RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 SASH1O94885 1247 aa7.51□□□□□ -1.21
HERC4-213ENST00000506515 CNOT4O95628 575 aaKnown RBP7.51□□□□□ -1.21
HERC4-213ENST00000506515 AMY1AP04745 511 aa7.51□□□□□ -1.21
HERC4-213ENST00000506515 CFPP27918 469 aa7.51□□□□□ -1.21
HERC4-213ENST00000506515 USP14P54578 494 aa7.51□□□□□ -1.21
HERC4-213ENST00000506515 SAFB2Q14151 953 aaKnown RBP eCLIP7.51□□□□□ -1.21
HERC4-213ENST00000506515 KHDC1Q4VXA5 237 aaKnown RBP7.51□□□□□ -1.21
HERC4-213ENST00000506515 PRAMEF14Q5SWL7 426 aa7.51□□□□□ -1.21
HERC4-213ENST00000506515 THEMIS2Q5TEJ8 643 aa7.51□□□□□ -1.21
HERC4-213ENST00000506515 ARHGEF18Q6ZSZ5 1173 aa7.51□□□□□ -1.21
HERC4-213ENST00000506515 TRMT2AQ8IZ69 625 aaKnown RBP7.51□□□□□ -1.21
HERC4-213ENST00000506515 RABGGTAQ92696 567 aa7.51□□□□□ -1.21
HERC4-213ENST00000506515 CYFIP2Q96F07 1278 aa7.51□□□□□ -1.21
HERC4-213ENST00000506515 VRK1Q99986 396 aaPredicted RBP7.51□□□□□ -1.21
HERC4-213ENST00000506515 TMEM140Q9NV12 185 aa7.51□□□□□ -1.21
HERC4-213ENST00000506515 STXBP5LQ9Y2K9 1186 aa7.51□□□□□ -1.21
HERC4-213ENST00000506515 ZMYM3Q14202 1370 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 MATN2O00339 956 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 PLIN1O60240 522 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 GPR32O75388 356 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 DDCP20711 480 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 FPR1P21462 350 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 NPEPPSP55786 919 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 RIN1Q13671 783 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 COBLL1Q53SF7 1204 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 GADL1Q6ZQY3 521 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 CCDC149Q6ZUS6 474 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 CHST15Q7LFX5 561 aaPredicted RBP7.5□□□□□ -1.21
HERC4-213ENST00000506515 ADGRE4PQ86SQ3 457 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 LGI4Q8N135 537 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 C3orf20Q8ND61 904 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 KLHDC4Q8TBB5 520 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 TTC17Q96AE7 1141 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 NEIL1Q96FI4 390 aaPredicted RBP7.5□□□□□ -1.21
HERC4-213ENST00000506515 DMRTA2Q96SC8 542 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 DPYSL5Q9BPU6 564 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 LRFN3Q9BTN0 628 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 SARGQ9BW04 601 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 B3GNT5Q9BYG0 378 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 IL23AQ9NPF7 189 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 PCDHA3Q9Y5H8 950 aa7.5□□□□□ -1.21
HERC4-213ENST00000506515 ADAMTS20P59510 1910 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 A0A1W2PRX2 142 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 UBE2QL1A1L167 161 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 WNT10BO00744 389 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 TPP1O14773 563 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 SLC16A6O15403 523 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 CDC14BO60729 498 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 TRIM13O60858 407 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 TRIM27P14373 513 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 PCSK1P29120 753 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 GUCY1A2P33402 732 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 TXKP42681 527 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 PPP2CBP62714 309 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 PPP2CAP67775 309 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 APBA1Q02410 837 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 NOGQ13253 232 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 NPNTQ6UXI9 565 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 PDZD4Q76G19 769 aaPredicted RBP7.49□□□□□ -1.21
HERC4-213ENST00000506515 PLEKHH3Q7Z736 793 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 DAAM2Q86T65 1068 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 SP8Q8IXZ3 490 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 SH2D3CQ8N5H7 860 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 FAM156AQ8NDB6 213 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 SHCBP1Q8NEM2 672 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 MRGPRX4Q96LA9 322 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 LRRC37BQ96QE4 947 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 EPC1Q9H2F5 836 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 TMEM60Q9H2L4 133 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 ARMT1Q9H993 441 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 POLHQ9Y253 713 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 RUVBL1Q9Y265 456 aaKnown RBP7.49□□□□□ -1.21
HERC4-213ENST00000506515 ACTL7AQ9Y615 435 aa7.49□□□□□ -1.21
HERC4-213ENST00000506515 FAM227AF5H4B4 570 aa7.48□□□□□ -1.21
HERC4-213ENST00000506515 HK3P52790 923 aa7.48□□□□□ -1.21
HERC4-213ENST00000506515 ZNF280AP59817 542 aaPredicted RBP7.48□□□□□ -1.21
HERC4-213ENST00000506515 PURAQ00577 322 aaKnown RBP7.48□□□□□ -1.21
HERC4-213ENST00000506515 SRGAP1Q7Z6B7 1085 aa7.48□□□□□ -1.21
HERC4-213ENST00000506515 ZSCAN18Q8TBC5 510 aaPredicted RBP7.48□□□□□ -1.21
HERC4-213ENST00000506515 IFI44Q8TCB0 444 aa7.48□□□□□ -1.21
HERC4-213ENST00000506515 ARL8AQ96BM9 186 aa7.48□□□□□ -1.21
HERC4-213ENST00000506515 IL17RAQ96F46 866 aa7.48□□□□□ -1.21
HERC4-213ENST00000506515 CDK5RAP3Q96JB5 506 aa7.48□□□□□ -1.21
HERC4-213ENST00000506515 SAMD11Q96NU1 681 aa7.48□□□□□ -1.21
HERC4-213ENST00000506515 LMF1Q96S06 567 aa7.48□□□□□ -1.21
HERC4-213ENST00000506515 AGO3Q9H9G7 860 aaKnown RBP7.48□□□□□ -1.21
HERC4-213ENST00000506515 OAZ3Q9UMX2 235 aa7.48□□□□□ -1.21
HERC4-213ENST00000506515 H3BUI4 141 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 ZBED1O96006 694 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 NBPF7P0C2Y1 421 aaPredicted RBP7.47□□□□□ -1.21
HERC4-213ENST00000506515 RAP2AP10114 183 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 IL2RBP14784 551 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 BMP7P18075 431 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 RHCEP18577 417 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 CR2P20023 1033 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 GZMKP49863 264 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 ATP8B2P98198 1209 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 RHDQ02161 417 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 MTM1Q13496 603 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 RAB39AQ14964 217 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms