RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 DSC1Q08554 894 aa18.26■□□□□ 0.51
SNCA-209ENST00000506244 HERC4Q5GLZ8 1057 aaPredicted RBP18.26■□□□□ 0.51
SNCA-209ENST00000506244 ZBTB33Q86T24 672 aa18.26■□□□□ 0.51
SNCA-209ENST00000506244 ZNF280BQ86YH2 543 aa18.26■□□□□ 0.51
SNCA-209ENST00000506244 IGSF21Q96ID5 467 aa18.26■□□□□ 0.51
SNCA-209ENST00000506244 NGRNQ9NPE2 291 aaKnown RBP18.26■□□□□ 0.51
SNCA-209ENST00000506244 ENTPD7Q9NQZ7 604 aa18.26■□□□□ 0.51
SNCA-209ENST00000506244 KLK14Q9P0G3 267 aa18.26■□□□□ 0.51
SNCA-209ENST00000506244 DNAJB4Q9UDY4 337 aa18.26■□□□□ 0.51
SNCA-209ENST00000506244 EXOC7Q9UPT5 735 aa18.26■□□□□ 0.51
SNCA-209ENST00000506244 FAN1Q9Y2M0 1017 aa18.26■□□□□ 0.51
SNCA-209ENST00000506244 ABLIM1O14639 778 aa18.25■□□□□ 0.51
SNCA-209ENST00000506244 DDHD2O94830 711 aa18.25■□□□□ 0.51
SNCA-209ENST00000506244 CSPG5O95196 566 aa18.25■□□□□ 0.51
SNCA-209ENST00000506244 ALDH2P05091 517 aa18.25■□□□□ 0.51
SNCA-209ENST00000506244 THP07101 528 aa18.25■□□□□ 0.51
SNCA-209ENST00000506244 SLFN14P0C7P3 912 aa18.25■□□□□ 0.51
SNCA-209ENST00000506244 HARSP12081 509 aaKnown RBP18.25■□□□□ 0.51
SNCA-209ENST00000506244 AFF1P51825 1210 aaKnown RBP18.25■□□□□ 0.51
SNCA-209ENST00000506244 TCEAL5Q5H9L2 206 aa18.25■□□□□ 0.51
SNCA-209ENST00000506244 ZNF720Q7Z2F6 126 aa18.25■□□□□ 0.51
SNCA-209ENST00000506244 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.25■□□□□ 0.51
SNCA-209ENST00000506244 COLGALT2Q8IYK4 626 aa18.25■□□□□ 0.51
SNCA-209ENST00000506244 MICAL1Q8TDZ2 1067 aa18.25■□□□□ 0.51
SNCA-209ENST00000506244 CCDC34Q96HJ3 373 aa18.25■□□□□ 0.51
SNCA-209ENST00000506244 PCDHB13Q9Y5F0 798 aa18.25■□□□□ 0.51
SNCA-209ENST00000506244 TCHHQ07283 1943 aa18.25■□□□□ 0.51
SNCA-209ENST00000506244 ATG2AQ2TAZ0 1938 aa18.25■□□□□ 0.51
SNCA-209ENST00000506244 GOLGA6L4A6NEF3 574 aa18.24■□□□□ 0.51
SNCA-209ENST00000506244 GCNT3O95395 438 aa18.24■□□□□ 0.51
SNCA-209ENST00000506244 DNAJB1P25685 340 aa18.24■□□□□ 0.51
SNCA-209ENST00000506244 OR1G1P47890 313 aa18.24■□□□□ 0.51
SNCA-209ENST00000506244 COASYQ13057 564 aa18.24■□□□□ 0.51
SNCA-209ENST00000506244 TUSC3Q13454 348 aa18.24■□□□□ 0.51
SNCA-209ENST00000506244 CAMK1Q14012 370 aa18.24■□□□□ 0.51
SNCA-209ENST00000506244 AAK1Q2M2I8 961 aa18.24■□□□□ 0.51
SNCA-209ENST00000506244 DDX53Q86TM3 631 aaKnown RBP18.24■□□□□ 0.51
SNCA-209ENST00000506244 GSTCDQ8NEC7 633 aa18.24■□□□□ 0.51
SNCA-209ENST00000506244 STAMQ92783 540 aa18.24■□□□□ 0.51
SNCA-209ENST00000506244 HLA-CQ95604 372 aa18.24■□□□□ 0.51
SNCA-209ENST00000506244 CHAMP1Q96JM3 812 aa18.24■□□□□ 0.51
SNCA-209ENST00000506244 ACAP3Q96P50 834 aa18.24■□□□□ 0.51
SNCA-209ENST00000506244 ACCSQ96QU6 501 aa18.24■□□□□ 0.51
SNCA-209ENST00000506244 C7orf25Q9BPX7 421 aa18.24■□□□□ 0.51
SNCA-209ENST00000506244 TCF25Q9BQ70 676 aa18.24■□□□□ 0.51
SNCA-209ENST00000506244 SLC38A7Q9NVC3 462 aa18.24■□□□□ 0.51
SNCA-209ENST00000506244 HPSEQ9Y251 543 aa18.24■□□□□ 0.51
SNCA-209ENST00000506244 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.24■□□□□ 0.51
SNCA-209ENST00000506244 FAM237AA0A1B0GTK4 181 aa18.23■□□□□ 0.51
SNCA-209ENST00000506244 A0A1B0GVL5 298 aa18.23■□□□□ 0.51
SNCA-209ENST00000506244 NT5C1B-RDH14C9J2C7 533 aa18.23■□□□□ 0.51
SNCA-209ENST00000506244 NRP1O14786 923 aa18.23■□□□□ 0.51
SNCA-209ENST00000506244 FSCN2O14926 492 aa18.23■□□□□ 0.51
SNCA-209ENST00000506244 B4GALT3O60512 393 aa18.23■□□□□ 0.51
SNCA-209ENST00000506244 PPP1R37O75864 691 aa18.23■□□□□ 0.51
SNCA-209ENST00000506244 MYL1P05976 194 aa18.23■□□□□ 0.51
SNCA-209ENST00000506244 SYKP43405 635 aa18.23■□□□□ 0.51
SNCA-209ENST00000506244 SMC1AQ14683 1233 aaKnown RBP18.23■□□□□ 0.51
SNCA-209ENST00000506244 L1TD1Q5T7N2 865 aaKnown RBP18.23■□□□□ 0.51
SNCA-209ENST00000506244 SLFN12LQ6IEE8 588 aa18.23■□□□□ 0.51
SNCA-209ENST00000506244 TMC7Q7Z402 723 aa18.23■□□□□ 0.51
SNCA-209ENST00000506244 CEP120Q8N960 986 aa18.23■□□□□ 0.51
SNCA-209ENST00000506244 FSIP1Q8NA03 581 aa18.23■□□□□ 0.51
SNCA-209ENST00000506244 SNX27Q96L92 541 aa18.23■□□□□ 0.51
SNCA-209ENST00000506244 CDCA3Q99618 268 aaPredicted RBP18.23■□□□□ 0.51
SNCA-209ENST00000506244 COLEC11Q9BWP8 271 aa18.23■□□□□ 0.51
SNCA-209ENST00000506244 PRG3Q9Y2Y8 225 aaPredicted RBP18.23■□□□□ 0.51
SNCA-209ENST00000506244 EYSQ5T1H1 3165 aa18.22■□□□□ 0.51
SNCA-209ENST00000506244 PTGESO14684 152 aa18.22■□□□□ 0.51
SNCA-209ENST00000506244 OGTO15294 1046 aa18.22■□□□□ 0.51
SNCA-209ENST00000506244 ACTN4O43707 911 aaKnown RBP18.22■□□□□ 0.51
SNCA-209ENST00000506244 CLTAP09496 248 aa18.22■□□□□ 0.51
SNCA-209ENST00000506244 IRS1P35568 1242 aa18.22■□□□□ 0.51
SNCA-209ENST00000506244 OSTNP61366 133 aa18.22■□□□□ 0.51
SNCA-209ENST00000506244 ZC2HC1CQ53FD0 456 aaPredicted RBP18.22■□□□□ 0.51
SNCA-209ENST00000506244 PLPP4Q5VZY2 271 aa18.22■□□□□ 0.51
SNCA-209ENST00000506244 UNC13DQ70J99 1090 aa18.22■□□□□ 0.51
SNCA-209ENST00000506244 TMEM173Q86WV6 379 aaPredicted RBP18.22■□□□□ 0.51
SNCA-209ENST00000506244 ATXN2LQ8WWM7 1075 aaKnown RBP18.22■□□□□ 0.51
SNCA-209ENST00000506244 ZBTB45Q96K62 511 aaPredicted RBP18.22■□□□□ 0.51
SNCA-209ENST00000506244 UROC1Q96N76 676 aa18.22■□□□□ 0.51
SNCA-209ENST00000506244 MSTO1Q9BUK6 570 aa18.22■□□□□ 0.51
SNCA-209ENST00000506244 TMEM206Q9H813 350 aa18.22■□□□□ 0.51
SNCA-209ENST00000506244 GDPD2Q9HCC8 539 aa18.22■□□□□ 0.51
SNCA-209ENST00000506244 MIOSQ9NXC5 875 aa18.22■□□□□ 0.51
SNCA-209ENST00000506244 TBC1D7Q9P0N9 293 aa18.22■□□□□ 0.51
SNCA-209ENST00000506244 SERTAD1Q9UHV2 236 aa18.22■□□□□ 0.51
SNCA-209ENST00000506244 CITO14578 2027 aa18.22■□□□□ 0.51
SNCA-209ENST00000506244 PVALEFA0A1B0GWK0 134 aa18.21■□□□□ 0.51
SNCA-209ENST00000506244 SRGAP2BP0DMP2 458 aa18.21■□□□□ 0.51
SNCA-209ENST00000506244 AFMP43652 599 aa18.21■□□□□ 0.51
SNCA-209ENST00000506244 HSP90AA2PQ14568 343 aaPredicted RBP18.21■□□□□ 0.51
SNCA-209ENST00000506244 POSTNQ15063 836 aa18.21■□□□□ 0.51
SNCA-209ENST00000506244 FAM26FQ5R3K3 315 aa18.21■□□□□ 0.51
SNCA-209ENST00000506244 SYCP3Q8IZU3 236 aa18.21■□□□□ 0.51
SNCA-209ENST00000506244 VPS52Q8N1B4 723 aa18.21■□□□□ 0.51
SNCA-209ENST00000506244 PABPC5Q96DU9 382 aaKnown RBP18.21■□□□□ 0.51
SNCA-209ENST00000506244 STRA6Q9BX79 667 aa18.21■□□□□ 0.51
SNCA-209ENST00000506244 ZBP1Q9H171 429 aa18.21■□□□□ 0.51
SNCA-209ENST00000506244 UBE2ZQ9H832 354 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms