RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 KIAA0391O15091 583 aaKnown RBP7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 PMM2O15305 246 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 ZEB2O60315 1214 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 HARSP12081 509 aaKnown RBP7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 KRT13P13646 458 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 DARSP14868 501 aaKnown RBP7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 TRIM21P19474 475 aaKnown RBP7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 HOXA11P31270 313 aaPredicted RBP7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 HNRNPH3P31942 346 aaKnown RBP7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 ACLYP53396 1101 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 ZBED6P86452 979 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 MYL7Q01449 175 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 ENPEPQ07075 957 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 MGAT3Q09327 533 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 NOLC1Q14978 699 aaKnown RBP eCLIP7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 MEA1Q16626 185 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 ZNF568Q3ZCX4 644 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 KLHDC7AQ5VTJ3 777 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 LMBRD2Q68DH5 695 aaPredicted RBP7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 SLFN12LQ6IEE8 588 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 PDXDC1Q6P996 788 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 MPZL3Q6UWV2 235 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 GBP6Q6ZN66 633 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 SRGAP1Q7Z6B7 1085 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 SERINC5Q86VE9 423 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 GPIHBP1Q8IV16 184 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 CNGA4Q8IV77 575 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 BRSK2Q8IWQ3 736 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 TMEM130Q8N3G9 435 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 C7orf31Q8N865 590 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 OLIG1Q8TAK6 271 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 NLRP7Q8WX94 980 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 DHX38Q92620 1227 aaKnown RBP7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 ELMO3Q96BJ8 720 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 CHP1Q99653 195 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 BAG1Q99933 345 aaPredicted RBP7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 NUP58Q9BVL2 599 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 GPR88Q9GZN0 384 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 INTS2Q9H0H0 1204 aaKnown RBP7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 MMRN2Q9H8L6 949 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 SPC25Q9HBM1 224 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 PDE11AQ9HCR9 933 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 GCNT4Q9P109 453 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 FHOD1Q9Y613 1164 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 DNAH12Q6ZR08 3092 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 CEP350Q5VT06 3117 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 A0A0U1RQJ8 604 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 A0A1B0GUA9 196 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 A0A1W2PQ45 241 aaPredicted RBP7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 A0A1W2PQY0 241 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 ZNF233A6NK53 670 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 OGTO15294 1046 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 CLDN3O15551 220 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 ZNF500O60304 480 aaPredicted RBP7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 VNN1O95497 513 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 PLEKP08567 350 aaPredicted RBP7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 PNMA6AP0CW24 399 aaPredicted RBP7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 UCHL3P15374 230 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 KCNJ6P48051 423 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 MXI1P50539 228 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 JAM2P57087 298 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 POLR2FP61218 127 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 SNX17Q15036 470 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 MTFR1Q15390 333 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 ENOX2Q16206 610 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 EXOC3L4Q17RC7 722 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 TRIM71Q2Q1W2 868 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 TDRD10Q5VZ19 366 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 HGSNATQ68CP4 663 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 IQCEQ6IPM2 695 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 PHLDB3Q6NSJ2 640 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 TOGARAM2Q6ZUX3 1019 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 SV2AQ7L0J3 742 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 ARHGEF19Q8IW93 802 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 EFCAB13Q8IY85 973 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 SLC43A3Q8NBI5 491 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 PCSK9Q8NBP7 692 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 CCDC112Q8NEF3 446 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 NEK11Q8NG66 645 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 OR5B17Q8NGF7 314 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 OR8K1Q8NGG5 319 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 TAS1R2Q8TE23 839 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 ATRIPQ8WXE1 791 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 CCDC51Q96ER9 411 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 PRIMPOLQ96LW4 560 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 PCMTD1Q96MG8 357 aaPredicted RBP7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 CGRRF1Q99675 332 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 SENP6Q9GZR1 1112 aaPredicted RBP7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 CXCL16Q9H2A7 254 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 KIAA1586Q9HCI6 787 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 TMEM8AQ9HCN3 771 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 HMX1Q9NP08 348 aaPredicted RBP7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 NLRC4Q9NPP4 1024 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 PAK6Q9NQU5 681 aaPredicted RBP7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 KCND1Q9NSA2 647 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 TRMT13Q9NUP7 481 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 SPTLC3Q9NUV7 552 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 RBAKQ9NYW8 714 aaPredicted RBP7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 CEP72Q9P209 647 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms