87
FAM49B-208ENST00000518344 CXCL16Q9H2A7 254 aa20.47■□□□□ 0.87
FAM49B-208ENST00000518344 ANKFY1Q9P2R3 1169 aa20.47■□□□□ 0.87
FAM49B-208ENST00000518344 PCDHA7Q9UN72 937 aa20.47■□□□□ 0.87
FAM49B-208ENST00000518344 PLXNA4Q9HCM2 1894 aa20.47■□□□□ 0.87
FAM49B-208ENST00000518344 XIRP2A4UGR9 3374 aa20.46■□□□□ 0.87
FAM49B-208ENST00000518344 TOM1L1O75674 476 aa20.46■□□□□ 0.87
FAM49B-208ENST00000518344 THP07101 528 aa20.46■□□□□ 0.87
FAM49B-208ENST00000518344 MCF2P10911 925 aa20.46■□□□□ 0.87
FAM49B-208ENST00000518344 NMT1P30419 496 aaKnown RBP20.46■□□□□ 0.87
FAM49B-208ENST00000518344 LTBRP36941 435 aa20.46■□□□□ 0.87
FAM49B-208ENST00000518344 NDUFV1P49821 464 aa20.46■□□□□ 0.87
FAM49B-208ENST00000518344 YARSP54577 528 aaKnown RBP20.46■□□□□ 0.87
FAM49B-208ENST00000518344 DLX2Q07687 328 aaPredicted RBP20.46■□□□□ 0.87
FAM49B-208ENST00000518344 COL19A1Q14993 1142 aa20.46■□□□□ 0.87
FAM49B-208ENST00000518344 LEXMQ3ZCV2 418 aa20.46■□□□□ 0.87
FAM49B-208ENST00000518344 AXDND1Q5T1B0 1012 aaPredicted RBP20.46■□□□□ 0.87
FAM49B-208ENST00000518344 EFHBQ8N7U6 833 aa20.46■□□□□ 0.87
FAM49B-208ENST00000518344 CEP120Q8N960 986 aa20.46■□□□□ 0.87
FAM49B-208ENST00000518344 MRPL43Q8N983 215 aaKnown RBP20.46■□□□□ 0.87
FAM49B-208ENST00000518344 AUTS2Q8WXX7 1259 aa20.46■□□□□ 0.87
FAM49B-208ENST00000518344 RABGGTAQ92696 567 aa20.46■□□□□ 0.87
FAM49B-208ENST00000518344 ZBP1Q9H171 429 aa20.46■□□□□ 0.87
FAM49B-208ENST00000518344 RCOR1Q9UKL0 485 aa20.46■□□□□ 0.87
FAM49B-208ENST00000518344 TBX20Q9UMR3 447 aa20.46■□□□□ 0.87
FAM49B-208ENST00000518344 ZMYM2Q9UBW7 1377 aa20.46■□□□□ 0.87
FAM49B-208ENST00000518344 PTGESO14684 152 aa20.45■□□□□ 0.86
FAM49B-208ENST00000518344 CLDN3O15551 220 aa20.45■□□□□ 0.86
FAM49B-208ENST00000518344 PROZP22891 400 aa20.45■□□□□ 0.86
FAM49B-208ENST00000518344 GRM5P41594 1212 aa20.45■□□□□ 0.86
FAM49B-208ENST00000518344 CLUL1Q15846 466 aa20.45■□□□□ 0.86
FAM49B-208ENST00000518344 DUSP6Q16828 381 aa20.45■□□□□ 0.86
FAM49B-208ENST00000518344 ZPBP2Q6X784 338 aa20.45■□□□□ 0.86
FAM49B-208ENST00000518344 TMEM87AQ8NBN3 555 aa20.45■□□□□ 0.86
FAM49B-208ENST00000518344 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.45■□□□□ 0.86
FAM49B-208ENST00000518344 ADAMTS19Q8TE59 1207 aa20.45■□□□□ 0.86
FAM49B-208ENST00000518344 STAMQ92783 540 aa20.45■□□□□ 0.86
FAM49B-208ENST00000518344 CHAMP1Q96JM3 812 aa20.45■□□□□ 0.86
FAM49B-208ENST00000518344 VN1R3Q9BXE9 311 aa20.45■□□□□ 0.86
FAM49B-208ENST00000518344 MARCH5Q9NX47 278 aa20.45■□□□□ 0.86
FAM49B-208ENST00000518344 CACNG4Q9UBN1 327 aa20.45■□□□□ 0.86
FAM49B-208ENST00000518344 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.44■□□□□ 0.86
FAM49B-208ENST00000518344 C2orf71A6NGG8 1288 aa20.44■□□□□ 0.86
FAM49B-208ENST00000518344 F8W810 466 aa20.44■□□□□ 0.86
FAM49B-208ENST00000518344 ABLIM1O14639 778 aa20.44■□□□□ 0.86
FAM49B-208ENST00000518344 TBX10O75333 385 aa20.44■□□□□ 0.86
FAM49B-208ENST00000518344 CTSAP10619 480 aa20.44■□□□□ 0.86
FAM49B-208ENST00000518344 IDEP14735 1019 aa20.44■□□□□ 0.86
FAM49B-208ENST00000518344 SCP2P22307 547 aa20.44■□□□□ 0.86
FAM49B-208ENST00000518344 LIG4P49917 911 aa20.44■□□□□ 0.86
FAM49B-208ENST00000518344 GLRA4Q5JXX5 417 aa20.44■□□□□ 0.86
FAM49B-208ENST00000518344 PTCRAQ6ISU1 281 aaPredicted RBP20.44■□□□□ 0.86
FAM49B-208ENST00000518344 SFR1Q86XK3 245 aa20.44■□□□□ 0.86
FAM49B-208ENST00000518344 DHX58Q96C10 678 aa20.44■□□□□ 0.86
FAM49B-208ENST00000518344 ACAP3Q96P50 834 aa20.44■□□□□ 0.86
FAM49B-208ENST00000518344 CDCA3Q99618 268 aaPredicted RBP20.44■□□□□ 0.86
FAM49B-208ENST00000518344 FAM13BQ9NYF5 915 aa20.44■□□□□ 0.86
FAM49B-208ENST00000518344 CASTOR2A6NHX0 329 aa20.43■□□□□ 0.86
FAM49B-208ENST00000518344 HNRNPDLO14979 420 aaKnown RBP20.43■□□□□ 0.86
FAM49B-208ENST00000518344 KRT85P78386 507 aa20.43■□□□□ 0.86
FAM49B-208ENST00000518344 RBM10P98175 930 aaKnown RBP20.43■□□□□ 0.86
FAM49B-208ENST00000518344 TUSC3Q13454 348 aa20.43■□□□□ 0.86
FAM49B-208ENST00000518344 NOLC1Q14978 699 aaKnown RBP eCLIP20.43■□□□□ 0.86
FAM49B-208ENST00000518344 SEZ6Q53EL9 994 aa20.43■□□□□ 0.86
FAM49B-208ENST00000518344 ZC2HC1CQ53FD0 456 aaPredicted RBP20.43■□□□□ 0.86
FAM49B-208ENST00000518344 LLGL2Q6P1M3 1020 aa20.43■□□□□ 0.86
FAM49B-208ENST00000518344 IQUBQ8NA54 791 aa20.43■□□□□ 0.86
FAM49B-208ENST00000518344 DNAJC19Q96DA6 116 aa20.43■□□□□ 0.86
FAM49B-208ENST00000518344 FIZ1Q96SL8 496 aa20.43■□□□□ 0.86
FAM49B-208ENST00000518344 PAAF1Q9BRP4 392 aa20.43■□□□□ 0.86
FAM49B-208ENST00000518344 TOPORSQ9NS56 1045 aaPredicted RBP20.43■□□□□ 0.86
FAM49B-208ENST00000518344 TBC1D7Q9P0N9 293 aa20.43■□□□□ 0.86
FAM49B-208ENST00000518344 STK39Q9UEW8 545 aa20.43■□□□□ 0.86
FAM49B-208ENST00000518344 POLR2DO15514 142 aaKnown RBP20.42■□□□□ 0.86
FAM49B-208ENST00000518344 TADA2AO75478 443 aa20.42■□□□□ 0.86
FAM49B-208ENST00000518344 GAP43P17677 238 aa20.42■□□□□ 0.86
FAM49B-208ENST00000518344 GTF2BQ00403 316 aa20.42■□□□□ 0.86
FAM49B-208ENST00000518344 HSP90AA2PQ14568 343 aaPredicted RBP20.42■□□□□ 0.86
FAM49B-208ENST00000518344 E2F4Q16254 413 aa20.42■□□□□ 0.86
FAM49B-208ENST00000518344 PUS10Q3MIT2 529 aaKnown RBP20.42■□□□□ 0.86
FAM49B-208ENST00000518344 HERC4Q5GLZ8 1057 aaPredicted RBP20.42■□□□□ 0.86
FAM49B-208ENST00000518344 TAS1R1Q7RTX1 841 aa20.42■□□□□ 0.86
FAM49B-208ENST00000518344 ZNF720Q7Z2F6 126 aa20.42■□□□□ 0.86
FAM49B-208ENST00000518344 VN1R2Q8NFZ6 395 aa20.42■□□□□ 0.86
FAM49B-208ENST00000518344 KCNN1Q92952 543 aa20.42■□□□□ 0.86
FAM49B-208ENST00000518344 SPATA32Q96LK8 384 aa20.42■□□□□ 0.86
FAM49B-208ENST00000518344 NECAB3Q96P71 396 aaPredicted RBP20.42■□□□□ 0.86
FAM49B-208ENST00000518344 UHRF1Q96T88 793 aaPredicted RBP20.42■□□□□ 0.86
FAM49B-208ENST00000518344 LRRC27Q9C0I9 530 aa20.42■□□□□ 0.86
FAM49B-208ENST00000518344 CUEDC2Q9H467 287 aa20.42■□□□□ 0.86
FAM49B-208ENST00000518344 MRPL44Q9H9J2 332 aaKnown RBP20.42■□□□□ 0.86
FAM49B-208ENST00000518344 CLEC1BQ9P126 229 aa20.42■□□□□ 0.86
FAM49B-208ENST00000518344 BARX2Q9UMQ3 279 aaPredicted RBP20.42■□□□□ 0.86
FAM49B-208ENST00000518344 ATP6V1DQ9Y5K8 247 aa20.42■□□□□ 0.86
FAM49B-208ENST00000518344 FSD2A1L4K1 749 aa20.41■□□□□ 0.86
FAM49B-208ENST00000518344 GRXCR2A6NFK2 248 aa20.41■□□□□ 0.86
FAM49B-208ENST00000518344 C2CD2LO14523 706 aa20.41■□□□□ 0.86
FAM49B-208ENST00000518344 GLP2RO95838 553 aa20.41■□□□□ 0.86
FAM49B-208ENST00000518344 SOD2P04179 222 aa20.41■□□□□ 0.86
FAM49B-208ENST00000518344 ABCD1P33897 745 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms