RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 AGAP11Q8TF27 550 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 ASB11Q8WXH4 323 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 DNAJC9Q8WXX5 260 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 MAML1Q92585 1016 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 CDKL2Q92772 493 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 VMP1Q96GC9 406 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 ATP6V1G3Q96LB4 118 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 GPR101Q96P66 508 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 WDR24Q96S15 920 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 API5Q9BZZ5 524 aaKnown RBP5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 EPB41L1Q9H4G0 881 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 ATP8A2Q9NTI2 1148 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 FAIMQ9NVQ4 179 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 DLGAP2Q9P1A6 1054 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 RNF14Q9UBS8 474 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 GTF2IRD1Q9UHL9 959 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 SLC12A4Q9UP95 1085 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 EFR3BQ9Y2G0 817 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 FANCAO15360 1455 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 PDS5AQ29RF7 1337 aaKnown RBP5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 WDR62O43379 1518 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 CARMIL1Q5VZK9 1371 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 PCF11O94913 1555 aaKnown RBP5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 EIF2AK4Q9P2K8 1649 aaKnown RBP5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 CPSF1Q10570 1443 aaKnown RBP5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 MED14O60244 1454 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 ARHGAP10A1A4S6 786 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 ANO9A1A5B4 782 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 DYTNA2CJ06 578 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 PRAMEF27A3QJZ7 478 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 CFAP69A5D8W1 941 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 CENPBD1B2RD01 187 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 AGPSO00116 658 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 SNX2O60749 519 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 ALDH1L1O75891 902 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 ESRRBO95718 433 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 EOMESO95936 686 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 KRT14P02533 472 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 ALDH2P05091 517 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 ITGA2BP08514 1039 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 CYP2C9P11712 490 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 GSPT1P15170 499 aaKnown RBP5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 GJB2P29033 226 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 KRT6CP48668 564 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 CDK8P49336 464 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 MXI1P50539 228 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 PEX5P50542 639 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 HNRNPMP52272 730 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 CTAG1AP78358 180 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 MECOMQ03112 1051 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 ZP2Q05996 745 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 NMIQ13287 307 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 INPP5AQ14642 412 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 KIF22Q14807 665 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 R3HDM1Q15032 1099 aaKnown RBP5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 PARP6Q2NL67 630 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 C15orf59Q2T9L4 293 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 FBLN7Q53RD9 439 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 ZNF569Q5MCW4 686 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 AGBL2Q5U5Z8 902 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 SPATA1Q5VX52 437 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 TWF2Q6IBS0 349 aaKnown RBP5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 OR52E8Q6IFG1 317 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 LRFN4Q6PJG9 635 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 RASGRP2Q7LDG7 609 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 KRT28Q7Z3Y7 464 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 EXOC3L1Q86VI1 746 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 SPATA24Q86W54 205 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 PPFIBP1Q86W92 1011 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 CILP2Q8IUL8 1156 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 CNGA4Q8IV77 575 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 KSR1Q8IVT5 923 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 IFT20Q8IY31 132 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 SAMD14Q8IZD0 417 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 ST13P4Q8IZP2 240 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 MMGT1Q8N4V1 131 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 MREGQ8N565 214 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 DDHD1Q8NEL9 900 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 LINS1Q8NG48 757 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 AENQ8WTP8 325 aaKnown RBP5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 DPF3Q92784 378 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 AZIN2Q96A70 460 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 DGCR14Q96DF8 476 aaKnown RBP5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 PLPPR2Q96GM1 343 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 CRELD1Q96HD1 420 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 MED30Q96HR3 178 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 CCDC42Q96M95 316 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 PRPF18Q99633 342 aaKnown RBP5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 HAUS8Q9BT25 410 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 HGH1Q9BTY7 390 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 SPATA16Q9BXB7 569 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 SPZ1Q9BXG8 430 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 UNKQ9C0B0 810 aaKnown RBP5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 VPS16Q9H269 839 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 EPC1Q9H2F5 836 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 TAF1DQ9H5J8 278 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 DCLRE1BQ9H816 532 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 PFDN4Q9NQP4 134 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 RHBDL2Q9NX52 303 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 PTTG2Q9NZH5 202 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms