RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 USP17L19D6RCP7 530 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 USP17L20D6RJB6 530 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 GOLGA8MH3BSY2 632 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 CLDN3O15551 220 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 FMO5P49326 533 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 ERVK-9P63128 1117 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 USP17L24Q0WX57 530 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 USP17L6PQ6QN14 398 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 RFX8Q6ZV50 586 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 DEPDC1BQ8WUY9 529 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 SEMA6BQ9H3T3 888 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 ANLNQ9NQW6 1124 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 PMS1P54277 932 aaKnown RBP18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 HP1BP3Q5SSJ5 553 aaPredicted RBP18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 C12orf60Q5U649 245 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 SYDE2Q5VT97 1194 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 NUDCD3Q8IVD9 361 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 PDZD8Q8NEN9 1154 aa18.27■□□□□ 0.51
HMGXB3-201ENST00000502717 BMP3P12645 472 aa18.26■□□□□ 0.51
HMGXB3-201ENST00000502717 IREB2P48200 963 aaKnown RBP18.26■□□□□ 0.51
HMGXB3-201ENST00000502717 ITGB3BPQ13352 177 aaPredicted RBP18.26■□□□□ 0.51
HMGXB3-201ENST00000502717 PDZD4Q76G19 769 aaPredicted RBP18.26■□□□□ 0.51
HMGXB3-201ENST00000502717 TMC3Q7Z5M5 1100 aa18.26■□□□□ 0.51
HMGXB3-201ENST00000502717 SPDYE1Q8NFV5 336 aaPredicted RBP18.26■□□□□ 0.51
HMGXB3-201ENST00000502717 NSL1Q96IY1 281 aa18.26■□□□□ 0.51
HMGXB3-201ENST00000502717 PSMC3IPQ9P2W1 217 aaPredicted RBP18.26■□□□□ 0.51
HMGXB3-201ENST00000502717 RICTORQ6R327 1708 aa18.26■□□□□ 0.51
HMGXB3-201ENST00000502717 A0A0A6YYK5 440 aaPredicted RBP18.26■□□□□ 0.51
HMGXB3-201ENST00000502717 SHOX2O60902 331 aaPredicted RBP18.26■□□□□ 0.51
HMGXB3-201ENST00000502717 ADRA2BP18089 450 aa18.26■□□□□ 0.51
HMGXB3-201ENST00000502717 TARSP26639 723 aaKnown RBP18.26■□□□□ 0.51
HMGXB3-201ENST00000502717 UBXN2AP68543 259 aa18.26■□□□□ 0.51
HMGXB3-201ENST00000502717 RABGAP1LQ5R372 815 aa18.26■□□□□ 0.51
HMGXB3-201ENST00000502717 TATDN2Q93075 761 aa18.26■□□□□ 0.51
HMGXB3-201ENST00000502717 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.26■□□□□ 0.51
HMGXB3-201ENST00000502717 OSBPP22059 807 aa18.26■□□□□ 0.51
HMGXB3-201ENST00000502717 COMTP21964 271 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 SPDYCQ5MJ68 293 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 C4orf33Q8N1A6 199 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 FBXO25Q8TCJ0 367 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 ATP6V0A1Q93050 837 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 CENPTQ96BT3 561 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 FAF2Q96CS3 445 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 PACSIN1Q9BY11 444 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 EMSYQ7Z589 1322 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 A0A087X0B3 334 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 A6NJR5 290 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 KITP10721 976 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 ARSEP51690 589 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 HIF1AQ16665 826 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 SLC27A3Q5K4L6 730 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 ENOSF1Q7L5Y1 443 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 CATSPER1Q8NEC5 780 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 NOP14P78316 857 aaKnown RBP18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 RARS2Q5T160 578 aaKnown RBP18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 CELF1Q92879 486 aaKnown RBP18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 L3MBTL1Q9Y468 752 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 NPHP3-ACAD11A0A0J9YXS1 232 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 EYA4O95677 639 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 STAT3P40763 770 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 KCTD2Q14681 263 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 GRAMD4Q6IC98 578 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 SDCCAG3Q96C92 435 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 HIC2Q96JB3 615 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 C11orf70Q9BRQ4 267 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 A1CFQ9NQ94 594 aaKnown RBP18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 IP6K2Q9UHH9 426 aa18.25■□□□□ 0.51
HMGXB3-201ENST00000502717 hCG_2014768A0A024R1R8 64 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 LRRIQ4A6NIV6 560 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 STAT2P52630 851 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 DNAJC3Q13217 504 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 ARHGEF16Q5VV41 709 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 DPP9Q86TI2 863 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 ZBTB8OSQ8IWT0 167 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 PGM2Q96G03 612 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 KLC2Q9H0B6 622 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 MED7O43513 233 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 ECE1P42892 770 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 CCDC125Q86Z20 511 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 ZNF34Q8IZ26 560 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 ATXN2LQ8WWM7 1075 aaKnown RBP18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 NRBF2Q96F24 287 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 UPF3AQ9H1J1 476 aaKnown RBP18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 PHTF1Q9UMS5 762 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 IQCA1LA6NCM1 817 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 ALAS1P13196 640 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 MAGEA4P43358 317 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 KCNJ1P48048 391 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 ITGA8P53708 1063 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 KCNMA1Q12791 1236 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 TBC1D10BQ4KMP7 808 aaPredicted RBP18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 MTBPQ96DY7 904 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 HAO1Q9UJM8 370 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 SLC4A7Q9Y6M7 1214 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 E7ENQ6 273 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 HSPA4LO95757 839 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 ZBED1O96006 694 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 ENO1P06733 434 aaKnown RBP18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 PRELPP51888 382 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 POLGP54098 1239 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms