RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 STK4Q13043 487 aa27.46■■□□□ 1.99
LSM6-202ENST00000502781 KCNB1Q14721 858 aa27.46■■□□□ 1.99
LSM6-202ENST00000502781 BMT2Q1RMZ1 405 aa27.46■■□□□ 1.99
LSM6-202ENST00000502781 SLFN12LQ6IEE8 588 aa27.46■■□□□ 1.99
LSM6-202ENST00000502781 SPATA20Q8TB22 786 aa27.46■■□□□ 1.99
LSM6-202ENST00000502781 URGCPQ8TCY9 931 aa27.46■■□□□ 1.99
LSM6-202ENST00000502781 SCFD1Q8WVM8 642 aa27.46■■□□□ 1.99
LSM6-202ENST00000502781 PRDM12Q9H4Q4 367 aa27.46■■□□□ 1.99
LSM6-202ENST00000502781 SLC39A2Q9NP94 309 aa27.46■■□□□ 1.99
LSM6-202ENST00000502781 GDAQ9Y2T3 454 aa27.46■■□□□ 1.99
LSM6-202ENST00000502781 KINO60870 393 aaKnown RBP27.45■■□□□ 1.98
LSM6-202ENST00000502781 LAG3P18627 525 aa27.45■■□□□ 1.98
LSM6-202ENST00000502781 PNOCQ13519 176 aa27.45■■□□□ 1.98
LSM6-202ENST00000502781 ALKAL1Q6UXT8 129 aa27.45■■□□□ 1.98
LSM6-202ENST00000502781 THNSL1Q8IYQ7 743 aa27.45■■□□□ 1.98
LSM6-202ENST00000502781 KIAA0895Q8NCT3 520 aa27.45■■□□□ 1.98
LSM6-202ENST00000502781 FBXO22Q8NEZ5 403 aa27.45■■□□□ 1.98
LSM6-202ENST00000502781 P2RX5Q93086 422 aa27.45■■□□□ 1.98
LSM6-202ENST00000502781 CDX2Q99626 313 aaPredicted RBP27.45■■□□□ 1.98
LSM6-202ENST00000502781 CCDC94Q9BW85 323 aaPredicted RBP27.45■■□□□ 1.98
LSM6-202ENST00000502781 LMBRD1Q9NUN5 540 aa27.45■■□□□ 1.98
LSM6-202ENST00000502781 KLK14Q9P0G3 267 aa27.45■■□□□ 1.98
LSM6-202ENST00000502781 UBE4BO95155 1302 aa27.45■■□□□ 1.98
LSM6-202ENST00000502781 B4GALT3O60512 393 aa27.44■■□□□ 1.98
LSM6-202ENST00000502781 LPXNO60711 386 aa27.44■■□□□ 1.98
LSM6-202ENST00000502781 CTNNB1P35222 781 aa27.44■■□□□ 1.98
LSM6-202ENST00000502781 SCNN1GP51170 649 aa27.44■■□□□ 1.98
LSM6-202ENST00000502781 DSC1Q08554 894 aa27.44■■□□□ 1.98
LSM6-202ENST00000502781 XKR4Q5GH76 650 aa27.44■■□□□ 1.98
LSM6-202ENST00000502781 ZNF280BQ86YH2 543 aa27.44■■□□□ 1.98
LSM6-202ENST00000502781 COLGALT1Q8NBJ5 622 aa27.44■■□□□ 1.98
LSM6-202ENST00000502781 CXCL16Q9H2A7 254 aa27.44■■□□□ 1.98
LSM6-202ENST00000502781 NRDE2Q9H7Z3 1164 aa27.44■■□□□ 1.98
LSM6-202ENST00000502781 RALGAPA2Q2PPJ7 1873 aa27.44■■□□□ 1.98
LSM6-202ENST00000502781 H3BNC9 293 aa27.43■■□□□ 1.98
LSM6-202ENST00000502781 PTGESO14684 152 aa27.43■■□□□ 1.98
LSM6-202ENST00000502781 OGTO15294 1046 aa27.43■■□□□ 1.98
LSM6-202ENST00000502781 MEFVO15553 781 aaPredicted RBP27.43■■□□□ 1.98
LSM6-202ENST00000502781 DDHD2O94830 711 aa27.43■■□□□ 1.98
LSM6-202ENST00000502781 POMCP01189 267 aa27.43■■□□□ 1.98
LSM6-202ENST00000502781 HARSP12081 509 aaKnown RBP27.43■■□□□ 1.98
LSM6-202ENST00000502781 KYAT1Q16773 422 aa27.43■■□□□ 1.98
LSM6-202ENST00000502781 ACAP3Q96P50 834 aa27.43■■□□□ 1.98
LSM6-202ENST00000502781 AAASQ9NRG9 546 aa27.43■■□□□ 1.98
LSM6-202ENST00000502781 PLAGL2Q9UPG8 496 aa27.43■■□□□ 1.98
LSM6-202ENST00000502781 CLTAP09496 248 aa27.42■■□□□ 1.98
LSM6-202ENST00000502781 OSTNP61366 133 aa27.42■■□□□ 1.98
LSM6-202ENST00000502781 GRIK3Q13003 919 aa27.42■■□□□ 1.98
LSM6-202ENST00000502781 SEZ6Q53EL9 994 aa27.42■■□□□ 1.98
LSM6-202ENST00000502781 KCNT2Q6UVM3 1135 aa27.42■■□□□ 1.98
LSM6-202ENST00000502781 SYCP3Q8IZU3 236 aa27.42■■□□□ 1.98
LSM6-202ENST00000502781 C11orf84Q9BUA3 381 aaPredicted RBP27.42■■□□□ 1.98
LSM6-202ENST00000502781 MSTO1Q9BUK6 570 aa27.42■■□□□ 1.98
LSM6-202ENST00000502781 TOPORSQ9NS56 1045 aaPredicted RBP27.42■■□□□ 1.98
LSM6-202ENST00000502781 RFXAPO00287 272 aa27.41■■□□□ 1.98
LSM6-202ENST00000502781 GARTP22102 1010 aa27.41■■□□□ 1.98
LSM6-202ENST00000502781 MATR3P43243 847 aaKnown RBP eCLIP27.41■■□□□ 1.98
LSM6-202ENST00000502781 YARSP54577 528 aaKnown RBP27.41■■□□□ 1.98
LSM6-202ENST00000502781 RNASELQ05823 741 aaKnown RBP27.41■■□□□ 1.98
LSM6-202ENST00000502781 SPOUT1Q5T280 376 aaKnown RBP27.41■■□□□ 1.98
LSM6-202ENST00000502781 CCDC47Q96A33 483 aaKnown RBP27.41■■□□□ 1.98
LSM6-202ENST00000502781 SNX27Q96L92 541 aa27.41■■□□□ 1.98
LSM6-202ENST00000502781 ZNF558Q96NG5 402 aa27.41■■□□□ 1.98
LSM6-202ENST00000502781 GSDMAQ96QA5 445 aa27.41■■□□□ 1.98
LSM6-202ENST00000502781 GBP3Q9H0R5 595 aa27.41■■□□□ 1.98
LSM6-202ENST00000502781 DNAJB4Q9UDY4 337 aa27.41■■□□□ 1.98
LSM6-202ENST00000502781 HOOK1Q9UJC3 728 aaKnown RBP27.41■■□□□ 1.98
LSM6-202ENST00000502781 PCDHB12Q9Y5F1 795 aa27.41■■□□□ 1.98
LSM6-202ENST00000502781 PCDHA5Q9Y5H7 936 aa27.41■■□□□ 1.98
LSM6-202ENST00000502781 NLRC5Q86WI3 1866 aa27.4■■□□□ 1.98
LSM6-202ENST00000502781 KIAA1671Q9BY89 1806 aa27.4■■□□□ 1.98
LSM6-202ENST00000502781 CARNS1A5YM72 827 aa27.4■■□□□ 1.98
LSM6-202ENST00000502781 TGFB1I1O43294 461 aa27.4■■□□□ 1.98
LSM6-202ENST00000502781 ADRB2P07550 413 aa27.4■■□□□ 1.98
LSM6-202ENST00000502781 POU3F3P20264 500 aaPredicted RBP27.4■■□□□ 1.98
LSM6-202ENST00000502781 BCAR1P56945 870 aa27.4■■□□□ 1.98
LSM6-202ENST00000502781 ADGRE1Q14246 886 aa27.4■■□□□ 1.98
LSM6-202ENST00000502781 NAB2Q15742 525 aa27.4■■□□□ 1.98
LSM6-202ENST00000502781 SLC10A6Q3KNW5 377 aa27.4■■□□□ 1.98
LSM6-202ENST00000502781 ZBTB41Q5SVQ8 909 aa27.4■■□□□ 1.98
LSM6-202ENST00000502781 COLGALT2Q8IYK4 626 aa27.4■■□□□ 1.98
LSM6-202ENST00000502781 KLHL23Q8NBE8 558 aa27.4■■□□□ 1.98
LSM6-202ENST00000502781 GDPD5Q8WTR4 605 aa27.4■■□□□ 1.98
LSM6-202ENST00000502781 RPS6KC1Q96S38 1066 aa27.4■■□□□ 1.98
LSM6-202ENST00000502781 CNTN3Q9P232 1028 aa27.4■■□□□ 1.98
LSM6-202ENST00000502781 CPSF3Q9UKF6 684 aaKnown RBP27.4■■□□□ 1.98
LSM6-202ENST00000502781 AGO2Q9UKV8 859 aaKnown RBP27.4■■□□□ 1.98
LSM6-202ENST00000502781 ZC3H11AO75152 810 aaKnown RBP eCLIP27.39■■□□□ 1.98
LSM6-202ENST00000502781 GALTP07902 379 aa27.39■■□□□ 1.98
LSM6-202ENST00000502781 TNFSF9P41273 254 aa27.39■■□□□ 1.98
LSM6-202ENST00000502781 SNRPFP62306 86 aaKnown RBP27.39■■□□□ 1.98
LSM6-202ENST00000502781 POU5F1Q01860 360 aaKnown RBP27.39■■□□□ 1.98
LSM6-202ENST00000502781 GPM6BQ13491 265 aa27.39■■□□□ 1.98
LSM6-202ENST00000502781 MYLIPQ8WY64 445 aa27.39■■□□□ 1.98
LSM6-202ENST00000502781 POMGNT1Q8WZA1 660 aa27.39■■□□□ 1.98
LSM6-202ENST00000502781 PPP1R10Q96QC0 940 aaKnown RBP27.39■■□□□ 1.98
LSM6-202ENST00000502781 TMEM175Q9BSA9 504 aa27.39■■□□□ 1.98
LSM6-202ENST00000502781 TTC26A0AVF1 554 aa27.38■■□□□ 1.97
LSM6-202ENST00000502781 SMC2O95347 1197 aa27.38■■□□□ 1.97
LSM6-202ENST00000502781 ITGB1P05556 798 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms