RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 ASB2Q96Q27 587 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 COL25A1Q9BXS0 654 aaPredicted RBP12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 TRIM9Q9C026 710 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 GBP3Q9H0R5 595 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 NGRNQ9NPE2 291 aaKnown RBP12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 OLFML3Q9NRN5 406 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 MARCH5Q9NX47 278 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 THEGQ9P2T0 379 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 KCNH3Q9ULD8 1083 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 FAN1Q9Y2M0 1017 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 RALGAPA2Q2PPJ7 1873 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 XIRP2A4UGR9 3374 aa12.88□□□□□ -0.35
HMGXB3-203ENST00000510472 COL4A4P53420 1690 aaPredicted RBP12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 K7ENM7 598 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 POLR2DO15514 142 aaKnown RBP12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 FAM189A1O60320 539 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 LILRB3O75022 631 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 BMP1P13497 986 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 GAP43P17677 238 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 ABCD1P33897 745 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 GTF2F1P35269 517 aaKnown RBP eCLIP12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 MRPS5P82675 430 aaKnown RBP12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 TFF2Q03403 129 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 KCNC3Q14003 757 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 SKIV2LQ15477 1246 aaKnown RBP12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 TMEM132AQ24JP5 1023 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 ZNF568Q3ZCX4 644 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 ZC2HC1CQ53FD0 456 aaPredicted RBP12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 ZBTB33Q86T24 672 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 STAMQ92783 540 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 TMEM169Q96HH4 297 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 SPATA32Q96LK8 384 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 FAM193BQ96PV7 902 aaPredicted RBP12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 PPP1R10Q96QC0 940 aaKnown RBP12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 C7orf25Q9BPX7 421 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 SCAND2PQ9GZW5 306 aaPredicted RBP12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 ZHX3Q9H4I2 956 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 UBE2ZQ9H832 354 aaPredicted RBP12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 MAGEF1Q9HAY2 307 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 FAM13BQ9NYF5 915 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 GDAQ9Y2T3 454 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 IRAK3Q9Y616 596 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 STYXL1Q9Y6J8 313 aa12.87□□□□□ -0.35
HMGXB3-203ENST00000510472 A0A0B4J269 797 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 SMIM28A0A1B0GU29 152 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 A0A1W2PQ27 194 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 A0A1W2PQ64 194 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 A0A1W2PQD8 194 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 C2orf71A6NGG8 1288 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 HIDE1A8MVS5 230 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 F8W810 466 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 CLDN3O15551 220 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 THP07101 528 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 ADRB2P07550 413 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 CTSAP10619 480 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 KCNE1P15382 129 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 EHHADHQ08426 723 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 TUSC3Q13454 348 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 NOLC1Q14978 699 aaKnown RBP eCLIP12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 DUSP6Q16828 381 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 SLC10A6Q3KNW5 377 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 VPS52Q8N1B4 723 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 EFHBQ8N7U6 833 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 MICAL1Q8TDZ2 1067 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 HVCN1Q96D96 273 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 ZMAT2Q96NC0 199 aaKnown RBP12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 TCF25Q9BQ70 676 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 TCHPQ9BT92 498 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 FGFBP2Q9BYJ0 223 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 LRRC27Q9C0I9 530 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 ZBP1Q9H171 429 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 PANK4Q9NVE7 773 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 STK39Q9UEW8 545 aa12.86□□□□□ -0.35
HMGXB3-203ENST00000510472 ANKRD63C9JTQ0 380 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 ACTN4O43707 911 aaKnown RBP12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 SLFN14P0C7P3 912 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 ADSSP30520 456 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 OR1G1P47890 313 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 NRIP1P48552 1158 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 CASP5P51878 434 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 AMPD3Q01432 767 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 DLX2Q07687 328 aaPredicted RBP12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 KCNA1Q09470 495 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 LEXMQ3ZCV2 418 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 HERC4Q5GLZ8 1057 aaPredicted RBP12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 CD300LGQ6UXG3 332 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 TMEM184AQ6ZMB5 413 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 TAS1R1Q7RTX1 841 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 TMC7Q7Z402 723 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 SNX27Q96L92 541 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 ACAP3Q96P50 834 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 RPS6KC1Q96S38 1066 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 CDCA3Q99618 268 aaPredicted RBP12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 PAAF1Q9BRP4 392 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 PYM1Q9BRP8 204 aaKnown RBP12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 CCDC94Q9BW85 323 aaPredicted RBP12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 COLEC11Q9BWP8 271 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 IKZF4Q9H2S9 585 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 TLE6Q9H808 572 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms