RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 PTPRHQ9HD43 1115 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 C11orf16Q9NQ32 467 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 STK17AQ9UEE5 414 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 LZTS1Q9Y250 596 aa9.54□□□□□ -0.88
SNCA-211ENST00000508895 PRG3Q9Y2Y8 225 aaPredicted RBP9.54□□□□□ -0.88
SNCA-211ENST00000508895 DOCK8Q8NF50 2099 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 CCDC169A6NNP5 214 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 TISP43B9A030 160 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 RECQL4O94761 1208 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 CXCL14O95715 111 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 PFKFB1P16118 471 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 EPCAMP16422 314 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 GUCY2CP25092 1073 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 STAT6P42226 847 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 UBE3AQ05086 875 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 SOX4Q06945 474 aaPredicted RBP9.53□□□□□ -0.88
SNCA-211ENST00000508895 PRPF4BQ13523 1007 aaKnown RBP9.53□□□□□ -0.88
SNCA-211ENST00000508895 GLRA4Q5JXX5 417 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 ZBTB41Q5SVQ8 909 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 ADALQ6DHV7 355 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 FAM43BQ6ZT52 329 aaPredicted RBP9.53□□□□□ -0.88
SNCA-211ENST00000508895 TMC7Q7Z402 723 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 ZBTB33Q86T24 672 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 DDX53Q86TM3 631 aaKnown RBP9.53□□□□□ -0.88
SNCA-211ENST00000508895 GPBP1Q86WP2 473 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 MRPL43Q8N983 215 aaKnown RBP9.53□□□□□ -0.88
SNCA-211ENST00000508895 SMRP1Q8NCR6 262 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 TMEM161BQ8NDZ6 487 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 DEPTORQ8TB45 409 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 SLC22A17Q8WUG5 538 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 PGBD4Q96DM1 585 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 ACO2Q99798 780 aaKnown RBP9.53□□□□□ -0.88
SNCA-211ENST00000508895 REEP2Q9BRK0 252 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 FGFBP2Q9BYJ0 223 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 GPR62Q9BZJ7 368 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 GOLPH3LQ9H4A5 285 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 GOLGA2P5Q9HBQ8 144 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 ENTPD7Q9NQZ7 604 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 AAASQ9NRG9 546 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 PRMT7Q9NVM4 692 aaPredicted RBP9.53□□□□□ -0.88
SNCA-211ENST00000508895 CCDC39Q9UFE4 941 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 PARP2Q9UGN5 583 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 HPSEQ9Y251 543 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 GDAQ9Y2T3 454 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 DENND4AQ7Z401 1863 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 NOTCH4Q99466 2003 aa9.53□□□□□ -0.88
SNCA-211ENST00000508895 TSC2P49815 1807 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 FAM237AA0A1B0GTK4 181 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 A0A1B0GVL5 298 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 A0A1W2PQ27 194 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 A0A1W2PQ64 194 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 A0A1W2PQD8 194 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 C19orf67A6NJJ6 358 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 CTSAP10619 480 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 MAPTP10636 758 aaKnown RBP9.52□□□□□ -0.89
SNCA-211ENST00000508895 SKIP12755 728 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 PROZP22891 400 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 CMA1P23946 247 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 OR1G1P47890 313 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 ALDH7A1P49419 539 aaKnown RBP9.52□□□□□ -0.89
SNCA-211ENST00000508895 NDUFV1P49821 464 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 OSTNP61366 133 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 RNASELQ05823 741 aaKnown RBP9.52□□□□□ -0.89
SNCA-211ENST00000508895 ZP2Q05996 745 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 GIT2Q14161 759 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 PTPN14Q15678 1187 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 MAPK6Q16659 721 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 ATF7IP2Q5U623 682 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 RRAGBQ5VZM2 374 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 SLC39A4Q6P5W5 647 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 CCDC73Q6ZRK6 1079 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 TMEM87AQ8NBN3 555 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 C3orf58Q8NDZ4 430 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 HASPINQ8TF76 798 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 KIFAP3Q92845 792 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 DHX58Q96C10 678 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 CCDC51Q96ER9 411 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 PRIMPOLQ96LW4 560 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 ZMAT2Q96NC0 199 aaKnown RBP9.52□□□□□ -0.89
SNCA-211ENST00000508895 MRPL9Q9BYD2 267 aaKnown RBP9.52□□□□□ -0.89
SNCA-211ENST00000508895 PANK2Q9BZ23 570 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 KCND2Q9NZV8 630 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 CD207Q9UJ71 328 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 FAN1Q9Y2M0 1017 aa9.52□□□□□ -0.89
SNCA-211ENST00000508895 USP15Q9Y4E8 981 aaPredicted RBP9.52□□□□□ -0.89
SNCA-211ENST00000508895 SCN1AP35498 2009 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 USP34Q70CQ2 3546 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.51□□□□□ -0.89
SNCA-211ENST00000508895 FAM86C2PA6NEL3 165 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 CASTOR2A6NHX0 329 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 MYMKA6NI61 221 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 K7ERI5 159 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 C2CD2LO14523 706 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 N4BP3O15049 544 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 POLR2DO15514 142 aaKnown RBP9.51□□□□□ -0.89
SNCA-211ENST00000508895 ADAM12O43184 909 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 ACTN4O43707 911 aaKnown RBP9.51□□□□□ -0.89
SNCA-211ENST00000508895 CNPP09543 421 aaKnown RBP9.51□□□□□ -0.89
SNCA-211ENST00000508895 PLS3P13797 630 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 RPL17P18621 184 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms