RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 FPR1P21462 350 aa7.1□□□□□ -1.27
SCARNA1-201ENST00000517138 ECHS1P30084 290 aa7.1□□□□□ -1.27
SCARNA1-201ENST00000517138 CLUL1Q15846 466 aa7.1□□□□□ -1.27
SCARNA1-201ENST00000517138 ANO4Q32M45 955 aa7.1□□□□□ -1.27
SCARNA1-201ENST00000517138 PGM2L1Q6PCE3 622 aa7.1□□□□□ -1.27
SCARNA1-201ENST00000517138 ZNF627Q7L945 461 aa7.1□□□□□ -1.27
SCARNA1-201ENST00000517138 PQLC1Q8N2U9 271 aa7.1□□□□□ -1.27
SCARNA1-201ENST00000517138 ZNF483Q8TF39 744 aaPredicted RBP7.1□□□□□ -1.27
SCARNA1-201ENST00000517138 PAWRQ96IZ0 340 aaKnown RBP7.1□□□□□ -1.27
SCARNA1-201ENST00000517138 NDC1Q9BTX1 674 aa7.1□□□□□ -1.27
SCARNA1-201ENST00000517138 BCO1Q9HAY6 547 aa7.1□□□□□ -1.27
SCARNA1-201ENST00000517138 TUBD1Q9UJT1 453 aa7.1□□□□□ -1.27
SCARNA1-201ENST00000517138 DNM3Q9UQ16 869 aa7.1□□□□□ -1.27
SCARNA1-201ENST00000517138 TRIM75PA6NK02 468 aa7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 PRR5-ARHGAP8B1AHC4 643 aa7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 FZD9O00144 591 aa7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 GABRDO14764 452 aa7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 ALOX15P16050 662 aaPredicted RBP7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 FLT3LGP49771 235 aa7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 SLC5A3P53794 718 aa7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 ITKQ08881 620 aa7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 BMT2Q1RMZ1 405 aa7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 METTL24Q5JXM2 366 aa7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 ZNF572Q7Z3I7 529 aaPredicted RBP7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 ZNF276Q8N554 614 aa7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 OR10H5Q8NGA6 315 aa7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 JADE3Q92613 823 aa7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 LARP4BQ92615 738 aaKnown RBP7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 MTMR8Q96EF0 704 aa7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 SORCS2Q96PQ0 1159 aa7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 UHRF1Q96T88 793 aaPredicted RBP7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 NEU1Q99519 415 aa7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 MENTQ9BUN1 341 aa7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 ADI1Q9BV57 179 aa7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 NRDE2Q9H7Z3 1164 aa7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 SRRDQ9UH36 339 aa7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 EIF2B4Q9UI10 523 aaKnown RBP7.09□□□□□ -1.27
SCARNA1-201ENST00000517138 CYR61O00622 381 aa7.08□□□□□ -1.28
SCARNA1-201ENST00000517138 ZNF185O15231 689 aa7.08□□□□□ -1.28
SCARNA1-201ENST00000517138 MYBL2P10244 700 aa7.08□□□□□ -1.28
SCARNA1-201ENST00000517138 RNASE9P60153 205 aaKnown RBP7.08□□□□□ -1.28
SCARNA1-201ENST00000517138 NHLH2Q02577 135 aa7.08□□□□□ -1.28
SCARNA1-201ENST00000517138 ABHD18Q0P651 414 aa7.08□□□□□ -1.28
SCARNA1-201ENST00000517138 PCBP2Q15366 365 aaKnown RBP eCLIP7.08□□□□□ -1.28
SCARNA1-201ENST00000517138 FAM47AQ5JRC9 791 aa7.08□□□□□ -1.28
SCARNA1-201ENST00000517138 SYDE2Q5VT97 1194 aa7.08□□□□□ -1.28
SCARNA1-201ENST00000517138 AFMIDQ63HM1 303 aa7.08□□□□□ -1.28
SCARNA1-201ENST00000517138 METRNLQ641Q3 311 aa7.08□□□□□ -1.28
SCARNA1-201ENST00000517138 SLC25A43Q8WUT9 341 aaPredicted RBP7.08□□□□□ -1.28
SCARNA1-201ENST00000517138 NRG4Q8WWG1 115 aa7.08□□□□□ -1.28
SCARNA1-201ENST00000517138 NEU4Q8WWR8 484 aaPredicted RBP7.08□□□□□ -1.28
SCARNA1-201ENST00000517138 TFAP2CQ92754 450 aa7.08□□□□□ -1.28
SCARNA1-201ENST00000517138 FAXDC2Q96IV6 333 aa7.08□□□□□ -1.28
SCARNA1-201ENST00000517138 MYOCQ99972 504 aa7.08□□□□□ -1.28
SCARNA1-201ENST00000517138 COL4A3BPQ9Y5P4 624 aa7.08□□□□□ -1.28
SCARNA1-201ENST00000517138 B5MCH6 92 aa7.07□□□□□ -1.28
SCARNA1-201ENST00000517138 C5AR1P21730 350 aa7.07□□□□□ -1.28
SCARNA1-201ENST00000517138 PCSK1P29120 753 aa7.07□□□□□ -1.28
SCARNA1-201ENST00000517138 GUCY1A2P33402 732 aa7.07□□□□□ -1.28
SCARNA1-201ENST00000517138 PER3P56645 1201 aa7.07□□□□□ -1.28
SCARNA1-201ENST00000517138 MGAT2Q10469 447 aa7.07□□□□□ -1.28
SCARNA1-201ENST00000517138 FHL2Q14192 279 aa7.07□□□□□ -1.28
SCARNA1-201ENST00000517138 Q6ZPA2 131 aa7.07□□□□□ -1.28
SCARNA1-201ENST00000517138 PDZD4Q76G19 769 aaPredicted RBP7.07□□□□□ -1.28
SCARNA1-201ENST00000517138 AMOTL1Q8IY63 956 aa7.07□□□□□ -1.28
SCARNA1-201ENST00000517138 ZGPATQ8N5A5 531 aaKnown RBP7.07□□□□□ -1.28
SCARNA1-201ENST00000517138 RAB24Q969Q5 203 aa7.07□□□□□ -1.28
SCARNA1-201ENST00000517138 GPATCH3Q96I76 525 aa7.07□□□□□ -1.28
SCARNA1-201ENST00000517138 MLST8Q9BVC4 326 aa7.07□□□□□ -1.28
SCARNA1-201ENST00000517138 PCDH12Q9NPG4 1184 aa7.07□□□□□ -1.28
SCARNA1-201ENST00000517138 MKS1Q9NXB0 559 aa7.07□□□□□ -1.28
SCARNA1-201ENST00000517138 TRPM5Q9NZQ8 1165 aa7.07□□□□□ -1.28
SCARNA1-201ENST00000517138 AJAP1Q9UKB5 411 aaPredicted RBP7.07□□□□□ -1.28
SCARNA1-201ENST00000517138 CHST2Q9Y4C5 530 aa7.07□□□□□ -1.28
SCARNA1-201ENST00000517138 ACTL7AQ9Y615 435 aa7.07□□□□□ -1.28
SCARNA1-201ENST00000517138 AMY1AP04745 511 aa7.06□□□□□ -1.28
SCARNA1-201ENST00000517138 ALDH1A3P47895 512 aa7.06□□□□□ -1.28
SCARNA1-201ENST00000517138 RAP2BP61225 183 aa7.06□□□□□ -1.28
SCARNA1-201ENST00000517138 EFCAB12Q6NXP0 572 aa7.06□□□□□ -1.28
SCARNA1-201ENST00000517138 USP51Q70EK9 711 aa7.06□□□□□ -1.28
SCARNA1-201ENST00000517138 MRGPREQ86SM8 312 aa7.06□□□□□ -1.28
SCARNA1-201ENST00000517138 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.06□□□□□ -1.28
SCARNA1-201ENST00000517138 CCHCR1Q8TD31 782 aa7.06□□□□□ -1.28
SCARNA1-201ENST00000517138 PHACTR3Q96KR7 559 aa7.06□□□□□ -1.28
SCARNA1-201ENST00000517138 POGKQ9P215 609 aa7.06□□□□□ -1.28
SCARNA1-201ENST00000517138 SLC23A1Q9UHI7 598 aa7.06□□□□□ -1.28
SCARNA1-201ENST00000517138 ZBTB21Q9ULJ3 1066 aa7.06□□□□□ -1.28
SCARNA1-201ENST00000517138 TNKSO95271 1327 aa7.05□□□□□ -1.28
SCARNA1-201ENST00000517138 WASHC2CQ9Y4E1 1318 aa7.05□□□□□ -1.28
SCARNA1-201ENST00000517138 TRIM24O15164 1050 aa7.05□□□□□ -1.28
SCARNA1-201ENST00000517138 LPXNO60711 386 aa7.05□□□□□ -1.28
SCARNA1-201ENST00000517138 NDUFS2O75306 463 aa7.05□□□□□ -1.28
SCARNA1-201ENST00000517138 RAP2AP10114 183 aa7.05□□□□□ -1.28
SCARNA1-201ENST00000517138 ZSCAN20P17040 1043 aaPredicted RBP7.05□□□□□ -1.28
SCARNA1-201ENST00000517138 KRT4P19013 534 aa7.05□□□□□ -1.28
SCARNA1-201ENST00000517138 MCM7P33993 719 aa7.05□□□□□ -1.28
SCARNA1-201ENST00000517138 CHN2P52757 468 aa7.05□□□□□ -1.28
SCARNA1-201ENST00000517138 CLRN1P58418 232 aa7.05□□□□□ -1.28
SCARNA1-201ENST00000517138 ACAP2Q15057 778 aa7.05□□□□□ -1.28
SCARNA1-201ENST00000517138 PDCD4Q53EL6 469 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms