RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 PPCSQ9HAB8 311 aa11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 CYP2D7A0A087X1C5 515 aa11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 NVLO15381 856 aaKnown RBP11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 NMT2O60551 498 aa11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 CDH16O75309 829 aa11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 ZWINTO95229 277 aa11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 NR2F2P24468 414 aa11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 SOX5P35711 763 aa11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 RPL21P46778 160 aaKnown RBP11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 DYNLL1P63167 89 aaKnown RBP11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 LRRC41Q15345 812 aa11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 ENOX2Q16206 610 aaKnown RBP11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 VSTM1Q6UX27 236 aa11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 FBXO33Q7Z6M2 555 aa11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 MIPOL1Q8TD10 442 aa11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 FGD4Q96M96 766 aa11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 ZIC5Q96T25 663 aa11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 TIPINQ9BVW5 301 aa11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 KCNK9Q9NPC2 374 aa11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 CHCHD3Q9NX63 227 aaKnown RBP11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 IL1RAPL1Q9NZN1 696 aa11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 SENP1Q9P0U3 644 aa11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 SCAF8Q9UPN6 1271 aaKnown RBP11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 PCDHA3Q9Y5H8 950 aa11.78□□□□□ -0.52
AC055717.1-201ENST00000502221 KLRF2D3W0D1 207 aa11.77□□□□□ -0.53
AC055717.1-201ENST00000502221 RNF8O76064 485 aa11.77□□□□□ -0.53
AC055717.1-201ENST00000502221 BRAFP15056 766 aa11.77□□□□□ -0.53
AC055717.1-201ENST00000502221 RPS12P25398 132 aaKnown RBP11.77□□□□□ -0.53
AC055717.1-201ENST00000502221 MARK3P27448 753 aa11.77□□□□□ -0.53
AC055717.1-201ENST00000502221 PTPN4P29074 926 aa11.77□□□□□ -0.53
AC055717.1-201ENST00000502221 HIBADHP31937 336 aaKnown RBP11.77□□□□□ -0.53
AC055717.1-201ENST00000502221 PTDSS1P48651 473 aaKnown RBP11.77□□□□□ -0.53
AC055717.1-201ENST00000502221 STAT4Q14765 748 aa11.77□□□□□ -0.53
AC055717.1-201ENST00000502221 NFIL3Q16649 462 aa11.77□□□□□ -0.53
AC055717.1-201ENST00000502221 HERC4Q5GLZ8 1057 aaPredicted RBP11.77□□□□□ -0.53
AC055717.1-201ENST00000502221 SPTY2D1Q68D10 685 aaPredicted RBP11.77□□□□□ -0.53
AC055717.1-201ENST00000502221 CCDC137Q6PK04 289 aaKnown RBP11.77□□□□□ -0.53
AC055717.1-201ENST00000502221 ZNF444Q8N0Y2 327 aaPredicted RBP11.77□□□□□ -0.53
AC055717.1-201ENST00000502221 SCFD1Q8WVM8 642 aa11.77□□□□□ -0.53
AC055717.1-201ENST00000502221 FAM136AQ96C01 138 aa11.77□□□□□ -0.53
AC055717.1-201ENST00000502221 MKNK2Q9HBH9 465 aa11.77□□□□□ -0.53
AC055717.1-201ENST00000502221 DBR1Q9UK59 544 aaKnown RBP11.77□□□□□ -0.53
AC055717.1-201ENST00000502221 PNMA3Q9UL41 463 aa11.77□□□□□ -0.53
AC055717.1-201ENST00000502221 CASP8AP2Q9UKL3 1982 aa11.77□□□□□ -0.53
AC055717.1-201ENST00000502221 SMIM23A6NLE4 172 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 TTC36A6NLP5 189 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 A8MUI8 341 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 CYTH3O43739 400 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 SLC9A1P19634 815 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 RRP1BQ14684 758 aaKnown RBP11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 KNOP1Q1ED39 458 aaKnown RBP11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 RSBN1LQ6PCB5 846 aaPredicted RBP11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 ECHDC2Q86YB7 292 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 RELL1Q8IUW5 271 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 FAM13CQ8NE31 585 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 LRRC8CQ8TDW0 803 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 GRK7Q8WTQ7 553 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 GLG1Q92896 1179 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 NSUN4Q96CB9 384 aaKnown RBP11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 ZNF333Q96JL9 665 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 GMLQ99445 158 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 MIS12Q9H081 205 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 GLT8D2Q9H1C3 349 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 IRAK4Q9NWZ3 460 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 GGA3Q9NZ52 723 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 PPP1R9AQ9ULJ8 1098 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 BAZ2AQ9UIF9 1905 aaKnown RBP11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 G3V3G9 751 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 IRF6O14896 467 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 CREB3O43889 395 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 ECEL1O95672 775 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 TTC4O95801 387 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 PENKP01210 267 aaPredicted RBP11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 TSPY3P0CV98 308 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 TSPY8P0CW00 308 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 TNFAIP3P21580 790 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 COILP38432 576 aaPredicted RBP11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 BMT2Q1RMZ1 405 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 SLC45A4Q5BKX6 768 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 DCAF8Q5TAQ9 597 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 C12orf60Q5U649 245 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 DCAF12L1Q5VU92 463 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 OR52E8Q6IFG1 317 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 LONP2Q86WA8 852 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 NELFCDQ8IXH7 590 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 PRELID2Q8N945 189 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 KLHL23Q8NBE8 558 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 UTP4Q969X6 686 aaKnown RBP11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 IFT43Q96FT9 208 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 RBM41Q96IZ5 413 aaKnown RBP11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 SYT15Q9BQS2 421 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 MMADHCQ9H3L0 296 aaPredicted RBP11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 GOLPH3Q9H4A6 298 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 LRRC19Q9H756 370 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 LRRC4CQ9HCJ2 640 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 CD209Q9NNX6 404 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 IL17RBQ9NRM6 502 aa11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 SMG5Q9UPR3 1016 aaKnown RBP11.76□□□□□ -0.53
AC055717.1-201ENST00000502221 NDC80O14777 642 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms