RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 DNAJC3Q13217 504 aa13.66□□□□□ -0.22
SMAD1-215ENST00000515385 WDR72Q3MJ13 1102 aa13.66□□□□□ -0.22
SMAD1-215ENST00000515385 HYIQ5T013 277 aa13.66□□□□□ -0.22
SMAD1-215ENST00000515385 NLRP9Q7RTR0 991 aa13.66□□□□□ -0.22
SMAD1-215ENST00000515385 RELL1Q8IUW5 271 aa13.66□□□□□ -0.22
SMAD1-215ENST00000515385 DENND1AQ8TEH3 1009 aa13.66□□□□□ -0.22
SMAD1-215ENST00000515385 PPP2R3CQ969Q6 453 aa13.66□□□□□ -0.22
SMAD1-215ENST00000515385 SNF8Q96H20 258 aa13.66□□□□□ -0.22
SMAD1-215ENST00000515385 STK33Q9BYT3 514 aa13.66□□□□□ -0.22
SMAD1-215ENST00000515385 CRNKL1Q9BZJ0 848 aaKnown RBP13.66□□□□□ -0.22
SMAD1-215ENST00000515385 OCEL1Q9H607 264 aa13.66□□□□□ -0.22
SMAD1-215ENST00000515385 KANSL2Q9H9L4 492 aa13.66□□□□□ -0.22
SMAD1-215ENST00000515385 CYLDQ9NQC7 956 aa13.66□□□□□ -0.22
SMAD1-215ENST00000515385 ABCF2Q9UG63 623 aa13.66□□□□□ -0.22
SMAD1-215ENST00000515385 ANKRD63C9JTQ0 380 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 ASLP04424 464 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 ABHD2P08910 425 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 TROVE2P10155 538 aaKnown RBP eCLIP13.65□□□□□ -0.22
SMAD1-215ENST00000515385 PIM1P11309 404 aaPredicted RBP13.65□□□□□ -0.22
SMAD1-215ENST00000515385 RPL13P26373 211 aaKnown RBP13.65□□□□□ -0.22
SMAD1-215ENST00000515385 SMARCA1P28370 1054 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 RTP1P59025 263 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 DYNLL1P63167 89 aaKnown RBP13.65□□□□□ -0.22
SMAD1-215ENST00000515385 DSG1Q02413 1049 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 PABPC4Q13310 644 aaKnown RBP eCLIP13.65□□□□□ -0.22
SMAD1-215ENST00000515385 HERC4Q5GLZ8 1057 aaPredicted RBP13.65□□□□□ -0.22
SMAD1-215ENST00000515385 RFWD3Q6PCD5 774 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 CLNKQ7Z7G1 428 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 SLC13A5Q86YT5 568 aaPredicted RBP13.65□□□□□ -0.22
SMAD1-215ENST00000515385 BBOF1Q8ND07 529 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 MCUR1Q96AQ8 359 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 LENG1Q96BZ8 264 aaPredicted RBP13.65□□□□□ -0.22
SMAD1-215ENST00000515385 NSL1Q96IY1 281 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 MAML3Q96JK9 1138 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 MIPEPQ99797 713 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 SYT11Q9BT88 431 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 TMOD4Q9NZQ9 345 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 WDR37Q9Y2I8 494 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 FRMPD4Q14CM0 1322 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 RASA4BC9J798 803 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 hCG_1984214I3L0E3 225 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 GYG2O15488 501 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 RASA4O43374 803 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 CYTH3O43739 400 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 TNFAIP3P21580 790 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 CTTNQ14247 550 aaKnown RBP13.65□□□□□ -0.22
SMAD1-215ENST00000515385 CTC1Q2NKJ3 1217 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 DSTYKQ6XUX3 929 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 PHLDB2Q86SQ0 1253 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 GLYCTKQ8IVS8 523 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 VPS52Q8N1B4 723 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 REXO1Q8N1G1 1221 aaKnown RBP13.65□□□□□ -0.22
SMAD1-215ENST00000515385 ZNF713Q8N859 430 aaPredicted RBP13.65□□□□□ -0.22
SMAD1-215ENST00000515385 OLIG1Q8TAK6 271 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 PIP4K2CQ8TBX8 421 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 NAT14Q8WUY8 206 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 FOXP3Q9BZS1 431 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 KRT82Q9NSB4 513 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 EURLQ9NYK6 297 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 GCNT4Q9P109 453 aa13.65□□□□□ -0.22
SMAD1-215ENST00000515385 FAM196BA6NMK8 535 aa13.64□□□□□ -0.23
SMAD1-215ENST00000515385 PDXKO00764 312 aa13.64□□□□□ -0.23
SMAD1-215ENST00000515385 GAS8O95995 478 aa13.64□□□□□ -0.23
SMAD1-215ENST00000515385 CYP1A1P04798 512 aaPredicted RBP13.64□□□□□ -0.23
SMAD1-215ENST00000515385 UBTFL6P0CB48 400 aaPredicted RBP13.64□□□□□ -0.23
SMAD1-215ENST00000515385 ZNF24P17028 368 aa13.64□□□□□ -0.23
SMAD1-215ENST00000515385 ABCB4P21439 1286 aa13.64□□□□□ -0.23
SMAD1-215ENST00000515385 KYNUQ16719 465 aa13.64□□□□□ -0.23
SMAD1-215ENST00000515385 KLC3Q6P597 504 aa13.64□□□□□ -0.23
SMAD1-215ENST00000515385 KCNK18Q7Z418 384 aa13.64□□□□□ -0.23
SMAD1-215ENST00000515385 RNF168Q8IYW5 571 aaPredicted RBP13.64□□□□□ -0.23
SMAD1-215ENST00000515385 CYP4X1Q8N118 509 aa13.64□□□□□ -0.23
SMAD1-215ENST00000515385 GRK7Q8WTQ7 553 aa13.64□□□□□ -0.23
SMAD1-215ENST00000515385 PTCD3Q96EY7 689 aaKnown RBP13.64□□□□□ -0.23
SMAD1-215ENST00000515385 TTC25Q96NG3 672 aa13.64□□□□□ -0.23
SMAD1-215ENST00000515385 PLVAPQ9BX97 442 aa13.64□□□□□ -0.23
SMAD1-215ENST00000515385 STK32BQ9NY57 414 aa13.64□□□□□ -0.23
SMAD1-215ENST00000515385 NINJ2Q9NZG7 142 aa13.64□□□□□ -0.23
SMAD1-215ENST00000515385 ZNF330Q9Y3S2 320 aaPredicted RBP13.64□□□□□ -0.23
SMAD1-215ENST00000515385 IGSF9BQ9UPX0 1349 aa13.64□□□□□ -0.23
SMAD1-215ENST00000515385 TRPM3Q9HCF6 1732 aaPredicted RBP13.64□□□□□ -0.23
SMAD1-215ENST00000515385 SORBS3O60504 671 aa13.63□□□□□ -0.23
SMAD1-215ENST00000515385 EXOC3O60645 756 aa13.63□□□□□ -0.23
SMAD1-215ENST00000515385 DNAJC6O75061 913 aa13.63□□□□□ -0.23
SMAD1-215ENST00000515385 E2F6O75461 281 aa13.63□□□□□ -0.23
SMAD1-215ENST00000515385 HAUS5O94927 633 aa13.63□□□□□ -0.23
SMAD1-215ENST00000515385 YY1P25490 414 aa13.63□□□□□ -0.23
SMAD1-215ENST00000515385 CRABP2P29373 138 aa13.63□□□□□ -0.23
SMAD1-215ENST00000515385 IGHMBP2P38935 993 aaKnown RBP13.63□□□□□ -0.23
SMAD1-215ENST00000515385 RAP1GDS1P52306 607 aa13.63□□□□□ -0.23
SMAD1-215ENST00000515385 USP46P62068 366 aa13.63□□□□□ -0.23
SMAD1-215ENST00000515385 SULT2A1Q06520 285 aa13.63□□□□□ -0.23
SMAD1-215ENST00000515385 KRT72Q14CN4 511 aa13.63□□□□□ -0.23
SMAD1-215ENST00000515385 NKX1-1Q15270 411 aaPredicted RBP13.63□□□□□ -0.23
SMAD1-215ENST00000515385 KRT28Q7Z3Y7 464 aa13.63□□□□□ -0.23
SMAD1-215ENST00000515385 TDRPQ86YL5 185 aa13.63□□□□□ -0.23
SMAD1-215ENST00000515385 LRRC43Q8N309 656 aa13.63□□□□□ -0.23
SMAD1-215ENST00000515385 MAML1Q92585 1016 aa13.63□□□□□ -0.23
SMAD1-215ENST00000515385 ARHGEF26Q96DR7 871 aa13.63□□□□□ -0.23
SMAD1-215ENST00000515385 DDX27Q96GQ7 796 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms