RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 PCDHB12Q9Y5F1 795 aa18.51■□□□□ 0.55
SYNE4-207ENST00000505054 K7ENM7 598 aa18.5■□□□□ 0.55
SYNE4-207ENST00000505054 EOMESO95936 686 aa18.5■□□□□ 0.55
SYNE4-207ENST00000505054 SKIP12755 728 aa18.5■□□□□ 0.55
SYNE4-207ENST00000505054 IDEP14735 1019 aa18.5■□□□□ 0.55
SYNE4-207ENST00000505054 GAP43P17677 238 aa18.5■□□□□ 0.55
SYNE4-207ENST00000505054 NMT1P30419 496 aaKnown RBP18.5■□□□□ 0.55
SYNE4-207ENST00000505054 AFMP43652 599 aa18.5■□□□□ 0.55
SYNE4-207ENST00000505054 AMPD3Q01432 767 aa18.5■□□□□ 0.55
SYNE4-207ENST00000505054 CLLU1OSQ5K130 101 aa18.5■□□□□ 0.55
SYNE4-207ENST00000505054 SLC27A1Q6PCB7 646 aa18.5■□□□□ 0.55
SYNE4-207ENST00000505054 TRIM67Q6ZTA4 783 aa18.5■□□□□ 0.55
SYNE4-207ENST00000505054 MRPL10Q7Z7H8 261 aaKnown RBP18.5■□□□□ 0.55
SYNE4-207ENST00000505054 RBM23Q86U06 439 aaKnown RBP18.5■□□□□ 0.55
SYNE4-207ENST00000505054 CEP57L1Q8IYX8 460 aa18.5■□□□□ 0.55
SYNE4-207ENST00000505054 TMEM87AQ8NBN3 555 aa18.5■□□□□ 0.55
SYNE4-207ENST00000505054 SMG8Q8ND04 991 aaKnown RBP18.5■□□□□ 0.55
SYNE4-207ENST00000505054 PAGE5Q96GU1 130 aa18.5■□□□□ 0.55
SYNE4-207ENST00000505054 CDCA3Q99618 268 aaPredicted RBP18.5■□□□□ 0.55
SYNE4-207ENST00000505054 C7orf25Q9BPX7 421 aa18.5■□□□□ 0.55
SYNE4-207ENST00000505054 BLZF1Q9H2G9 400 aa18.5■□□□□ 0.55
SYNE4-207ENST00000505054 TLR9Q9NR96 1032 aa18.5■□□□□ 0.55
SYNE4-207ENST00000505054 USP25Q9UHP3 1055 aa18.5■□□□□ 0.55
SYNE4-207ENST00000505054 IPPQ9Y573 584 aa18.5■□□□□ 0.55
SYNE4-207ENST00000505054 PCDHGC5Q9Y5F6 944 aa18.5■□□□□ 0.55
SYNE4-207ENST00000505054 TMEM221A6NGB7 291 aa18.49■□□□□ 0.55
SYNE4-207ENST00000505054 H0YCG3 227 aa18.49■□□□□ 0.55
SYNE4-207ENST00000505054 M0R296 226 aa18.49■□□□□ 0.55
SYNE4-207ENST00000505054 N4BP3O15049 544 aa18.49■□□□□ 0.55
SYNE4-207ENST00000505054 NPTXRO95502 500 aa18.49■□□□□ 0.55
SYNE4-207ENST00000505054 ASIC1P78348 528 aa18.49■□□□□ 0.55
SYNE4-207ENST00000505054 CUL4BQ13620 913 aa18.49■□□□□ 0.55
SYNE4-207ENST00000505054 TMEM132AQ24JP5 1023 aa18.49■□□□□ 0.55
SYNE4-207ENST00000505054 SPOUT1Q5T280 376 aaKnown RBP18.49■□□□□ 0.55
SYNE4-207ENST00000505054 ATF7IP2Q5U623 682 aa18.49■□□□□ 0.55
SYNE4-207ENST00000505054 AGMOQ6ZNB7 445 aa18.49■□□□□ 0.55
SYNE4-207ENST00000505054 ACO2Q99798 780 aaKnown RBP18.49■□□□□ 0.55
SYNE4-207ENST00000505054 TARS2Q9BW92 718 aaKnown RBP18.49■□□□□ 0.55
SYNE4-207ENST00000505054 PHF7Q9BWX1 381 aaPredicted RBP18.49■□□□□ 0.55
SYNE4-207ENST00000505054 MRPL4Q9BYD3 311 aaKnown RBP18.49■□□□□ 0.55
SYNE4-207ENST00000505054 FGFBP2Q9BYJ0 223 aa18.49■□□□□ 0.55
SYNE4-207ENST00000505054 NXF3Q9H4D5 531 aaKnown RBP18.49■□□□□ 0.55
SYNE4-207ENST00000505054 ST6GALNAC4Q9H4F1 302 aa18.49■□□□□ 0.55
SYNE4-207ENST00000505054 TLE6Q9H808 572 aa18.49■□□□□ 0.55
SYNE4-207ENST00000505054 PANK4Q9NVE7 773 aa18.49■□□□□ 0.55
SYNE4-207ENST00000505054 SEL1LQ9UBV2 794 aa18.49■□□□□ 0.55
SYNE4-207ENST00000505054 HES2Q9Y543 173 aa18.49■□□□□ 0.55
SYNE4-207ENST00000505054 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.48■□□□□ 0.55
SYNE4-207ENST00000505054 GOLGA6L4A6NEF3 574 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 TBKBP1A7MCY6 615 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 ABLIM1O14639 778 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 HOXA2O43364 376 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 GADD45BO75293 160 aaPredicted RBP18.48■□□□□ 0.55
SYNE4-207ENST00000505054 PPP1R37O75864 691 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 PTPN5P54829 565 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 ZXDAP98168 799 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 GTF2BQ00403 316 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 ZC2HC1CQ53FD0 456 aaPredicted RBP18.48■□□□□ 0.55
SYNE4-207ENST00000505054 FMR1NBQ8N0W7 255 aaPredicted RBP18.48■□□□□ 0.55
SYNE4-207ENST00000505054 PRSS33Q8NF86 280 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 HELQQ8TDG4 1101 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 PBXIP1Q96AQ6 731 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 CASD1Q96PB1 797 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 PRRX2Q99811 253 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 STRA6Q9BX79 667 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 TMEM117Q9H0C3 514 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 RNF39Q9H2S5 420 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 PTPRHQ9HD43 1115 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 OLFML3Q9NRN5 406 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 TBC1D7Q9P0N9 293 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 HCSTQ9UBK5 93 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 TBX20Q9UMR3 447 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 TNFSF13BQ9Y275 285 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 MYH11P35749 1972 aa18.48■□□□□ 0.55
SYNE4-207ENST00000505054 FGF18O76093 207 aa18.47■□□□□ 0.55
SYNE4-207ENST00000505054 ZNF202O95125 648 aa18.47■□□□□ 0.55
SYNE4-207ENST00000505054 SCP2P22307 547 aa18.47■□□□□ 0.55
SYNE4-207ENST00000505054 PROZP22891 400 aa18.47■□□□□ 0.55
SYNE4-207ENST00000505054 CASP5P51878 434 aa18.47■□□□□ 0.55
SYNE4-207ENST00000505054 STRN3Q13033 797 aa18.47■□□□□ 0.55
SYNE4-207ENST00000505054 SNW1Q13573 536 aaKnown RBP18.47■□□□□ 0.55
SYNE4-207ENST00000505054 DUSP6Q16828 381 aa18.47■□□□□ 0.55
SYNE4-207ENST00000505054 PDE12Q6L8Q7 609 aaKnown RBP18.47■□□□□ 0.55
SYNE4-207ENST00000505054 KRBA2Q6ZNG9 492 aa18.47■□□□□ 0.55
SYNE4-207ENST00000505054 ZNF720Q7Z2F6 126 aa18.47■□□□□ 0.55
SYNE4-207ENST00000505054 MAP4K3Q8IVH8 894 aa18.47■□□□□ 0.55
SYNE4-207ENST00000505054 SUGP1Q8IWZ8 645 aaKnown RBP18.47■□□□□ 0.55
SYNE4-207ENST00000505054 CCDC65Q8IXS2 484 aa18.47■□□□□ 0.55
SYNE4-207ENST00000505054 THNSL1Q8IYQ7 743 aa18.47■□□□□ 0.55
SYNE4-207ENST00000505054 COLGALT1Q8NBJ5 622 aa18.47■□□□□ 0.55
SYNE4-207ENST00000505054 CNNM3Q8NE01 707 aa18.47■□□□□ 0.55
SYNE4-207ENST00000505054 ENGASEQ8NFI3 743 aa18.47■□□□□ 0.55
SYNE4-207ENST00000505054 MICAL1Q8TDZ2 1067 aa18.47■□□□□ 0.55
SYNE4-207ENST00000505054 HPS3Q969F9 1004 aa18.47■□□□□ 0.55
SYNE4-207ENST00000505054 PGBD4Q96DM1 585 aa18.47■□□□□ 0.55
SYNE4-207ENST00000505054 TRIM6Q9C030 488 aaPredicted RBP18.47■□□□□ 0.55
SYNE4-207ENST00000505054 ZDBF2Q9HCK1 2354 aa18.46■□□□□ 0.55
SYNE4-207ENST00000505054 FSCN2O14926 492 aa18.46■□□□□ 0.55
SYNE4-207ENST00000505054 SRGAP2BP0DMP2 458 aa18.46■□□□□ 0.55
SYNE4-207ENST00000505054 LAG3P18627 525 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms