RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ARHGEF18Q6ZSZ5 1173 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 RSPH3Q86UC2 560 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 JAMLQ86YT9 394 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 HOMEZQ8IX15 550 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 GRIN2DO15399 1336 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 EXOC1LA0A1B0GW35 172 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 CAND2O75155 1236 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 SSTR3P32745 418 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 GPC5P78333 572 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 KCNMA1Q12791 1236 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 TAF11Q15544 211 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 LRRC55Q6ZSA7 311 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 YTHDF3Q7Z739 585 aaKnown RBP11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 RHPN2Q8IUC4 686 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 TRIM59Q8IWR1 403 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 GBP7Q8N8V2 638 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 ZKSCAN4Q969J2 545 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 RNF25Q96BH1 459 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 ERP44Q9BS26 406 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 NOD2Q9HC29 1040 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 PCDHGC5Q9Y5F6 944 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 LUC7L3O95232 432 aaKnown RBP11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 AGTP01019 485 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 OATP04181 439 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 MSH2P43246 934 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 STRIP1Q5VSL9 837 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 HSPH1Q92598 858 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 REEP2Q9BRK0 252 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 INTS2Q9H0H0 1204 aaKnown RBP11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 DBR1Q9UK59 544 aaKnown RBP11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 BAG2O95816 211 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 LDHAP00338 332 aaKnown RBP11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 PSMA2P25787 234 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 ECE1P42892 770 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 SLC15A2Q16348 729 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 ZNF568Q3ZCX4 644 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 C3orf67Q6ZVT6 689 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 C16orf86Q6ZW13 317 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 TRPM8Q7Z2W7 1104 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 KCNK18Q7Z418 384 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 EMSYQ7Z589 1322 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 TXNRD3Q86VQ6 643 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 LRRC34Q8IZ02 419 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 PSPC1Q8WXF1 523 aaKnown RBP11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 DDX23Q9BUQ8 820 aaKnown RBP11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 RPAP3Q9H6T3 665 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 TRAPPC3O43617 180 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 SLC4A1P02730 911 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 PON1P27169 355 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 ANXA13P27216 316 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 PSMC5P62195 406 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 MTMR2Q13614 643 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 SLC29A2Q14542 456 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 RAPH1Q70E73 1250 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 AIPL1Q9NZN9 384 aa11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 TTC7AQ9ULT0 858 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA1-202ENST00000517417 TCP11X1B4DZS4 312 aa11.52□□□□□ -0.56
PCDHGA1-202ENST00000517417 F8VZ95 297 aa11.52□□□□□ -0.56
PCDHGA1-202ENST00000517417 GRIN3BO60391 1043 aa11.52□□□□□ -0.56
PCDHGA1-202ENST00000517417 MUM1Q2TAK8 710 aa11.52□□□□□ -0.56
PCDHGA1-202ENST00000517417 FAM47EQ6ZV65 393 aa11.52□□□□□ -0.56
PCDHGA1-202ENST00000517417 TMEM35BQ8NCS4 154 aa11.52□□□□□ -0.56
PCDHGA1-202ENST00000517417 CFAP61Q8NHU2 1237 aa11.52□□□□□ -0.56
PCDHGA1-202ENST00000517417 SCFD1Q8WVM8 642 aa11.52□□□□□ -0.56
PCDHGA1-202ENST00000517417 FBXO40Q9UH90 709 aa11.52□□□□□ -0.56
PCDHGA1-202ENST00000517417 CYP11B2P19099 503 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 CA4P22748 312 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 IRX4P78413 519 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 RCN2Q14257 317 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 TMC3Q7Z5M5 1100 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 SIX6OS1Q8N1H7 587 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 KCNV2Q8TDN2 545 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 CCDC68Q9H2F9 335 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 ZNF302Q9NR11 478 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 PCSK1NQ9UHG2 260 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 PCDHA10Q9Y5I2 948 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 ADAMTS7Q9UKP4 1686 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 PDIK1LQ8N165 341 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 INPP4AQ96PE3 977 aaPredicted RBP11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 VCX3BQ9H321 246 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 TXLNGQ9NUQ3 528 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 PRR12Q9ULL5 1215 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 SUGT1Q9Y2Z0 365 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 PHF2O75151 1096 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 FGRP09769 529 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 ABCD1P33897 745 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 BAATQ14032 418 aaPredicted RBP11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 HP1BP3Q5SSJ5 553 aaPredicted RBP11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 MMTAG2Q9BU76 263 aaKnown RBP11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 FAM129AQ9BZQ8 928 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 SEL1LQ9UBV2 794 aa11.52□□□□□ -0.57
PCDHGA1-202ENST00000517417 EYA4O95677 639 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 MT-ND3P03897 115 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 ZNF699Q32M78 642 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 KRT39Q6A163 491 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 SCYL3Q8IZE3 742 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 FUKQ8N0W3 1084 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 PYROXD1Q8WU10 500 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 JMJD4Q9H9V9 463 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 OSGEPQ9NPF4 335 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms