RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 PIDD1Q9HB75 910 aa16.98■□□□□ 0.31
TPM3-219ENST00000509409 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.98■□□□□ 0.31
TPM3-219ENST00000509409 CHST7Q9NS84 486 aa16.98■□□□□ 0.31
TPM3-219ENST00000509409 CASTOR2A6NHX0 329 aa16.97■□□□□ 0.31
TPM3-219ENST00000509409 TTLL13PA6NNM8 815 aa16.97■□□□□ 0.31
TPM3-219ENST00000509409 EFEMP2O95967 443 aa16.97■□□□□ 0.31
TPM3-219ENST00000509409 PTGDRQ13258 359 aa16.97■□□□□ 0.31
TPM3-219ENST00000509409 TUSC3Q13454 348 aa16.97■□□□□ 0.31
TPM3-219ENST00000509409 PDIA5Q14554 519 aa16.97■□□□□ 0.31
TPM3-219ENST00000509409 CEP57Q86XR8 500 aa16.97■□□□□ 0.31
TPM3-219ENST00000509409 RNF168Q8IYW5 571 aaPredicted RBP16.97■□□□□ 0.31
TPM3-219ENST00000509409 CMASQ8NFW8 434 aaPredicted RBP16.97■□□□□ 0.31
TPM3-219ENST00000509409 SNX29Q8TEQ0 813 aa16.97■□□□□ 0.31
TPM3-219ENST00000509409 HASPINQ8TF76 798 aa16.97■□□□□ 0.31
TPM3-219ENST00000509409 KIFAP3Q92845 792 aa16.97■□□□□ 0.31
TPM3-219ENST00000509409 MFSD1Q9H3U5 465 aa16.97■□□□□ 0.31
TPM3-219ENST00000509409 DDX19AQ9NUU7 478 aaKnown RBP16.97■□□□□ 0.31
TPM3-219ENST00000509409 CACNG4Q9UBN1 327 aa16.97■□□□□ 0.31
TPM3-219ENST00000509409 DNM3Q9UQ16 869 aa16.97■□□□□ 0.31
TPM3-219ENST00000509409 GDAQ9Y2T3 454 aa16.97■□□□□ 0.31
TPM3-219ENST00000509409 RFPL2O75678 378 aa16.96■□□□□ 0.31
TPM3-219ENST00000509409 RECQL4O94761 1208 aa16.96■□□□□ 0.31
TPM3-219ENST00000509409 RPL17P18621 184 aaKnown RBP16.96■□□□□ 0.31
TPM3-219ENST00000509409 GBP2P32456 591 aaPredicted RBP16.96■□□□□ 0.31
TPM3-219ENST00000509409 EFNA5P52803 228 aa16.96■□□□□ 0.31
TPM3-219ENST00000509409 CREMQ03060 361 aa16.96■□□□□ 0.31
TPM3-219ENST00000509409 KRT79Q5XKE5 535 aa16.96■□□□□ 0.31
TPM3-219ENST00000509409 MCTP1Q6DN14 999 aa16.96■□□□□ 0.31
TPM3-219ENST00000509409 CYP26C1Q6V0L0 522 aa16.96■□□□□ 0.31
TPM3-219ENST00000509409 HDAC7Q8WUI4 952 aa16.96■□□□□ 0.31
TPM3-219ENST00000509409 SMG7Q92540 1137 aaKnown RBP16.96■□□□□ 0.31
TPM3-219ENST00000509409 STAMQ92783 540 aa16.96■□□□□ 0.31
TPM3-219ENST00000509409 KIF2CQ99661 725 aa16.96■□□□□ 0.31
TPM3-219ENST00000509409 PAAF1Q9BRP4 392 aa16.96■□□□□ 0.31
TPM3-219ENST00000509409 KIFC3Q9BVG8 833 aa16.96■□□□□ 0.31
TPM3-219ENST00000509409 PLEKHA4Q9H4M7 779 aa16.96■□□□□ 0.31
TPM3-219ENST00000509409 FNIP2Q9P278 1114 aa16.96■□□□□ 0.31
TPM3-219ENST00000509409 KIF3AQ9Y496 699 aa16.96■□□□□ 0.31
TPM3-219ENST00000509409 PCDHB6Q9Y5E3 794 aa16.96■□□□□ 0.31
TPM3-219ENST00000509409 SF3B1O75533 1304 aaKnown RBP eCLIP16.96■□□□□ 0.37e-7■■■■■ 108.6
TPM3-219ENST00000509409 ZMYM2Q9UBW7 1377 aa16.95■□□□□ 0.3
TPM3-219ENST00000509409 WDFY4Q6ZS81 3184 aa16.95■□□□□ 0.3
TPM3-219ENST00000509409 CCDC169A6NNP5 214 aa16.95■□□□□ 0.3
TPM3-219ENST00000509409 K7ERI5 159 aa16.95■□□□□ 0.3
TPM3-219ENST00000509409 TGM5O43548 720 aa16.95■□□□□ 0.3
TPM3-219ENST00000509409 U2AF2P26368 475 aaKnown RBP eCLIP16.95■□□□□ 0.35e-7■■■■□ 22.9
TPM3-219ENST00000509409 TCF15Q12870 199 aa16.95■□□□□ 0.3
TPM3-219ENST00000509409 TDGQ13569 410 aa16.95■□□□□ 0.3
TPM3-219ENST00000509409 DCAF4L1Q3SXM0 396 aa16.95■□□□□ 0.3
TPM3-219ENST00000509409 FAM171A1Q5VUB5 890 aa16.95■□□□□ 0.3
TPM3-219ENST00000509409 EEF1DP3Q658K8 133 aa16.95■□□□□ 0.3
TPM3-219ENST00000509409 DTHD1Q6ZMT9 781 aa16.95■□□□□ 0.3
TPM3-219ENST00000509409 APBB1IPQ7Z5R6 666 aaPredicted RBP16.95■□□□□ 0.3
TPM3-219ENST00000509409 GPR65Q8IYL9 337 aa16.95■□□□□ 0.3
TPM3-219ENST00000509409 TTPALQ9BTX7 342 aa16.95■□□□□ 0.3
TPM3-219ENST00000509409 CCDC113Q9H0I3 377 aa16.95■□□□□ 0.3
TPM3-219ENST00000509409 WDR6Q9NNW5 1121 aaKnown RBP16.95■□□□□ 0.3
TPM3-219ENST00000509409 ARID2Q68CP9 1835 aa16.94■□□□□ 0.3
TPM3-219ENST00000509409 PTGESO14684 152 aa16.94■□□□□ 0.3
TPM3-219ENST00000509409 TOB1P50616 345 aaPredicted RBP16.94■□□□□ 0.3
TPM3-219ENST00000509409 ZRSR1Q15695 479 aaKnown RBP16.94■□□□□ 0.3
TPM3-219ENST00000509409 C8orf34Q49A92 452 aa16.94■□□□□ 0.3
TPM3-219ENST00000509409 NT5DC1Q5TFE4 455 aa16.94■□□□□ 0.3
TPM3-219ENST00000509409 ATF7IP2Q5U623 682 aa16.94■□□□□ 0.3
TPM3-219ENST00000509409 PRSS55Q6UWB4 352 aaPredicted RBP16.94■□□□□ 0.3
TPM3-219ENST00000509409 ATOH1Q92858 354 aaPredicted RBP16.94■□□□□ 0.3
TPM3-219ENST00000509409 PHOX2BQ99453 314 aa16.94■□□□□ 0.3
TPM3-219ENST00000509409 NT5C3AQ9H0P0 336 aa16.94■□□□□ 0.3
TPM3-219ENST00000509409 IRF2BPLQ9H1B7 796 aa16.94■□□□□ 0.3
TPM3-219ENST00000509409 KCNK12Q9HB15 430 aa16.94■□□□□ 0.3
TPM3-219ENST00000509409 FBXL21Q9UKT6 434 aa16.94■□□□□ 0.3
TPM3-219ENST00000509409 E9PMD0 336 aa16.93■□□□□ 0.3
TPM3-219ENST00000509409 ST18O60284 1047 aa16.93■□□□□ 0.3
TPM3-219ENST00000509409 C1RP00736 705 aa16.93■□□□□ 0.3
TPM3-219ENST00000509409 PEX3P56589 373 aa16.93■□□□□ 0.3
TPM3-219ENST00000509409 RABEP1Q15276 862 aa16.93■□□□□ 0.3
TPM3-219ENST00000509409 RTP2Q5QGT7 225 aa16.93■□□□□ 0.3
TPM3-219ENST00000509409 IGSF22Q8N9C0 903 aa16.93■□□□□ 0.3
TPM3-219ENST00000509409 FLCNQ8NFG4 579 aa16.93■□□□□ 0.3
TPM3-219ENST00000509409 CXCL16Q9H2A7 254 aa16.93■□□□□ 0.3
TPM3-219ENST00000509409 ZDHHC7Q9NXF8 308 aa16.93■□□□□ 0.3
TPM3-219ENST00000509409 IGSF9Q9P2J2 1179 aa16.93■□□□□ 0.3
TPM3-219ENST00000509409 CLUHO75153 1309 aa16.93■□□□□ 0.3
TPM3-219ENST00000509409 MYO10Q9HD67 2058 aa16.92■□□□□ 0.3
TPM3-219ENST00000509409 PP2D1A8MPX8 630 aa16.92■□□□□ 0.3
TPM3-219ENST00000509409 LAD1O00515 517 aa16.92■□□□□ 0.3
TPM3-219ENST00000509409 KIF4AO95239 1232 aa16.92■□□□□ 0.3
TPM3-219ENST00000509409 EDN1P05305 212 aa16.92■□□□□ 0.3
TPM3-219ENST00000509409 CDC25AP30304 524 aa16.92■□□□□ 0.3
TPM3-219ENST00000509409 NUBP1P53384 320 aa16.92■□□□□ 0.3
TPM3-219ENST00000509409 YARSP54577 528 aaKnown RBP16.92■□□□□ 0.3
TPM3-219ENST00000509409 ELAVL2Q12926 359 aaKnown RBP16.92■□□□□ 0.3
TPM3-219ENST00000509409 PSMD5Q16401 504 aa16.92■□□□□ 0.3
TPM3-219ENST00000509409 ASTLQ6HA08 431 aaPredicted RBP16.92■□□□□ 0.3
TPM3-219ENST00000509409 LILRA6Q6PI73 481 aa16.92■□□□□ 0.3
TPM3-219ENST00000509409 ZNF707Q96C28 371 aaPredicted RBP16.92■□□□□ 0.3
TPM3-219ENST00000509409 RHOBTB2Q9BYZ6 727 aa16.92■□□□□ 0.3
TPM3-219ENST00000509409 PRKD2Q9BZL6 878 aa16.92■□□□□ 0.3
TPM3-219ENST00000509409 FAM86C1Q9NVL1 165 aa16.92■□□□□ 0.3
TPM3-219ENST00000509409 DAXXQ9UER7 740 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms