RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 NPY5RQ15761 445 aa22.61■■□□□ 1.21
SQSTM1-215ENST00000514093 AMHR2Q16671 573 aa22.61■■□□□ 1.21
SQSTM1-215ENST00000514093 BMP2KLQ5H9B9 411 aa22.61■■□□□ 1.21
SQSTM1-215ENST00000514093 LIN9Q5TKA1 542 aa22.61■■□□□ 1.21
SQSTM1-215ENST00000514093 CEP57Q86XR8 500 aa22.61■■□□□ 1.21
SQSTM1-215ENST00000514093 C4orf19Q8IY42 314 aa22.61■■□□□ 1.21
SQSTM1-215ENST00000514093 GPR65Q8IYL9 337 aa22.61■■□□□ 1.21
SQSTM1-215ENST00000514093 DYDC2Q96IM9 177 aa22.61■■□□□ 1.21
SQSTM1-215ENST00000514093 AIFM3Q96NN9 605 aa22.61■■□□□ 1.21
SQSTM1-215ENST00000514093 XPNPEP1Q9NQW7 623 aa22.61■■□□□ 1.21
SQSTM1-215ENST00000514093 PARP2Q9UGN5 583 aa22.61■■□□□ 1.21
SQSTM1-215ENST00000514093 SMG5Q9UPR3 1016 aaKnown RBP22.61■■□□□ 1.21
SQSTM1-215ENST00000514093 PPME1Q9Y570 386 aa22.61■■□□□ 1.21
SQSTM1-215ENST00000514093 SNX14Q9Y5W7 946 aa22.61■■□□□ 1.21
SQSTM1-215ENST00000514093 KMT2BQ9UMN6 2715 aaPredicted RBP22.6■■□□□ 1.21
SQSTM1-215ENST00000514093 ADAM12O43184 909 aa22.6■■□□□ 1.21
SQSTM1-215ENST00000514093 B4GALT5O43286 388 aa22.6■■□□□ 1.21
SQSTM1-215ENST00000514093 NPTXRO95502 500 aa22.6■■□□□ 1.21
SQSTM1-215ENST00000514093 RPS6KB1P23443 525 aa22.6■■□□□ 1.21
SQSTM1-215ENST00000514093 CREMQ03060 361 aa22.6■■□□□ 1.21
SQSTM1-215ENST00000514093 MBTD1Q05BQ5 628 aa22.6■■□□□ 1.21
SQSTM1-215ENST00000514093 SSRP1Q08945 709 aaKnown RBP22.6■■□□□ 1.21
SQSTM1-215ENST00000514093 MTSS1LQ765P7 747 aa22.6■■□□□ 1.21
SQSTM1-215ENST00000514093 OTUD6AQ7L8S5 288 aa22.6■■□□□ 1.21
SQSTM1-215ENST00000514093 ZBTB44Q8NCP5 570 aa22.6■■□□□ 1.21
SQSTM1-215ENST00000514093 ASAP3Q8TDY4 903 aa22.6■■□□□ 1.21
SQSTM1-215ENST00000514093 KCNB2Q92953 911 aa22.6■■□□□ 1.21
SQSTM1-215ENST00000514093 KCNMB3Q9NPA1 279 aa22.6■■□□□ 1.21
SQSTM1-215ENST00000514093 HCFC1R1Q9NWW0 138 aa22.6■■□□□ 1.21
SQSTM1-215ENST00000514093 ZSCAN32Q9NX65 697 aa22.6■■□□□ 1.21
SQSTM1-215ENST00000514093 PATJQ8NI35 1801 aa22.59■■□□□ 1.21
SQSTM1-215ENST00000514093 HNRNPA1P09651 372 aaKnown RBP eCLIP22.59■■□□□ 1.21
SQSTM1-215ENST00000514093 TARSP26639 723 aaKnown RBP22.59■■□□□ 1.21
SQSTM1-215ENST00000514093 CYP4A11Q02928 519 aa22.59■■□□□ 1.21
SQSTM1-215ENST00000514093 GRIK3Q13003 919 aa22.59■■□□□ 1.21
SQSTM1-215ENST00000514093 HSP90AA2PQ14568 343 aaPredicted RBP22.59■■□□□ 1.21
SQSTM1-215ENST00000514093 EPHA7Q15375 998 aa22.59■■□□□ 1.21
SQSTM1-215ENST00000514093 FAM171A1Q5VUB5 890 aa22.59■■□□□ 1.21
SQSTM1-215ENST00000514093 NCAPH2Q6IBW4 605 aa22.59■■□□□ 1.21
SQSTM1-215ENST00000514093 TRIM22Q8IYM9 498 aa22.59■■□□□ 1.21
SQSTM1-215ENST00000514093 HACE1Q8IYU2 909 aa22.59■■□□□ 1.21
SQSTM1-215ENST00000514093 LNX1Q8TBB1 728 aaPredicted RBP22.59■■□□□ 1.21
SQSTM1-215ENST00000514093 FAM20AQ96MK3 541 aa22.59■■□□□ 1.21
SQSTM1-215ENST00000514093 PHF20Q9BVI0 1012 aa22.59■■□□□ 1.21
SQSTM1-215ENST00000514093 AGXT2Q9BYV1 514 aa22.59■■□□□ 1.21
SQSTM1-215ENST00000514093 OSBPL6Q9BZF3 934 aa22.59■■□□□ 1.21
SQSTM1-215ENST00000514093 CDV3Q9UKY7 258 aaKnown RBP22.59■■□□□ 1.21
SQSTM1-215ENST00000514093 USP18Q9UMW8 372 aa22.59■■□□□ 1.21
SQSTM1-215ENST00000514093 SF3B1O75533 1304 aaKnown RBP eCLIP22.58■■□□□ 1.217e-6■■■■■ 72.3
SQSTM1-215ENST00000514093 CASTOR2A6NHX0 329 aa22.58■■□□□ 1.21
SQSTM1-215ENST00000514093 SDHBP21912 280 aa22.58■■□□□ 1.21
SQSTM1-215ENST00000514093 PFKPQ01813 784 aa22.58■■□□□ 1.21
SQSTM1-215ENST00000514093 CAPSQ13938 189 aa22.58■■□□□ 1.21
SQSTM1-215ENST00000514093 TFDP1Q14186 410 aa22.58■■□□□ 1.21
SQSTM1-215ENST00000514093 MXD4Q14582 209 aaPredicted RBP22.58■■□□□ 1.21
SQSTM1-215ENST00000514093 PCBP1Q15365 356 aaKnown RBP eCLIP22.58■■□□□ 1.216e-7■■□□□ 13.3
SQSTM1-215ENST00000514093 PSMD5Q16401 504 aa22.58■■□□□ 1.21
SQSTM1-215ENST00000514093 ZBTB41Q5SVQ8 909 aa22.58■■□□□ 1.21
SQSTM1-215ENST00000514093 TPRG1Q6ZUI0 275 aa22.58■■□□□ 1.21
SQSTM1-215ENST00000514093 FBXL16Q8N461 479 aa22.58■■□□□ 1.21
SQSTM1-215ENST00000514093 GPR161Q8N6U8 529 aaKnown RBP22.58■■□□□ 1.21
SQSTM1-215ENST00000514093 DAGLBQ8NCG7 672 aa22.58■■□□□ 1.21
SQSTM1-215ENST00000514093 ING5Q8WYH8 240 aa22.58■■□□□ 1.21
SQSTM1-215ENST00000514093 HAS1Q92839 578 aa22.58■■□□□ 1.21
SQSTM1-215ENST00000514093 SECISBP2LQ93073 1101 aaKnown RBP22.58■■□□□ 1.21
SQSTM1-215ENST00000514093 TTPALQ9BTX7 342 aa22.58■■□□□ 1.21
SQSTM1-215ENST00000514093 KCNJ14Q9UNX9 436 aa22.58■■□□□ 1.21
SQSTM1-215ENST00000514093 KRT25Q7Z3Z0 450 aa22.57■■□□□ 1.2
SQSTM1-215ENST00000514093 TPH2Q8IWU9 490 aa22.57■■□□□ 1.2
SQSTM1-215ENST00000514093 SLC7A14Q8TBB6 771 aa22.57■■□□□ 1.2
SQSTM1-215ENST00000514093 BORCS6Q96GS4 357 aa22.57■■□□□ 1.2
SQSTM1-215ENST00000514093 LARP6Q9BRS8 491 aaKnown RBP22.57■■□□□ 1.2
SQSTM1-215ENST00000514093 EPC1Q9H2F5 836 aa22.57■■□□□ 1.2
SQSTM1-215ENST00000514093 ZSWIM4Q9H7M6 989 aa22.57■■□□□ 1.2
SQSTM1-215ENST00000514093 PRR5-ARHGAP8B1AHC4 643 aa22.56■■□□□ 1.2
SQSTM1-215ENST00000514093 MARCH6O60337 910 aa22.56■■□□□ 1.2
SQSTM1-215ENST00000514093 LILRB5O75023 590 aa22.56■■□□□ 1.2
SQSTM1-215ENST00000514093 XYLBO75191 536 aa22.56■■□□□ 1.2
SQSTM1-215ENST00000514093 KIF4AO95239 1232 aa22.56■■□□□ 1.2
SQSTM1-215ENST00000514093 DEXIO95424 95 aa22.56■■□□□ 1.2
SQSTM1-215ENST00000514093 TGM1P22735 817 aa22.56■■□□□ 1.2
SQSTM1-215ENST00000514093 ARHGAP8P85298 464 aa22.56■■□□□ 1.2
SQSTM1-215ENST00000514093 LMNB2Q03252 620 aa22.56■■□□□ 1.2
SQSTM1-215ENST00000514093 AXDND1Q5T1B0 1012 aaPredicted RBP22.56■■□□□ 1.2
SQSTM1-215ENST00000514093 SLC27A1Q6PCB7 646 aa22.56■■□□□ 1.2
SQSTM1-215ENST00000514093 IFNLR1Q8IU57 520 aaPredicted RBP22.56■■□□□ 1.2
SQSTM1-215ENST00000514093 NPAS3Q8IXF0 933 aa22.56■■□□□ 1.2
SQSTM1-215ENST00000514093 PIK3R5Q8WYR1 880 aa22.56■■□□□ 1.2
SQSTM1-215ENST00000514093 PLA2G2FQ9BZM2 168 aa22.56■■□□□ 1.2
SQSTM1-215ENST00000514093 CXCL16Q9H2A7 254 aa22.56■■□□□ 1.2
SQSTM1-215ENST00000514093 PARD6AQ9NPB6 346 aa22.56■■□□□ 1.2
SQSTM1-215ENST00000514093 DNMT3BQ9UBC3 853 aaKnown RBP22.56■■□□□ 1.2
SQSTM1-215ENST00000514093 ACACBO00763 2458 aa22.56■■□□□ 1.2
SQSTM1-215ENST00000514093 CCNT1O60563 726 aaKnown RBP22.55■■□□□ 1.2
SQSTM1-215ENST00000514093 CDC45O75419 566 aa22.55■■□□□ 1.2
SQSTM1-215ENST00000514093 HSPA4P34932 840 aa22.55■■□□□ 1.2
SQSTM1-215ENST00000514093 MAGEA9P43362 315 aa22.55■■□□□ 1.2
SQSTM1-215ENST00000514093 TUSC3Q13454 348 aa22.55■■□□□ 1.2
SQSTM1-215ENST00000514093 RSPO2Q6UXX9 243 aaPredicted RBP22.55■■□□□ 1.2
SQSTM1-215ENST00000514093 NELL1Q92832 810 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms