RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 PDZD7Q9H5P4 517 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 FAN1Q9Y2M0 1017 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 PRG3Q9Y2Y8 225 aaPredicted RBP12.07□□□□□ -0.48
RNF4-212ENST00000509258 RIF1Q5UIP0 2472 aaKnown RBP12.06□□□□□ -0.48
RNF4-212ENST00000509258 A0A1B0GUA9 196 aa12.06□□□□□ -0.48
RNF4-212ENST00000509258 E9PMD0 336 aa12.06□□□□□ -0.48
RNF4-212ENST00000509258 SOD2P04179 222 aa12.06□□□□□ -0.48
RNF4-212ENST00000509258 ADH1AP07327 375 aa12.06□□□□□ -0.48
RNF4-212ENST00000509258 GJB2P29033 226 aa12.06□□□□□ -0.48
RNF4-212ENST00000509258 PPP4R3CPQ6ZMV5 832 aa12.06□□□□□ -0.48
RNF4-212ENST00000509258 RNF168Q8IYW5 571 aaPredicted RBP12.06□□□□□ -0.48
RNF4-212ENST00000509258 SNX27Q96L92 541 aa12.06□□□□□ -0.48
RNF4-212ENST00000509258 PNMA5Q96PV4 448 aa12.06□□□□□ -0.48
RNF4-212ENST00000509258 RUSC1Q9BVN2 902 aa12.06□□□□□ -0.48
RNF4-212ENST00000509258 TRIM6Q9C030 488 aaPredicted RBP12.06□□□□□ -0.48
RNF4-212ENST00000509258 DDX19AQ9NUU7 478 aaKnown RBP12.06□□□□□ -0.48
RNF4-212ENST00000509258 KIAA1024Q9UPX6 916 aa12.06□□□□□ -0.48
RNF4-212ENST00000509258 DMDP11532 3685 aa12.06□□□□□ -0.48
RNF4-212ENST00000509258 PTPRZ1P23471 2315 aaPredicted RBP12.06□□□□□ -0.48
RNF4-212ENST00000509258 ARHGEF35A5YM69 484 aa12.05□□□□□ -0.48
RNF4-212ENST00000509258 PTGESO14684 152 aa12.05□□□□□ -0.48
RNF4-212ENST00000509258 NBL1P41271 181 aa12.05□□□□□ -0.48
RNF4-212ENST00000509258 MAPK7Q13164 816 aa12.05□□□□□ -0.48
RNF4-212ENST00000509258 TDGQ13569 410 aa12.05□□□□□ -0.48
RNF4-212ENST00000509258 GNL2Q13823 731 aaKnown RBP12.05□□□□□ -0.48
RNF4-212ENST00000509258 FAM187BQ17R55 369 aa12.05□□□□□ -0.48
RNF4-212ENST00000509258 NT5DC1Q5TFE4 455 aa12.05□□□□□ -0.48
RNF4-212ENST00000509258 TAS1R3Q7RTX0 852 aa12.05□□□□□ -0.48
RNF4-212ENST00000509258 MCPH1Q8NEM0 835 aa12.05□□□□□ -0.48
RNF4-212ENST00000509258 FLCNQ8NFG4 579 aa12.05□□□□□ -0.48
RNF4-212ENST00000509258 CMASQ8NFW8 434 aaPredicted RBP12.05□□□□□ -0.48
RNF4-212ENST00000509258 SNX29Q8TEQ0 813 aa12.05□□□□□ -0.48
RNF4-212ENST00000509258 STAMQ92783 540 aa12.05□□□□□ -0.48
RNF4-212ENST00000509258 RPS6KC1Q96S38 1066 aa12.05□□□□□ -0.48
RNF4-212ENST00000509258 HERC2P3Q9BVR0 1158 aa12.05□□□□□ -0.48
RNF4-212ENST00000509258 MAN1C1Q9NR34 630 aa12.05□□□□□ -0.48
RNF4-212ENST00000509258 SNTG2Q9NY99 539 aa12.05□□□□□ -0.48
RNF4-212ENST00000509258 LRWD1Q9UFC0 647 aa12.05□□□□□ -0.48
RNF4-212ENST00000509258 NOL7Q9UMY1 257 aaKnown RBP12.05□□□□□ -0.48
RNF4-212ENST00000509258 DUSP12Q9UNI6 340 aa12.05□□□□□ -0.48
RNF4-212ENST00000509258 FAM186AA6NE01 2351 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 C2CD2LO14523 706 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 GLUD1P00367 558 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 PRKCBP05771 671 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 MYBP10242 640 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 LIG1P18858 919 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 AOC1P19801 751 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 OR1G1P47890 313 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 GLUD2P49448 558 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 GRIN1Q05586 938 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 NAB2Q15742 525 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 CWF19L1Q69YN2 538 aaKnown RBP12.04□□□□□ -0.48
RNF4-212ENST00000509258 MCTP1Q6DN14 999 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 SLC27A1Q6PCB7 646 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 CYP26C1Q6V0L0 522 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 TMEM130Q8N3G9 435 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 ERMNQ8TAM6 284 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 RHOBTB2Q9BYZ6 727 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 GPR62Q9BZJ7 368 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 KCNK12Q9HB15 430 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 IGSF9Q9P2J2 1179 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 DAXXQ9UER7 740 aaPredicted RBP12.04□□□□□ -0.48
RNF4-212ENST00000509258 FBXL21Q9UKT6 434 aa12.04□□□□□ -0.48
RNF4-212ENST00000509258 GVINP1Q7Z2Y8 2422 aa12.03□□□□□ -0.48
RNF4-212ENST00000509258 PRR23AA6NEV1 266 aa12.03□□□□□ -0.48
RNF4-212ENST00000509258 TEX28O15482 410 aa12.03□□□□□ -0.48
RNF4-212ENST00000509258 MEFVO15553 781 aaPredicted RBP12.03□□□□□ -0.48
RNF4-212ENST00000509258 RECQL4O94761 1208 aa12.03□□□□□ -0.48
RNF4-212ENST00000509258 NAMPTP43490 491 aa12.03□□□□□ -0.48
RNF4-212ENST00000509258 ATP2C1P98194 919 aaPredicted RBP12.03□□□□□ -0.48
RNF4-212ENST00000509258 PDIA5Q14554 519 aa12.03□□□□□ -0.48
RNF4-212ENST00000509258 KIAA0319Q5VV43 1072 aa12.03□□□□□ -0.48
RNF4-212ENST00000509258 ASCL5Q7RTU5 278 aa12.03□□□□□ -0.48
RNF4-212ENST00000509258 CEP120Q8N960 986 aa12.03□□□□□ -0.48
RNF4-212ENST00000509258 PLIN2Q99541 437 aa12.03□□□□□ -0.48
RNF4-212ENST00000509258 COLEC11Q9BWP8 271 aa12.03□□□□□ -0.48
RNF4-212ENST00000509258 PRMT7Q9NVM4 692 aaPredicted RBP12.03□□□□□ -0.48
RNF4-212ENST00000509258 PARP2Q9UGN5 583 aa12.03□□□□□ -0.48
RNF4-212ENST00000509258 GIT1Q9Y2X7 761 aa12.03□□□□□ -0.48
RNF4-212ENST00000509258 CLUHO75153 1309 aa12.03□□□□□ -0.48
RNF4-212ENST00000509258 SPTBN4Q9H254 2564 aa12.03□□□□□ -0.48
RNF4-212ENST00000509258 NPHP3-ACAD11A0A0J9YXS1 232 aa12.02□□□□□ -0.49
RNF4-212ENST00000509258 CCDC195A0A1B0GUA6 201 aa12.02□□□□□ -0.49
RNF4-212ENST00000509258 CASTOR2A6NHX0 329 aa12.02□□□□□ -0.49
RNF4-212ENST00000509258 SFI1A8K8P3 1242 aa12.02□□□□□ -0.49
RNF4-212ENST00000509258 ACKR2O00590 384 aa12.02□□□□□ -0.49
RNF4-212ENST00000509258 HIP1RO75146 1068 aa12.02□□□□□ -0.49
RNF4-212ENST00000509258 RPL17P18621 184 aaKnown RBP12.02□□□□□ -0.49
RNF4-212ENST00000509258 MUTP22033 750 aa12.02□□□□□ -0.49
RNF4-212ENST00000509258 GBP2P32456 591 aaPredicted RBP12.02□□□□□ -0.49
RNF4-212ENST00000509258 PRPHP41219 470 aa12.02□□□□□ -0.49
RNF4-212ENST00000509258 DSG1Q02413 1049 aa12.02□□□□□ -0.49
RNF4-212ENST00000509258 CREMQ03060 361 aa12.02□□□□□ -0.49
RNF4-212ENST00000509258 PRPF4BQ13523 1007 aaKnown RBP12.02□□□□□ -0.49
RNF4-212ENST00000509258 HAUS3Q68CZ6 603 aa12.02□□□□□ -0.49
RNF4-212ENST00000509258 RINT1Q6NUQ1 792 aa12.02□□□□□ -0.49
RNF4-212ENST00000509258 C1orf186Q6ZWK4 172 aa12.02□□□□□ -0.49
RNF4-212ENST00000509258 CCDC105Q8IYK2 499 aa12.02□□□□□ -0.49
RNF4-212ENST00000509258 SIX5Q8N196 739 aa12.02□□□□□ -0.49
RNF4-212ENST00000509258 HASPINQ8TF76 798 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms