RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 ELANEP08246 267 aa3.28□□□□□ -1.88
PDGFC-208ENST00000512711 ENPP1P22413 925 aa3.28□□□□□ -1.88
PDGFC-208ENST00000512711 PLA2G5P39877 138 aa3.28□□□□□ -1.88
PDGFC-208ENST00000512711 PTH2RP49190 550 aa3.28□□□□□ -1.88
PDGFC-208ENST00000512711 CLK3P49761 638 aaKnown RBP3.28□□□□□ -1.88
PDGFC-208ENST00000512711 CHN2P52757 468 aa3.28□□□□□ -1.88
PDGFC-208ENST00000512711 FOXI1Q12951 378 aa3.28□□□□□ -1.88
PDGFC-208ENST00000512711 BEAN1Q3B7T3 259 aa3.28□□□□□ -1.88
PDGFC-208ENST00000512711 GIMAP6Q6P9H5 292 aa3.28□□□□□ -1.88
PDGFC-208ENST00000512711 OLFML1Q6UWY5 402 aa3.28□□□□□ -1.88
PDGFC-208ENST00000512711 Q6YL49 198 aa3.28□□□□□ -1.88
PDGFC-208ENST00000512711 CMTR2Q8IYT2 770 aaKnown RBP3.28□□□□□ -1.88
PDGFC-208ENST00000512711 CPEB3Q8NE35 698 aaKnown RBP3.28□□□□□ -1.88
PDGFC-208ENST00000512711 TFAP2CQ92754 450 aa3.28□□□□□ -1.88
PDGFC-208ENST00000512711 CRAMP1Q96RY5 1269 aa3.28□□□□□ -1.88
PDGFC-208ENST00000512711 DCLRE1CQ96SD1 692 aaKnown RBP3.28□□□□□ -1.88
PDGFC-208ENST00000512711 IFT22Q9H7X7 185 aa3.28□□□□□ -1.88
PDGFC-208ENST00000512711 DMRT3Q9NQL9 472 aa3.28□□□□□ -1.88
PDGFC-208ENST00000512711 SYBUQ9NX95 663 aa3.28□□□□□ -1.88
PDGFC-208ENST00000512711 USP15Q9Y4E8 981 aaPredicted RBP3.28□□□□□ -1.88
PDGFC-208ENST00000512711 COL11A2P13942 1736 aaPredicted RBP3.27□□□□□ -1.89
PDGFC-208ENST00000512711 TLDC2A0PJX2 215 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 CXorf49A8MYA2 514 aaPredicted RBP3.27□□□□□ -1.89
PDGFC-208ENST00000512711 RNASET2O00584 256 aaKnown RBP3.27□□□□□ -1.89
PDGFC-208ENST00000512711 KIAA0355O15063 1070 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 B3GALT2O43825 422 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 AKR1B10O60218 316 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 ZEB2O60315 1214 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 NUDT3O95989 172 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 GASTP01350 101 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 LMNAP02545 664 aaKnown RBP3.27□□□□□ -1.89
PDGFC-208ENST00000512711 PTPN7P35236 360 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 MASP1P48740 699 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 PPP3CAQ08209 521 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 RESTQ13127 1097 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 TP53BP2Q13625 1128 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.27□□□□□ -1.89
PDGFC-208ENST00000512711 FAM47AQ5JRC9 791 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 HECTD2Q5U5R9 776 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 IQSEC1Q6DN90 963 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 KCNK18Q7Z418 384 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 NPM2Q86SE8 214 aaKnown RBP3.27□□□□□ -1.89
PDGFC-208ENST00000512711 ARHGEF19Q8IW93 802 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 GPR156Q8NFN8 814 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 TTC1Q99614 292 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 MYOCQ99972 504 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 FAM126AQ9BYI3 521 aaPredicted RBP3.27□□□□□ -1.89
PDGFC-208ENST00000512711 QRSL1Q9H0R6 528 aaKnown RBP3.27□□□□□ -1.89
PDGFC-208ENST00000512711 PRDM13Q9H4Q3 707 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 LDAHQ9H6V9 325 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 ALG13Q9NP73 1137 aaKnown RBP3.27□□□□□ -1.89
PDGFC-208ENST00000512711 SCOCQ9UIL1 159 aa3.27□□□□□ -1.89
PDGFC-208ENST00000512711 B5MCH6 92 aa3.26□□□□□ -1.89
PDGFC-208ENST00000512711 SPDEFO95238 335 aa3.26□□□□□ -1.89
PDGFC-208ENST00000512711 EYA4O95677 639 aa3.26□□□□□ -1.89
PDGFC-208ENST00000512711 RBP3P10745 1247 aa3.26□□□□□ -1.89
PDGFC-208ENST00000512711 GSPT1P15170 499 aaKnown RBP3.26□□□□□ -1.89
PDGFC-208ENST00000512711 ALOX15P16050 662 aaPredicted RBP3.26□□□□□ -1.89
PDGFC-208ENST00000512711 FPR1P21462 350 aa3.26□□□□□ -1.89
PDGFC-208ENST00000512711 SREBF1P36956 1147 aa3.26□□□□□ -1.89
PDGFC-208ENST00000512711 GPR3P46089 330 aa3.26□□□□□ -1.89
PDGFC-208ENST00000512711 SESN3P58005 492 aa3.26□□□□□ -1.89
PDGFC-208ENST00000512711 MEF2AQ02078 507 aaPredicted RBP3.26□□□□□ -1.89
PDGFC-208ENST00000512711 ADRM1Q16186 407 aa3.26□□□□□ -1.89
PDGFC-208ENST00000512711 TOR2AQ5JU69 321 aa3.26□□□□□ -1.89
PDGFC-208ENST00000512711 TSHZ3Q63HK5 1081 aa3.26□□□□□ -1.89
PDGFC-208ENST00000512711 DPY19L2P1Q6NXN4 242 aa3.26□□□□□ -1.89
PDGFC-208ENST00000512711 MED25Q71SY5 747 aa3.26□□□□□ -1.89
PDGFC-208ENST00000512711 NOP9Q86U38 636 aaKnown RBP3.26□□□□□ -1.89
PDGFC-208ENST00000512711 TRMT2AQ8IZ69 625 aaKnown RBP3.26□□□□□ -1.89
PDGFC-208ENST00000512711 ASB10Q8WXI3 467 aa3.26□□□□□ -1.89
PDGFC-208ENST00000512711 SLC2A13Q96QE2 648 aa3.26□□□□□ -1.89
PDGFC-208ENST00000512711 TOR3AQ9H497 397 aa3.26□□□□□ -1.89
PDGFC-208ENST00000512711 RIOX1Q9H6W3 641 aa3.26□□□□□ -1.89
PDGFC-208ENST00000512711 CYP4F11Q9HBI6 524 aa3.26□□□□□ -1.89
PDGFC-208ENST00000512711 SIK3Q9Y2K2 1263 aa3.26□□□□□ -1.89
PDGFC-208ENST00000512711 GAGE12BA1L429 117 aa3.25□□□□□ -1.89
PDGFC-208ENST00000512711 PIPSLA2A3N6 862 aa3.25□□□□□ -1.89
PDGFC-208ENST00000512711 GAGE12HA6NDE8 117 aa3.25□□□□□ -1.89
PDGFC-208ENST00000512711 MARCH11A6NNE9 402 aa3.25□□□□□ -1.89
PDGFC-208ENST00000512711 SLC6A2P23975 617 aa3.25□□□□□ -1.89
PDGFC-208ENST00000512711 CRHR1P34998 444 aa3.25□□□□□ -1.89
PDGFC-208ENST00000512711 BMPR1AP36894 532 aa3.25□□□□□ -1.89
PDGFC-208ENST00000512711 SLC6A9P48067 706 aa3.25□□□□□ -1.89
PDGFC-208ENST00000512711 CLRN1P58418 232 aa3.25□□□□□ -1.89
PDGFC-208ENST00000512711 SRSF2Q01130 221 aaKnown RBP3.25□□□□□ -1.89
PDGFC-208ENST00000512711 SCAPQ12770 1279 aa3.25□□□□□ -1.89
PDGFC-208ENST00000512711 STAT4Q14765 748 aa3.25□□□□□ -1.89
PDGFC-208ENST00000512711 SEPT2Q15019 361 aa3.25□□□□□ -1.89
PDGFC-208ENST00000512711 MUM1Q2TAK8 710 aa3.25□□□□□ -1.89
PDGFC-208ENST00000512711 MST1LQ2TV78 715 aa3.25□□□□□ -1.89
PDGFC-208ENST00000512711 ATXN7L2Q5T6C5 722 aaPredicted RBP3.25□□□□□ -1.89
PDGFC-208ENST00000512711 AGAP9Q5VTM2 703 aa3.25□□□□□ -1.89
PDGFC-208ENST00000512711 AFMIDQ63HM1 303 aa3.25□□□□□ -1.89
PDGFC-208ENST00000512711 B3GNTL1Q67FW5 361 aaPredicted RBP3.25□□□□□ -1.89
PDGFC-208ENST00000512711 ZNF572Q7Z3I7 529 aaPredicted RBP3.25□□□□□ -1.89
PDGFC-208ENST00000512711 LCORLQ8N3X6 602 aa3.25□□□□□ -1.89
PDGFC-208ENST00000512711 AFAP1L2Q8N4X5 818 aa3.25□□□□□ -1.89
PDGFC-208ENST00000512711 OR7D4Q8NG98 312 aa3.25□□□□□ -1.89
PDGFC-208ENST00000512711 OR2I1PQ8NGU4 316 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms