RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 GBP3Q9H0R5 595 aa17.06■□□□□ 0.32
SH3TC1-220ENST00000511002 NXF3Q9H4D5 531 aaKnown RBP17.06■□□□□ 0.32
SH3TC1-220ENST00000511002 RSAD1Q9HA92 442 aa17.06■□□□□ 0.32
SH3TC1-220ENST00000511002 TLR9Q9NR96 1032 aa17.06■□□□□ 0.32
SH3TC1-220ENST00000511002 PRMT7Q9NVM4 692 aaPredicted RBP17.06■□□□□ 0.32
SH3TC1-220ENST00000511002 CNTNAP2Q9UHC6 1331 aa17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 K7ERI5 159 aa17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 FSCN2O14926 492 aa17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 PER2O15055 1255 aa17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 ZC3H11AO75152 810 aaKnown RBP eCLIP17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 DDHD2O94830 711 aa17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 NPTXRO95502 500 aa17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 MYL1P05976 194 aa17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 MYBP10242 640 aa17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 AXLP30530 894 aa17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 MCM4P33991 863 aa17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 PLCB3Q01970 1234 aa17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 EHHADHQ08426 723 aa17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 FAM187BQ17R55 369 aa17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 CTC1Q2NKJ3 1217 aa17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 ZC2HC1CQ53FD0 456 aaPredicted RBP17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 GLIS3Q8NEA6 775 aa17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 GPT2Q8TD30 523 aa17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 UHRF1Q96T88 793 aaPredicted RBP17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 MRPL9Q9BYD2 267 aaKnown RBP17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 TMEM134Q9H6X4 195 aa17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 MRPL44Q9H9J2 332 aaKnown RBP17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 OLFML3Q9NRN5 406 aa17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 MIOSQ9NXC5 875 aa17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 SPG21Q9NZD8 308 aa17.05■□□□□ 0.32
SH3TC1-220ENST00000511002 PVALEFA0A1B0GWK0 134 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 GLP2RO95838 553 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 RPN1P04843 607 aaKnown RBP17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 IL9P15248 144 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 NRIP1P48552 1158 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 SLC11A1P49279 550 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 UBE3AQ05086 875 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 PRPF4BQ13523 1007 aaKnown RBP17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 PCBP1Q15365 356 aaKnown RBP eCLIP17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 CLUL1Q15846 466 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 AAK1Q2M2I8 961 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 LEXMQ3ZCV2 418 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 KMT5BQ4FZB7 885 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 FAM26FQ5R3K3 315 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 NT5DC1Q5TFE4 455 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 PLPP4Q5VZY2 271 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 EEF1DP3Q658K8 133 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 MICAL1Q8TDZ2 1067 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 PGBD4Q96DM1 585 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 CCDC34Q96HJ3 373 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 PRIMPOLQ96LW4 560 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 ZFP42Q96MM3 310 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 GAD1Q99259 594 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 KCNG1Q9UIX4 513 aa17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 TDRD15B5MCY1 1934 aaKnown RBP17.04■□□□□ 0.32
SH3TC1-220ENST00000511002 A0A1B0GUA9 196 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 HIDE1A8MVS5 230 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 H0YCG3 227 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 ACKR2O00590 384 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 PPP1R37O75864 691 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 GCNT3O95395 438 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 POMCP01189 267 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 GALTP07902 379 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 ITGA4P13612 1032 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 MLH1P40692 756 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 GTF2BQ00403 316 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 ADAM15Q13444 863 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 ZNF720Q7Z2F6 126 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 VN1R2Q8NFZ6 395 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 KCNN1Q92952 543 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 CCDC51Q96ER9 411 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 TCF25Q9BQ70 676 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 STRA6Q9BX79 667 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 VN1R3Q9BXE9 311 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 CXCL16Q9H2A7 254 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 IKZF4Q9H2S9 585 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 ST6GALNAC4Q9H4F1 302 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 PDZD7Q9H5P4 517 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 EXOC1Q9NV70 894 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 TBX20Q9UMR3 447 aa17.03■□□□□ 0.32
SH3TC1-220ENST00000511002 AKAP5P24588 427 aa17.02■□□□□ 0.32
SH3TC1-220ENST00000511002 PPM1AP35813 382 aa17.02■□□□□ 0.32
SH3TC1-220ENST00000511002 SCNN1GP51170 649 aa17.02■□□□□ 0.32
SH3TC1-220ENST00000511002 RNASELQ05823 741 aaKnown RBP17.02■□□□□ 0.32
SH3TC1-220ENST00000511002 KCNA1Q09470 495 aa17.02■□□□□ 0.32
SH3TC1-220ENST00000511002 STRN3Q13033 797 aa17.02■□□□□ 0.32
SH3TC1-220ENST00000511002 CAMK4Q16566 473 aa17.02■□□□□ 0.32
SH3TC1-220ENST00000511002 TMEM132AQ24JP5 1023 aa17.02■□□□□ 0.32
SH3TC1-220ENST00000511002 AUTS2Q8WXX7 1259 aa17.02■□□□□ 0.32
SH3TC1-220ENST00000511002 TARS2Q9BW92 718 aaKnown RBP17.02■□□□□ 0.32
SH3TC1-220ENST00000511002 MRPL4Q9BYD3 311 aaKnown RBP17.02■□□□□ 0.32
SH3TC1-220ENST00000511002 CLSTN2Q9H4D0 955 aa17.02■□□□□ 0.32
SH3TC1-220ENST00000511002 SLC39A2Q9NP94 309 aa17.02■□□□□ 0.32
SH3TC1-220ENST00000511002 CD320Q9NPF0 282 aa17.02■□□□□ 0.32
SH3TC1-220ENST00000511002 KLK14Q9P0G3 267 aa17.02■□□□□ 0.32
SH3TC1-220ENST00000511002 LZTS1Q9Y250 596 aa17.02■□□□□ 0.32
SH3TC1-220ENST00000511002 MUC3AQ02505 3323 aa17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 ARL5CA6NH57 179 aa17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 F8W810 466 aa17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 PRPF6O94906 941 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms