RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 SP8Q8IXZ3 490 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 C12orf50Q8NA57 414 aaPredicted RBP12.74□□□□□ -0.37
UBE3D-206ENST00000505226 LXNQ9BS40 222 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 ZC3H12CQ9C0D7 883 aaKnown RBP12.74□□□□□ -0.37
UBE3D-206ENST00000505226 TMEM117Q9H0C3 514 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 PI4KBQ9UBF8 816 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 PRKAG3Q9UGI9 489 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 UBE4BO95155 1302 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 PASKQ96RG2 1323 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 KDM4FA0A1W2PPD8 638 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 CFAP73A6NFT4 308 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 GAS7O60861 476 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 ECEL1O95672 775 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 CYP1A2P05177 515 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 GBP1P32455 592 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 ZKSCAN8Q15776 578 aaPredicted RBP12.74□□□□□ -0.37
UBE3D-206ENST00000505226 KIAA0825Q8IV33 1275 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 DYDC1Q8WWB3 177 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 NACC1Q96RE7 527 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 ROPN1BQ9BZX4 212 aaPredicted RBP12.74□□□□□ -0.37
UBE3D-206ENST00000505226 ROPN1Q9HAT0 212 aaPredicted RBP12.74□□□□□ -0.37
UBE3D-206ENST00000505226 LRRC37AA6NMS7 1700 aa12.74□□□□□ -0.37
UBE3D-206ENST00000505226 K7ENM7 598 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 CDC25CP30307 473 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 TMEM63BQ5T3F8 832 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 DAB2IPQ5VWQ8 1189 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 B3GNT9Q6UX72 402 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 TRMT10CQ7L0Y3 403 aaKnown RBP12.73□□□□□ -0.37
UBE3D-206ENST00000505226 FAXDC2Q96IV6 333 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 GOLGA8IPA6NC78 632 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 GOLGA8JA6NMD2 632 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 DDX39AO00148 427 aaKnown RBP12.73□□□□□ -0.37
UBE3D-206ENST00000505226 GRIN3BO60391 1043 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 GJB6O95452 261 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 GH2P01242 217 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 RFX1P22670 979 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 ECE1P42892 770 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 COPS2P61201 443 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 RASA3Q14644 834 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 TMEM179Q6ZVK1 233 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 ASRGL1Q7L266 308 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 PRUNE1Q86TP1 453 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 CKAP2Q8WWK9 683 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 ZNF570Q96NI8 536 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 KCNK9Q9NPC2 374 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 HOMER3Q9NSC5 361 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 TBK1Q9UHD2 729 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 MTUS1Q9ULD2 1270 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 C15orf41Q9Y2V0 281 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 LY75O60449 1722 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 FSCN2O14926 492 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 KIF1CO43896 1103 aaKnown RBP12.73□□□□□ -0.37
UBE3D-206ENST00000505226 ADRB2P07550 413 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 GBP2P32456 591 aaPredicted RBP12.73□□□□□ -0.37
UBE3D-206ENST00000505226 ABCB5Q2M3G0 1257 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 LLGL2Q6P1M3 1020 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 EP400NLQ6ZTU2 488 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 INTS8Q75QN2 995 aaKnown RBP12.73□□□□□ -0.37
UBE3D-206ENST00000505226 ZDHHC15Q96MV8 337 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 SERPINB12Q96P63 405 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 FAM118BQ9BPY3 351 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 NSRP1Q9H0G5 558 aaKnown RBP12.73□□□□□ -0.37
UBE3D-206ENST00000505226 STMN4Q9H169 189 aaPredicted RBP12.73□□□□□ -0.37
UBE3D-206ENST00000505226 ARHGEF3Q9NR81 526 aa12.73□□□□□ -0.37
UBE3D-206ENST00000505226 R3HDM2Q9Y2K5 976 aaKnown RBP12.73□□□□□ -0.37
UBE3D-206ENST00000505226 KLRG2A4D1S0 409 aaPredicted RBP12.72□□□□□ -0.37
UBE3D-206ENST00000505226 TMEM150BA6NC51 233 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 TTC4O95801 387 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 GZMAP12544 262 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 ITGA8P53708 1063 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 RWDD2BP57060 319 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 MAP2K1Q02750 393 aaPredicted RBP12.72□□□□□ -0.37
UBE3D-206ENST00000505226 CALCOCO2Q13137 446 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 PHLDB2Q86SQ0 1253 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 CROCCP2Q86T23 111 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 FMNL3Q8IVF7 1028 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 PPM1KQ8N3J5 372 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 KCTD17Q8N5Z5 321 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 DHX38Q92620 1227 aaKnown RBP12.72□□□□□ -0.37
UBE3D-206ENST00000505226 ZNF653Q96CK0 615 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 FAM84AQ96KN4 292 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 RUNDC3BQ96NL0 473 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 C8orf37Q96NL8 207 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 ZNF577Q9BSK1 485 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 DBNDD1Q9H9R9 158 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 WHRNQ9P202 907 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 O00370 1275 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 SKAP2O75563 359 aaPredicted RBP12.72□□□□□ -0.37
UBE3D-206ENST00000505226 FOXN2P32314 431 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 CRYMQ14894 314 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 CEP55Q53EZ4 464 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 SGO2Q562F6 1265 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 CCDC174Q6PII3 467 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 PADI6Q6TGC4 694 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 SPATA21Q7Z572 469 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 ERICH1Q86X53 443 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 C7orf43Q8WVR3 580 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 DDX1Q92499 740 aaKnown RBP12.72□□□□□ -0.37
UBE3D-206ENST00000505226 HSPBP1Q9NZL4 362 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 PKD2L1Q9P0L9 805 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms