RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 IFNL3Q8IZI9 196 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 RNF149Q8NC42 400 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 OR10G6Q8NH81 332 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 RSPH1Q8WYR4 309 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 ENAMQ9NRM1 1142 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 CAPN11Q9UMQ6 739 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 SLC9A8Q9Y2E8 581 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 SNX8Q9Y5X2 465 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 CCL16O15467 120 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 HLA-DQA2P01906 255 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 GAP43P17677 238 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 CHI3L1P36222 383 aaPredicted RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 ADKP55263 362 aaKnown RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 SESN2P58004 480 aaPredicted RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 PDAP1Q13442 181 aaKnown RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 SEPT2Q15019 361 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 SF3B3Q15393 1217 aaKnown RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 SHROOM1Q2M3G4 852 aaPredicted RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 C16orf46Q6P387 395 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 P4HA3Q7Z4N8 544 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 RASGRP3Q8IV61 690 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 BRSK2Q8IWQ3 736 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 LINS1Q8NG48 757 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 ATOH1Q92858 354 aaPredicted RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 GLMNQ92990 594 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 SERAC1Q96JX3 654 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 DHX36Q9H2U1 1008 aaKnown RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 H2AFY2Q9P0M6 372 aaPredicted RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 LARSQ9P2J5 1176 aaKnown RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 NAGPAQ9UK23 515 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 INTUQ9ULD6 942 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 SLC16A4O15374 487 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 ADCY3O60266 1144 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 ALDH2P05091 517 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 CREB1P16220 341 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 PHKA1P46020 1223 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 ALDH9A1P49189 494 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 CTCFP49711 727 aaPredicted RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 AP3B2Q13367 1082 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 KBTBD12Q3ZCT8 623 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 EFCAB12Q6NXP0 572 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 C8orf74Q6P047 294 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 MARK2Q7KZI7 788 aaKnown RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 CCDC84Q86UT8 332 aaPredicted RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 TRMT44Q8IYL2 757 aaKnown RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 IGSF22Q8N9C0 903 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 CD99L2Q8TCZ2 262 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 FAR1Q8WVX9 515 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 TMEM87BQ96K49 555 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 CINPQ9BW66 212 aaPredicted RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 MRPL4Q9BYD3 311 aaKnown RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 TMEM39BQ9GZU3 492 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 TBK1Q9UHD2 729 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 CARMIL3Q8ND23 1372 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 KCNQ3O43525 872 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 PEX1O43933 1283 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 CDK8P49336 464 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 AP2B1P63010 937 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 FOXM1Q08050 763 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 EPC2Q52LR7 807 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 ANKRD20A3Q5VUR7 823 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 CENPPQ6IPU0 288 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 RNF44Q7L0R7 432 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 SCAIQ8N9R8 606 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 ST13P5Q8NFI4 369 aaPredicted RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 P3H4Q92791 437 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 EDC3Q96F86 508 aaKnown RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 PHACTR3Q96KR7 559 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 MYLK2Q9H1R3 596 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 LATS2Q9NRM7 1088 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 DPP7Q9UHL4 492 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 SH3BGRL2Q9UJC5 107 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 H7C1W4 665 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 CYTH3O43739 400 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 CCNT2O60583 730 aaKnown RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 GNA14O95837 355 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 HIST1H2AGP0C0S8 130 aaPredicted RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 PHKG2P15735 406 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 HIST1H2ADP20671 130 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 HSD3B2P26439 372 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 VAV2P52735 878 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 PNOCQ13519 176 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 RPS6KA1Q15418 735 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 SMU1Q2TAY7 513 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 PRAMEF19Q5SWL8 479 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 CATSPER3Q86XQ3 398 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 ANKRD13AQ8IZ07 590 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 ANKRD44Q8N8A2 993 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 HIST1H2AHQ96KK5 128 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 HIST1H2AJQ99878 128 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 H2AFJQ9BTM1 129 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 XPNPEP3Q9NQH7 507 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 DNAJC17Q9NVM6 304 aaKnown RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 DONSONQ9NYP3 566 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 USE1Q9NZ43 259 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 IL1RAPL1Q9NZN1 696 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 RPH3AQ9Y2J0 694 aaPredicted RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 L3MBTL1Q9Y468 752 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 MLH3Q9UHC1 1453 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 FAM227AF5H4B4 570 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms