RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 WWC2Q6AWC2 1192 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 SCARA3Q6AZY7 606 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 PSAPL1Q6NUJ1 521 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 FBXO46Q6PJ61 603 aaPredicted RBP3.12□□□□□ -1.91
SKP1-204ENST00000517691 BTNL9Q6UXG8 535 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 RUFY4Q6ZNE9 571 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 MMS22LQ6ZRQ5 1243 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 ZBTB46Q86UZ6 589 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 MICU3Q86XE3 530 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 RIOX2Q8IUF8 465 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 ZDHHC13Q8IUH4 622 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 PASD1Q8IV76 773 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 SYNPOQ8N3V7 929 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 FANCBQ8NB91 859 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 RSPH1Q8WYR4 309 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 RRP36Q96EU6 259 aaKnown RBP3.12□□□□□ -1.91
SKP1-204ENST00000517691 SCLT1Q96NL6 688 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 CLUHP3Q96NS8 147 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 FERD3LQ96RJ6 166 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 TSPAN18Q96SJ8 248 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 EIF2AK1Q9BQI3 630 aaKnown RBP3.12□□□□□ -1.91
SKP1-204ENST00000517691 HERPUD2Q9BSE4 406 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 C22orf23Q9BZE7 217 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 NRSN2Q9GZP1 204 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 MROH8Q9H579 483 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 CBX8Q9HC52 389 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 OSGEPQ9NPF4 335 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 SRRDQ9UH36 339 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 IP6K2Q9UHH9 426 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 GTF2IRD1Q9UHL9 959 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 ADAMTS5Q9UNA0 930 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 RIPK3Q9Y572 518 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 PCDHB14Q9Y5E9 798 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 OTOFQ9HC10 1997 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 DOCK1Q14185 1865 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 WDR19Q8NEZ3 1342 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 CDK5RAP2Q96SN8 1893 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 hCG_1642624A0A1W2PR95 340 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 PTPDC1A2A3K4 754 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 GOLGA8AA7E2F4 631 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 GABRDO14764 452 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 SNX2O60749 519 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 ABLIM3O94929 683 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 PLEKHA8P1O95397 391 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 ECEL1O95672 775 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 ICAM1P05362 532 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 GSTP1P09211 210 aaKnown RBP3.12□□□□□ -1.91
SKP1-204ENST00000517691 SNHG28P0DPA3 235 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 CALML3P27482 149 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 METAP2P50579 478 aaKnown RBP eCLIP3.12□□□□□ -1.91
SKP1-204ENST00000517691 OAZ1P54368 228 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 PRMT2P55345 433 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 CCT2P78371 535 aaKnown RBP3.12□□□□□ -1.91
SKP1-204ENST00000517691 AKAP17AQ02040 695 aaKnown RBP3.12□□□□□ -1.91
SKP1-204ENST00000517691 RPL6Q02878 288 aaKnown RBP3.12□□□□□ -1.91
SKP1-204ENST00000517691 GALEQ14376 348 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 ANKRD1Q15327 319 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 PPP2R5EQ16537 467 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 CDC37Q16543 378 aaPredicted RBP3.12□□□□□ -1.91
SKP1-204ENST00000517691 QRICH1Q2TAL8 776 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 MUM1L1Q5H9M0 696 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 HYIQ5T013 277 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 FBXW10Q5XX13 1052 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 MRM1Q6IN84 353 aaKnown RBP3.12□□□□□ -1.91
SKP1-204ENST00000517691 PPP4R3AQ6IN85 833 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 GDF6Q6KF10 455 aaPredicted RBP3.12□□□□□ -1.91
SKP1-204ENST00000517691 CNNM4Q6P4Q7 775 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 CFAP161Q6P656 301 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 C1orf228Q6PIY5 440 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 APOA5Q6Q788 366 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 NSMFQ6X4W1 530 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 C20orf204Q6ZNR8 217 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 SGMS1Q86VZ5 419 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 ZSCAN30Q86W11 494 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 FBXO11Q86XK2 927 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 SRBD1Q8N5C6 995 aaKnown RBP3.12□□□□□ -1.91
SKP1-204ENST00000517691 SHCBP1Q8NEM2 672 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 CHST13Q8NET6 341 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 REPS2Q8NFH8 660 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 RIN3Q8TB24 985 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 COG1Q8WTW3 980 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 ATXN2LQ8WWM7 1075 aaKnown RBP3.12□□□□□ -1.91
SKP1-204ENST00000517691 SOCS4Q8WXH5 440 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 ABHD8Q96I13 439 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 PIGSQ96S52 555 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 ELAC2Q9BQ52 826 aaKnown RBP3.12□□□□□ -1.91
SKP1-204ENST00000517691 LZTS2Q9BRK4 669 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 EMILIN2Q9BXX0 1053 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 TM6SF1Q9BZW5 370 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 RANBP17Q9H2T7 1088 aaKnown RBP3.12□□□□□ -1.91
SKP1-204ENST00000517691 ACAD9Q9H845 621 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 JMJD4Q9H9V9 463 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 PLCB1Q9NQ66 1216 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 RNF146Q9NTX7 359 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 RBM28Q9NW13 759 aaKnown RBP3.12□□□□□ -1.91
SKP1-204ENST00000517691 SEC63Q9UGP8 760 aaKnown RBP3.12□□□□□ -1.91
SKP1-204ENST00000517691 FBXO40Q9UH90 709 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 DDX20Q9UHI6 824 aaKnown RBP3.12□□□□□ -1.91
SKP1-204ENST00000517691 GJD2Q9UKL4 321 aa3.12□□□□□ -1.91
SKP1-204ENST00000517691 ZNF214Q9UL59 606 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms