RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 MCF2P10911 925 aa16.51■□□□□ 0.23
TRIO-211ENST00000508343 ABCD1P33897 745 aa16.51■□□□□ 0.23
TRIO-211ENST00000508343 LTBRP36941 435 aa16.51■□□□□ 0.23
TRIO-211ENST00000508343 GRM5P41594 1212 aa16.51■□□□□ 0.23
TRIO-211ENST00000508343 ME1P48163 572 aa16.51■□□□□ 0.23
TRIO-211ENST00000508343 KCNQ1P51787 676 aa16.51■□□□□ 0.23
TRIO-211ENST00000508343 SMC1AQ14683 1233 aaKnown RBP16.51■□□□□ 0.23
TRIO-211ENST00000508343 SHC4Q6S5L8 630 aa16.51■□□□□ 0.23
TRIO-211ENST00000508343 MPZL3Q6UWV2 235 aa16.51■□□□□ 0.23
TRIO-211ENST00000508343 DYMQ7RTS9 669 aa16.51■□□□□ 0.23
TRIO-211ENST00000508343 ZBTB33Q86T24 672 aa16.51■□□□□ 0.23
TRIO-211ENST00000508343 FAM178BQ8IXR5 827 aa16.51■□□□□ 0.23
TRIO-211ENST00000508343 CCDC94Q9BW85 323 aaPredicted RBP16.51■□□□□ 0.23
TRIO-211ENST00000508343 COLEC11Q9BWP8 271 aa16.51■□□□□ 0.23
TRIO-211ENST00000508343 COL25A1Q9BXS0 654 aaPredicted RBP16.51■□□□□ 0.23
TRIO-211ENST00000508343 TBX20Q9UMR3 447 aa16.51■□□□□ 0.23
TRIO-211ENST00000508343 PCDHA7Q9UN72 937 aa16.51■□□□□ 0.23
TRIO-211ENST00000508343 FSD2A1L4K1 749 aa16.5■□□□□ 0.23
TRIO-211ENST00000508343 HIDE1A8MVS5 230 aa16.5■□□□□ 0.23
TRIO-211ENST00000508343 H3BQ06 376 aaPredicted RBP16.5■□□□□ 0.23
TRIO-211ENST00000508343 K7ENM7 598 aa16.5■□□□□ 0.23
TRIO-211ENST00000508343 DLL1O00548 723 aa16.5■□□□□ 0.23
TRIO-211ENST00000508343 PTGESO14684 152 aa16.5■□□□□ 0.23
TRIO-211ENST00000508343 CXCL14O95715 111 aa16.5■□□□□ 0.23
TRIO-211ENST00000508343 THP07101 528 aa16.5■□□□□ 0.23
TRIO-211ENST00000508343 YARSP54577 528 aaKnown RBP16.5■□□□□ 0.23
TRIO-211ENST00000508343 DUSP6Q16828 381 aa16.5■□□□□ 0.23
TRIO-211ENST00000508343 DNAJC19Q96DA6 116 aa16.5■□□□□ 0.23
TRIO-211ENST00000508343 ZBTB45Q96K62 511 aaPredicted RBP16.5■□□□□ 0.23
TRIO-211ENST00000508343 FIZ1Q96SL8 496 aa16.5■□□□□ 0.23
TRIO-211ENST00000508343 ZBP1Q9H171 429 aa16.5■□□□□ 0.23
TRIO-211ENST00000508343 CUEDC2Q9H467 287 aa16.5■□□□□ 0.23
TRIO-211ENST00000508343 PRG3Q9Y2Y8 225 aaPredicted RBP16.5■□□□□ 0.23
TRIO-211ENST00000508343 ATP6V1DQ9Y5K8 247 aa16.5■□□□□ 0.23
TRIO-211ENST00000508343 C2orf71A6NGG8 1288 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 LINC01565O15544 149 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 CLDN3O15551 220 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 CTSAP10619 480 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 GAP43P17677 238 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 NMT1P30419 496 aaKnown RBP16.49■□□□□ 0.23
TRIO-211ENST00000508343 GTF2BQ00403 316 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 DLX2Q07687 328 aaPredicted RBP16.49■□□□□ 0.23
TRIO-211ENST00000508343 MCL1Q07820 350 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 TUSC3Q13454 348 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 E2F4Q16254 413 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 PUS10Q3MIT2 529 aaKnown RBP16.49■□□□□ 0.23
TRIO-211ENST00000508343 CEP120Q8N960 986 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 IQUBQ8NA54 791 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.49■□□□□ 0.23
TRIO-211ENST00000508343 BICD1Q96G01 975 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 ACAP3Q96P50 834 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 VN1R3Q9BXE9 311 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 LRRC27Q9C0I9 530 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 CXCL16Q9H2A7 254 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 ST6GALNAC4Q9H4F1 302 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 TOPORSQ9NS56 1045 aaPredicted RBP16.49■□□□□ 0.23
TRIO-211ENST00000508343 MARCH5Q9NX47 278 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 ANKFY1Q9P2R3 1169 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 SEL1LQ9UBV2 794 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 IRAK3Q9Y616 596 aa16.49■□□□□ 0.23
TRIO-211ENST00000508343 CUL9Q8IWT3 2517 aa16.48■□□□□ 0.23
TRIO-211ENST00000508343 PIGRP01833 764 aa16.48■□□□□ 0.23
TRIO-211ENST00000508343 HARSP12081 509 aaKnown RBP16.48■□□□□ 0.23
TRIO-211ENST00000508343 CA8P35219 290 aa16.48■□□□□ 0.23
TRIO-211ENST00000508343 NDUFV1P49821 464 aa16.48■□□□□ 0.23
TRIO-211ENST00000508343 LIG4P49917 911 aa16.48■□□□□ 0.23
TRIO-211ENST00000508343 OSTNP61366 133 aa16.48■□□□□ 0.23
TRIO-211ENST00000508343 KRT85P78386 507 aa16.48■□□□□ 0.23
TRIO-211ENST00000508343 NOLC1Q14978 699 aaKnown RBP eCLIP16.48■□□□□ 0.23
TRIO-211ENST00000508343 NAB2Q15742 525 aa16.48■□□□□ 0.23
TRIO-211ENST00000508343 XKR4Q5GH76 650 aa16.48■□□□□ 0.23
TRIO-211ENST00000508343 RESP18Q5W5W9 173 aa16.48■□□□□ 0.23
TRIO-211ENST00000508343 ALKAL1Q6UXT8 129 aa16.48■□□□□ 0.23
TRIO-211ENST00000508343 ZNF720Q7Z2F6 126 aa16.48■□□□□ 0.23
TRIO-211ENST00000508343 TNMDQ9H2S6 317 aa16.48■□□□□ 0.23
TRIO-211ENST00000508343 KBTBD4Q9NVX7 518 aa16.48■□□□□ 0.23
TRIO-211ENST00000508343 FAM13BQ9NYF5 915 aa16.48■□□□□ 0.23
TRIO-211ENST00000508343 TTC28Q96AY4 2481 aa16.48■□□□□ 0.23
TRIO-211ENST00000508343 TDRD15B5MCY1 1934 aaKnown RBP16.47■□□□□ 0.23
TRIO-211ENST00000508343 HNRNPDLO14979 420 aaKnown RBP16.47■□□□□ 0.23
TRIO-211ENST00000508343 POLR2DO15514 142 aaKnown RBP16.47■□□□□ 0.23
TRIO-211ENST00000508343 EFEMP2O95967 443 aa16.47■□□□□ 0.23
TRIO-211ENST00000508343 SOD2P04179 222 aa16.47■□□□□ 0.23
TRIO-211ENST00000508343 IDEP14735 1019 aa16.47■□□□□ 0.23
TRIO-211ENST00000508343 MATR3P43243 847 aaKnown RBP eCLIP16.47■□□□□ 0.23
TRIO-211ENST00000508343 AMPD3Q01432 767 aa16.47■□□□□ 0.23
TRIO-211ENST00000508343 HSP90AA2PQ14568 343 aaPredicted RBP16.47■□□□□ 0.23
TRIO-211ENST00000508343 ZC2HC1CQ53FD0 456 aaPredicted RBP16.47■□□□□ 0.23
TRIO-211ENST00000508343 HERC4Q5GLZ8 1057 aaPredicted RBP16.47■□□□□ 0.23
TRIO-211ENST00000508343 PTCRAQ6ISU1 281 aaPredicted RBP16.47■□□□□ 0.23
TRIO-211ENST00000508343 TMEM184AQ6ZMB5 413 aa16.47■□□□□ 0.23
TRIO-211ENST00000508343 SFR1Q86XK3 245 aa16.47■□□□□ 0.23
TRIO-211ENST00000508343 MAP4K3Q8IVH8 894 aa16.47■□□□□ 0.23
TRIO-211ENST00000508343 TMEM87AQ8NBN3 555 aa16.47■□□□□ 0.23
TRIO-211ENST00000508343 ADAMTS19Q8TE59 1207 aa16.47■□□□□ 0.23
TRIO-211ENST00000508343 LEO1Q8WVC0 666 aaPredicted RBP16.47■□□□□ 0.23
TRIO-211ENST00000508343 AUTS2Q8WXX7 1259 aa16.47■□□□□ 0.23
TRIO-211ENST00000508343 DHX58Q96C10 678 aa16.47■□□□□ 0.23
TRIO-211ENST00000508343 SPATA32Q96LK8 384 aa16.47■□□□□ 0.23
TRIO-211ENST00000508343 PPP1R10Q96QC0 940 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms