RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 PTPN21Q16825 1174 aa21.41■■□□□ 1.02
UBE2D3-215ENST00000503418 DCAF4L1Q3SXM0 396 aa21.41■■□□□ 1.02
UBE2D3-215ENST00000503418 ATF7IP2Q5U623 682 aa21.41■■□□□ 1.02
UBE2D3-215ENST00000503418 KIAA0319Q5VV43 1072 aa21.41■■□□□ 1.02
UBE2D3-215ENST00000503418 KCNK18Q7Z418 384 aa21.41■■□□□ 1.02
UBE2D3-215ENST00000503418 RUSC1Q9BVN2 902 aa21.41■■□□□ 1.02
UBE2D3-215ENST00000503418 GPR62Q9BZJ7 368 aa21.41■■□□□ 1.02
UBE2D3-215ENST00000503418 MAN1C1Q9NR34 630 aa21.41■■□□□ 1.02
UBE2D3-215ENST00000503418 MYH11P35749 1972 aa21.4■■□□□ 1.02
UBE2D3-215ENST00000503418 VWA3AA6NCI4 1184 aa21.4■■□□□ 1.02
UBE2D3-215ENST00000503418 PTGESO14684 152 aa21.4■■□□□ 1.02
UBE2D3-215ENST00000503418 TADA2AO75478 443 aa21.4■■□□□ 1.02
UBE2D3-215ENST00000503418 EFEMP2O95967 443 aa21.4■■□□□ 1.02
UBE2D3-215ENST00000503418 THP07101 528 aa21.4■■□□□ 1.02
UBE2D3-215ENST00000503418 MYBP10242 640 aa21.4■■□□□ 1.02
UBE2D3-215ENST00000503418 NPTX2P47972 431 aa21.4■■□□□ 1.02
UBE2D3-215ENST00000503418 DMP1Q13316 513 aaPredicted RBP21.4■■□□□ 1.02
UBE2D3-215ENST00000503418 NT5DC1Q5TFE4 455 aa21.4■■□□□ 1.02
UBE2D3-215ENST00000503418 RINT1Q6NUQ1 792 aa21.4■■□□□ 1.02
UBE2D3-215ENST00000503418 TDRD5Q8NAT2 981 aaKnown RBP21.4■■□□□ 1.02
UBE2D3-215ENST00000503418 HASPINQ8TF76 798 aa21.4■■□□□ 1.02
UBE2D3-215ENST00000503418 DRC1Q96MC2 740 aa21.4■■□□□ 1.02
UBE2D3-215ENST00000503418 MFSD14AQ96MC6 490 aa21.4■■□□□ 1.02
UBE2D3-215ENST00000503418 PAAF1Q9BRP4 392 aa21.4■■□□□ 1.02
UBE2D3-215ENST00000503418 CXCL16Q9H2A7 254 aa21.4■■□□□ 1.02
UBE2D3-215ENST00000503418 DENND4AQ7Z401 1863 aa21.4■■□□□ 1.02
UBE2D3-215ENST00000503418 MYO10Q9HD67 2058 aa21.4■■□□□ 1.02
UBE2D3-215ENST00000503418 TRIP11Q15643 1979 aa21.39■■□□□ 1.02
UBE2D3-215ENST00000503418 SF3B1O75533 1304 aaKnown RBP eCLIP21.39■■□□□ 1.012e-6■■■■■ 50.5
UBE2D3-215ENST00000503418 PHLPP2Q6ZVD8 1323 aa21.39■■□□□ 1.01
UBE2D3-215ENST00000503418 GLUD1P00367 558 aa21.39■■□□□ 1.01
UBE2D3-215ENST00000503418 USP41Q3LFD5 358 aa21.39■■□□□ 1.01
UBE2D3-215ENST00000503418 LARP1BQ659C4 914 aaKnown RBP21.39■■□□□ 1.01
UBE2D3-215ENST00000503418 APBB1IPQ7Z5R6 666 aaPredicted RBP21.39■■□□□ 1.01
UBE2D3-215ENST00000503418 GPR149Q86SP6 731 aa21.39■■□□□ 1.01
UBE2D3-215ENST00000503418 GLYCTKQ8IVS8 523 aa21.39■■□□□ 1.01
UBE2D3-215ENST00000503418 DAW1Q8N136 415 aa21.39■■□□□ 1.01
UBE2D3-215ENST00000503418 RIN2Q8WYP3 895 aaPredicted RBP21.39■■□□□ 1.01
UBE2D3-215ENST00000503418 PBXIP1Q96AQ6 731 aa21.39■■□□□ 1.01
UBE2D3-215ENST00000503418 PLIN2Q99541 437 aa21.39■■□□□ 1.01
UBE2D3-215ENST00000503418 KMT5AQ9NQR1 393 aa21.39■■□□□ 1.01
UBE2D3-215ENST00000503418 CHST7Q9NS84 486 aa21.39■■□□□ 1.01
UBE2D3-215ENST00000503418 KIF4AO95239 1232 aa21.38■■□□□ 1.01
UBE2D3-215ENST00000503418 SIGLEC14Q08ET2 396 aa21.38■■□□□ 1.01
UBE2D3-215ENST00000503418 RAD51AP2Q09MP3 1159 aa21.38■■□□□ 1.01
UBE2D3-215ENST00000503418 ELMSAN1Q6PJG2 1045 aa21.38■■□□□ 1.01
UBE2D3-215ENST00000503418 C1orf186Q6ZWK4 172 aa21.38■■□□□ 1.01
UBE2D3-215ENST00000503418 CDK5RAP3Q96JB5 506 aa21.38■■□□□ 1.01
UBE2D3-215ENST00000503418 RXFP1Q9HBX9 757 aa21.38■■□□□ 1.01
UBE2D3-215ENST00000503418 GLRA4Q5JXX5 417 aa21.37■■□□□ 1.01
UBE2D3-215ENST00000503418 CCDC149Q6ZUS6 474 aa21.37■■□□□ 1.01
UBE2D3-215ENST00000503418 PALB2Q86YC2 1186 aa21.37■■□□□ 1.01
UBE2D3-215ENST00000503418 KREMEN2Q8NCW0 462 aa21.37■■□□□ 1.01
UBE2D3-215ENST00000503418 PNMA5Q96PV4 448 aa21.37■■□□□ 1.01
UBE2D3-215ENST00000503418 NT5C3AQ9H0P0 336 aa21.37■■□□□ 1.01
UBE2D3-215ENST00000503418 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.37■■□□□ 1.01
UBE2D3-215ENST00000503418 DPP7Q9UHL4 492 aa21.37■■□□□ 1.01
UBE2D3-215ENST00000503418 TNFSF13BQ9Y275 285 aa21.37■■□□□ 1.01
UBE2D3-215ENST00000503418 MTCL1Q9Y4B5 1905 aaKnown RBP21.37■■□□□ 1.01
UBE2D3-215ENST00000503418 SFI1A8K8P3 1242 aa21.36■■□□□ 1.01
UBE2D3-215ENST00000503418 SPATA31D3P0C874 917 aa21.36■■□□□ 1.01
UBE2D3-215ENST00000503418 RPL17P18621 184 aaKnown RBP21.36■■□□□ 1.01
UBE2D3-215ENST00000503418 MAPK7Q13164 816 aa21.36■■□□□ 1.01
UBE2D3-215ENST00000503418 ZNF568Q3ZCX4 644 aa21.36■■□□□ 1.01
UBE2D3-215ENST00000503418 HYIQ5T013 277 aa21.36■■□□□ 1.01
UBE2D3-215ENST00000503418 ARL6IP4Q66PJ3 421 aaKnown RBP21.36■■□□□ 1.01
UBE2D3-215ENST00000503418 C15orf39Q6ZRI6 1047 aa21.36■■□□□ 1.01
UBE2D3-215ENST00000503418 SPATA31D4Q6ZUB0 917 aa21.36■■□□□ 1.01
UBE2D3-215ENST00000503418 BMP8AQ7Z5Y6 402 aa21.36■■□□□ 1.01
UBE2D3-215ENST00000503418 CEP57Q86XR8 500 aa21.36■■□□□ 1.01
UBE2D3-215ENST00000503418 ACO2Q99798 780 aaKnown RBP21.36■■□□□ 1.01
UBE2D3-215ENST00000503418 TIPINQ9BVW5 301 aa21.36■■□□□ 1.01
UBE2D3-215ENST00000503418 MRPL4Q9BYD3 311 aaKnown RBP21.36■■□□□ 1.01
UBE2D3-215ENST00000503418 TMEM134Q9H6X4 195 aa21.36■■□□□ 1.01
UBE2D3-215ENST00000503418 ARHGAP28Q9P2N2 729 aa21.36■■□□□ 1.01
UBE2D3-215ENST00000503418 SORCS3Q9UPU3 1222 aa21.36■■□□□ 1.01
UBE2D3-215ENST00000503418 USTQ9Y2C2 406 aa21.36■■□□□ 1.01
UBE2D3-215ENST00000503418 ZNF318Q5VUA4 2279 aa21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 CCDC195A0A1B0GUA6 201 aa21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 SLC16A4O15374 487 aa21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 ASGR2P07307 311 aa21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 GUCY2CP25092 1073 aa21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 CREMQ03060 361 aa21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 MTMR3Q13615 1198 aa21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 NAB2Q15742 525 aa21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 RTP2Q5QGT7 225 aa21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 FAM171A1Q5VUB5 890 aa21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 PRSS55Q6UWB4 352 aaPredicted RBP21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 TAS1R3Q7RTX0 852 aa21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 SUGP1Q8IWZ8 645 aaKnown RBP21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 PLCD3Q8N3E9 789 aa21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 CEP120Q8N960 986 aa21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 ACSF2Q96CM8 615 aaPredicted RBP21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 TARS2Q9BW92 718 aaKnown RBP21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 CDT1Q9H211 546 aa21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 C17orf75Q9HAS0 396 aa21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 FNIP2Q9P278 1114 aa21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 LIMD1Q9UGP4 676 aa21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 RBM19Q9Y4C8 960 aaKnown RBP21.35■■□□□ 1.01
UBE2D3-215ENST00000503418 TGM5O43548 720 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms