RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 SWSAP1Q6NVH7 229 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 FBXL13Q8NEE6 735 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 DDX1Q92499 740 aaKnown RBP11.73□□□□□ -0.53
LIN54-207ENST00000508171 RNF25Q96BH1 459 aaPredicted RBP11.73□□□□□ -0.53
LIN54-207ENST00000508171 TIPINQ9BVW5 301 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 WNT8AQ9H1J5 351 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 TMEM8AQ9HCN3 771 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 EXOC7Q9UPT5 735 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 PCDHA3Q9Y5H8 950 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 CTNND1O60716 968 aaKnown RBP11.73□□□□□ -0.53
LIN54-207ENST00000508171 ZBED4O75132 1171 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 RGS20O76081 388 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 MTA2O94776 668 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 STBD1O95210 358 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 CYP1A2P05177 515 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 RXRBP28702 533 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 PMS2P54278 862 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 MCCD1P59942 119 aaPredicted RBP11.73□□□□□ -0.53
LIN54-207ENST00000508171 PPP2R2AP63151 447 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 CDR2Q01850 454 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 AGBL2Q5U5Z8 902 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 CIAPIN1Q6FI81 312 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 B4GALNT4Q76KP1 1039 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 SAMD7Q7Z3H4 446 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 PHLDB2Q86SQ0 1253 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 NLRX1Q86UT6 975 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 VSIG10LQ86VR7 867 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 ARFGAP2Q8N6H7 521 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 MFSD14AQ96MC6 490 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 NT5C1BQ96P26 610 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 NTPCRQ9BSD7 190 aaKnown RBP11.73□□□□□ -0.53
LIN54-207ENST00000508171 SEMA4AQ9H3S1 761 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 RNF146Q9NTX7 359 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 PCYOX1Q9UHG3 505 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 MYH9P35579 1960 aaKnown RBP11.73□□□□□ -0.53
LIN54-207ENST00000508171 HNRNPDLO14979 420 aaKnown RBP11.73□□□□□ -0.53
LIN54-207ENST00000508171 FAM107AO95990 144 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 RARAP10276 462 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 KRT5P13647 590 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 CHRNA3P32297 505 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 CYP24A1Q07973 514 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 SLC29A2Q14542 456 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 C2CD6Q53TS8 623 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 SEL1L2Q5TEA6 688 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 LMBRD2Q68DH5 695 aaPredicted RBP11.73□□□□□ -0.53
LIN54-207ENST00000508171 UHMK1Q8TAS1 419 aaKnown RBP11.73□□□□□ -0.53
LIN54-207ENST00000508171 MDM1Q8TC05 714 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 FBXL18Q96ME1 805 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 FAM213AQ9BRX8 229 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 TRIM7Q9C029 511 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 PABPC3Q9H361 631 aaKnown RBP11.73□□□□□ -0.53
LIN54-207ENST00000508171 PDE6CP51160 858 aa11.72□□□□□ -0.53
LIN54-207ENST00000508171 DRG2P55039 364 aaKnown RBP11.72□□□□□ -0.53
LIN54-207ENST00000508171 SIX1Q15475 284 aaPredicted RBP11.72□□□□□ -0.53
LIN54-207ENST00000508171 NBPF12Q5TAG4 269 aaPredicted RBP11.72□□□□□ -0.53
LIN54-207ENST00000508171 PRAMEF18Q5VWM3 479 aa11.72□□□□□ -0.53
LIN54-207ENST00000508171 LLGL2Q6P1M3 1020 aa11.72□□□□□ -0.53
LIN54-207ENST00000508171 TAS1R3Q7RTX0 852 aa11.72□□□□□ -0.53
LIN54-207ENST00000508171 SLC13A5Q86YT5 568 aaPredicted RBP11.72□□□□□ -0.53
LIN54-207ENST00000508171 CCDC105Q8IYK2 499 aa11.72□□□□□ -0.53
LIN54-207ENST00000508171 ZNF516Q92618 1163 aa11.72□□□□□ -0.53
LIN54-207ENST00000508171 ZKSCAN4Q969J2 545 aaPredicted RBP11.72□□□□□ -0.53
LIN54-207ENST00000508171 PARP14Q460N5 1801 aa11.72□□□□□ -0.53
LIN54-207ENST00000508171 TLDC2A0PJX2 215 aa11.72□□□□□ -0.53
LIN54-207ENST00000508171 GMNCA6NCL1 334 aa11.72□□□□□ -0.53
LIN54-207ENST00000508171 SMIM23A6NLE4 172 aa11.72□□□□□ -0.53
LIN54-207ENST00000508171 ERLIN2O94905 339 aa11.72□□□□□ -0.53
LIN54-207ENST00000508171 WNT7BP56706 349 aa11.72□□□□□ -0.53
LIN54-207ENST00000508171 CLUL1Q15846 466 aa11.72□□□□□ -0.53
LIN54-207ENST00000508171 QPCTQ16769 361 aa11.72□□□□□ -0.53
LIN54-207ENST00000508171 TTC31Q49AM3 519 aaPredicted RBP11.72□□□□□ -0.53
LIN54-207ENST00000508171 ACAD10Q6JQN1 1059 aa11.72□□□□□ -0.53
LIN54-207ENST00000508171 SLC17A8Q8NDX2 589 aa11.72□□□□□ -0.53
LIN54-207ENST00000508171 XPNPEP1Q9NQW7 623 aa11.72□□□□□ -0.53
LIN54-207ENST00000508171 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.72□□□□□ -0.53
LIN54-207ENST00000508171 RASAL2Q9UJF2 1139 aa11.72□□□□□ -0.53
LIN54-207ENST00000508171 GTF3C4Q9UKN8 822 aa11.72□□□□□ -0.53
LIN54-207ENST00000508171 PNMA2Q9UL42 364 aa11.72□□□□□ -0.53
LIN54-207ENST00000508171 ARID2Q68CP9 1835 aa11.71□□□□□ -0.53
LIN54-207ENST00000508171 CLDN3O15551 220 aa11.71□□□□□ -0.53
LIN54-207ENST00000508171 MEFVO15553 781 aaPredicted RBP11.71□□□□□ -0.53
LIN54-207ENST00000508171 TRAPPC3O43617 180 aa11.71□□□□□ -0.53
LIN54-207ENST00000508171 KCNA2P16389 499 aa11.71□□□□□ -0.53
LIN54-207ENST00000508171 COILP38432 576 aaPredicted RBP11.71□□□□□ -0.53
LIN54-207ENST00000508171 DAB2IPQ5VWQ8 1189 aa11.71□□□□□ -0.53
LIN54-207ENST00000508171 SNRNP48Q6IEG0 339 aaKnown RBP11.71□□□□□ -0.53
LIN54-207ENST00000508171 OTUD6AQ7L8S5 288 aa11.71□□□□□ -0.53
LIN54-207ENST00000508171 CCDC60Q8IWA6 550 aaPredicted RBP11.71□□□□□ -0.53
LIN54-207ENST00000508171 TMC2Q8TDI7 906 aa11.71□□□□□ -0.53
LIN54-207ENST00000508171 CPA5Q8WXQ8 436 aa11.71□□□□□ -0.53
LIN54-207ENST00000508171 RAPGEF5Q92565 580 aa11.71□□□□□ -0.53
LIN54-207ENST00000508171 KAT2BQ92831 832 aa11.71□□□□□ -0.53
LIN54-207ENST00000508171 KIFAP3Q92845 792 aa11.71□□□□□ -0.53
LIN54-207ENST00000508171 BICD1Q96G01 975 aa11.71□□□□□ -0.53
LIN54-207ENST00000508171 PDLIM7Q9NR12 457 aa11.71□□□□□ -0.53
LIN54-207ENST00000508171 PODXLO00592 558 aa11.71□□□□□ -0.54
LIN54-207ENST00000508171 HSPA6P17066 643 aa11.71□□□□□ -0.54
LIN54-207ENST00000508171 CCND2P30279 289 aa11.71□□□□□ -0.54
LIN54-207ENST00000508171 CYFIP1Q7L576 1253 aa11.71□□□□□ -0.54
LIN54-207ENST00000508171 GPD1LQ8N335 351 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms