RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 DNAJB4Q9UDY4 337 aa19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 GDAQ9Y2T3 454 aa19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 NLRC5Q86WI3 1866 aa19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 MYO9BQ13459 2157 aa19.95■□□□□ 0.78
PDLIM7-209ENST00000503346 HNRNPDLO14979 420 aaKnown RBP19.95■□□□□ 0.78
PDLIM7-209ENST00000503346 SLC11A1P49279 550 aa19.95■□□□□ 0.78
PDLIM7-209ENST00000503346 KRT17Q04695 432 aa19.95■□□□□ 0.78
PDLIM7-209ENST00000503346 ALCAMQ13740 583 aa19.95■□□□□ 0.78
PDLIM7-209ENST00000503346 CCDC85BQ15834 202 aaPredicted RBP19.95■□□□□ 0.78
PDLIM7-209ENST00000503346 COLGALT2Q8IYK4 626 aa19.95■□□□□ 0.78
PDLIM7-209ENST00000503346 PPM1EQ8WY54 764 aa19.95■□□□□ 0.78
PDLIM7-209ENST00000503346 HAPLN2Q9GZV7 340 aa19.95■□□□□ 0.78
PDLIM7-209ENST00000503346 CHMP5Q9NZZ3 219 aa19.95■□□□□ 0.78
PDLIM7-209ENST00000503346 TBC1D7Q9P0N9 293 aa19.95■□□□□ 0.78
PDLIM7-209ENST00000503346 PUF60Q9UHX1 559 aaKnown RBP19.95■□□□□ 0.78
PDLIM7-209ENST00000503346 PCDHB13Q9Y5F0 798 aa19.95■□□□□ 0.78
PDLIM7-209ENST00000503346 KIAA1671Q9BY89 1806 aa19.95■□□□□ 0.78
PDLIM7-209ENST00000503346 NT5C1B-RDH14C9J2C7 533 aa19.94■□□□□ 0.78
PDLIM7-209ENST00000503346 PTGESO14684 152 aa19.94■□□□□ 0.78
PDLIM7-209ENST00000503346 GCNT3O95395 438 aa19.94■□□□□ 0.78
PDLIM7-209ENST00000503346 ALDH2P05091 517 aa19.94■□□□□ 0.78
PDLIM7-209ENST00000503346 AFMP43652 599 aa19.94■□□□□ 0.78
PDLIM7-209ENST00000503346 L1TD1Q5T7N2 865 aaKnown RBP19.94■□□□□ 0.78
PDLIM7-209ENST00000503346 SLC39A4Q6P5W5 647 aa19.94■□□□□ 0.78
PDLIM7-209ENST00000503346 UNC13DQ70J99 1090 aa19.94■□□□□ 0.78
PDLIM7-209ENST00000503346 TMEM173Q86WV6 379 aaPredicted RBP19.94■□□□□ 0.78
PDLIM7-209ENST00000503346 PAGE5Q96GU1 130 aa19.94■□□□□ 0.78
PDLIM7-209ENST00000503346 IGSF21Q96ID5 467 aa19.94■□□□□ 0.78
PDLIM7-209ENST00000503346 GOLPH3LQ9H4A5 285 aa19.94■□□□□ 0.78
PDLIM7-209ENST00000503346 NSUN3Q9H649 340 aaKnown RBP19.94■□□□□ 0.78
PDLIM7-209ENST00000503346 TLR9Q9NR96 1032 aa19.94■□□□□ 0.78
PDLIM7-209ENST00000503346 TOPORSQ9NS56 1045 aaPredicted RBP19.94■□□□□ 0.78
PDLIM7-209ENST00000503346 PVALEFA0A1B0GWK0 134 aa19.93■□□□□ 0.78
PDLIM7-209ENST00000503346 MYBP10242 640 aa19.93■□□□□ 0.78
PDLIM7-209ENST00000503346 HARSP12081 509 aaKnown RBP19.93■□□□□ 0.78
PDLIM7-209ENST00000503346 CASP5P51878 434 aa19.93■□□□□ 0.78
PDLIM7-209ENST00000503346 YARSP54577 528 aaKnown RBP19.93■□□□□ 0.78
PDLIM7-209ENST00000503346 EHHADHQ08426 723 aa19.93■□□□□ 0.78
PDLIM7-209ENST00000503346 CUL4BQ13620 913 aa19.93■□□□□ 0.78
PDLIM7-209ENST00000503346 XKR4Q5GH76 650 aa19.93■□□□□ 0.78
PDLIM7-209ENST00000503346 ALKAL1Q6UXT8 129 aa19.93■□□□□ 0.78
PDLIM7-209ENST00000503346 TMEM169Q96HH4 297 aa19.93■□□□□ 0.78
PDLIM7-209ENST00000503346 ACAP3Q96P50 834 aa19.93■□□□□ 0.78
PDLIM7-209ENST00000503346 FGFBP2Q9BYJ0 223 aa19.93■□□□□ 0.78
PDLIM7-209ENST00000503346 CXCL16Q9H2A7 254 aa19.93■□□□□ 0.78
PDLIM7-209ENST00000503346 BLZF1Q9H2G9 400 aa19.93■□□□□ 0.78
PDLIM7-209ENST00000503346 FAN1Q9Y2M0 1017 aa19.93■□□□□ 0.78
PDLIM7-209ENST00000503346 STYXL1Q9Y6J8 313 aa19.93■□□□□ 0.78
PDLIM7-209ENST00000503346 MYH11P35749 1972 aa19.92■□□□□ 0.78
PDLIM7-209ENST00000503346 EYSQ5T1H1 3165 aa19.92■□□□□ 0.78
PDLIM7-209ENST00000503346 A0A0B4J269 797 aa19.92■□□□□ 0.78
PDLIM7-209ENST00000503346 NRP1O14786 923 aa19.92■□□□□ 0.78
PDLIM7-209ENST00000503346 FSCN2O14926 492 aa19.92■□□□□ 0.78
PDLIM7-209ENST00000503346 MYL1P05976 194 aa19.92■□□□□ 0.78
PDLIM7-209ENST00000503346 THP07101 528 aa19.92■□□□□ 0.78
PDLIM7-209ENST00000503346 CASP1P29466 404 aa19.92■□□□□ 0.78
PDLIM7-209ENST00000503346 IRS1P35568 1242 aa19.92■□□□□ 0.78
PDLIM7-209ENST00000503346 OSTNP61366 133 aa19.92■□□□□ 0.78
PDLIM7-209ENST00000503346 KYAT1Q16773 422 aa19.92■□□□□ 0.78
PDLIM7-209ENST00000503346 TCEAL5Q5H9L2 206 aa19.92■□□□□ 0.78
PDLIM7-209ENST00000503346 PDE12Q6L8Q7 609 aaKnown RBP19.92■□□□□ 0.78
PDLIM7-209ENST00000503346 GRAMD1CQ8IYS0 662 aa19.92■□□□□ 0.78
PDLIM7-209ENST00000503346 BCL7CQ8WUZ0 217 aaPredicted RBP19.92■□□□□ 0.78
PDLIM7-209ENST00000503346 SNX27Q96L92 541 aa19.92■□□□□ 0.78
PDLIM7-209ENST00000503346 ACCSQ96QU6 501 aa19.92■□□□□ 0.78
PDLIM7-209ENST00000503346 EXOC7Q9UPT5 735 aa19.92■□□□□ 0.78
PDLIM7-209ENST00000503346 PRRC2BQ5JSZ5 2229 aaKnown RBP19.92■□□□□ 0.78
PDLIM7-209ENST00000503346 ANKRD63C9JTQ0 380 aa19.91■□□□□ 0.78
PDLIM7-209ENST00000503346 FAM189A1O60320 539 aa19.91■□□□□ 0.78
PDLIM7-209ENST00000503346 NR1I2O75469 434 aa19.91■□□□□ 0.78
PDLIM7-209ENST00000503346 MATR3P43243 847 aaKnown RBP eCLIP19.91■□□□□ 0.78
PDLIM7-209ENST00000503346 OR1G1P47890 313 aa19.91■□□□□ 0.78
PDLIM7-209ENST00000503346 ERVFC1P60507 584 aa19.91■□□□□ 0.78
PDLIM7-209ENST00000503346 KCNA1Q09470 495 aa19.91■□□□□ 0.78
PDLIM7-209ENST00000503346 TUSC3Q13454 348 aa19.91■□□□□ 0.78
PDLIM7-209ENST00000503346 NAB2Q15742 525 aa19.91■□□□□ 0.78
PDLIM7-209ENST00000503346 FAM26FQ5R3K3 315 aa19.91■□□□□ 0.78
PDLIM7-209ENST00000503346 SLFN12LQ6IEE8 588 aa19.91■□□□□ 0.78
PDLIM7-209ENST00000503346 STXBP4Q6ZWJ1 553 aa19.91■□□□□ 0.78
PDLIM7-209ENST00000503346 DDX53Q86TM3 631 aaKnown RBP19.91■□□□□ 0.78
PDLIM7-209ENST00000503346 HPS3Q969F9 1004 aa19.91■□□□□ 0.78
PDLIM7-209ENST00000503346 PPP1R10Q96QC0 940 aaKnown RBP19.91■□□□□ 0.78
PDLIM7-209ENST00000503346 TMEM206Q9H813 350 aa19.91■□□□□ 0.78
PDLIM7-209ENST00000503346 MARCH5Q9NX47 278 aa19.91■□□□□ 0.78
PDLIM7-209ENST00000503346 STK39Q9UEW8 545 aa19.91■□□□□ 0.78
PDLIM7-209ENST00000503346 SMIM28A0A1B0GU29 152 aa19.9■□□□□ 0.78
PDLIM7-209ENST00000503346 GOLGA6L4A6NEF3 574 aa19.9■□□□□ 0.78
PDLIM7-209ENST00000503346 OGTO15294 1046 aa19.9■□□□□ 0.78
PDLIM7-209ENST00000503346 MEFVO15553 781 aaPredicted RBP19.9■□□□□ 0.78
PDLIM7-209ENST00000503346 ZNF202O95125 648 aa19.9■□□□□ 0.78
PDLIM7-209ENST00000503346 CSPG5O95196 566 aa19.9■□□□□ 0.78
PDLIM7-209ENST00000503346 CLTAP09496 248 aa19.9■□□□□ 0.78
PDLIM7-209ENST00000503346 KCNE1P15382 129 aa19.9■□□□□ 0.78
PDLIM7-209ENST00000503346 TPRNQ4KMQ1 711 aa19.9■□□□□ 0.78
PDLIM7-209ENST00000503346 SEZ6Q53EL9 994 aa19.9■□□□□ 0.78
PDLIM7-209ENST00000503346 KRBA2Q6ZNG9 492 aa19.9■□□□□ 0.78
PDLIM7-209ENST00000503346 GLIS3Q8NEA6 775 aa19.9■□□□□ 0.78
PDLIM7-209ENST00000503346 TCF25Q9BQ70 676 aa19.9■□□□□ 0.78
PDLIM7-209ENST00000503346 MSTO1Q9BUK6 570 aa19.9■□□□□ 0.78
PDLIM7-209ENST00000503346 NGRNQ9NPE2 291 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms