RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 C1RP00736 705 aa16.29■□□□□ 0.2
SEC61A1-207ENST00000498837 NTHL1P78549 312 aa16.29■□□□□ 0.2
SEC61A1-207ENST00000498837 TFDP1Q14186 410 aa16.29■□□□□ 0.2
SEC61A1-207ENST00000498837 PCBP1Q15365 356 aaKnown RBP eCLIP16.29■□□□□ 0.2
SEC61A1-207ENST00000498837 EARS2Q5JPH6 523 aaKnown RBP16.29■□□□□ 0.2
SEC61A1-207ENST00000498837 C1orf210Q8IVY1 113 aa16.29■□□□□ 0.2
SEC61A1-207ENST00000498837 GPR65Q8IYL9 337 aa16.29■□□□□ 0.2
SEC61A1-207ENST00000498837 DCLK2Q8N568 766 aa16.29■□□□□ 0.2
SEC61A1-207ENST00000498837 FGF14Q92915 247 aa16.29■□□□□ 0.2
SEC61A1-207ENST00000498837 PAAF1Q9BRP4 392 aa16.29■□□□□ 0.2
SEC61A1-207ENST00000498837 CYP46A1Q9Y6A2 500 aa16.29■□□□□ 0.2
SEC61A1-207ENST00000498837 NCOR2Q9Y618 2525 aa16.29■□□□□ 0.2
SEC61A1-207ENST00000498837 FAM205CA6NFA0 338 aa16.28■□□□□ 0.2
SEC61A1-207ENST00000498837 TADA2AO75478 443 aa16.28■□□□□ 0.2
SEC61A1-207ENST00000498837 FSHRP23945 695 aa16.28■□□□□ 0.2
SEC61A1-207ENST00000498837 ARL2P36404 184 aa16.28■□□□□ 0.2
SEC61A1-207ENST00000498837 GPC5P78333 572 aa16.28■□□□□ 0.2
SEC61A1-207ENST00000498837 POU5F1BQ06416 359 aa16.28■□□□□ 0.2
SEC61A1-207ENST00000498837 RTP2Q5QGT7 225 aa16.28■□□□□ 0.2
SEC61A1-207ENST00000498837 CPLX2Q6PUV4 134 aaKnown RBP16.28■□□□□ 0.2
SEC61A1-207ENST00000498837 PARM1Q6UWI2 310 aa16.28■□□□□ 0.2
SEC61A1-207ENST00000498837 GRASPQ7Z6J2 395 aaPredicted RBP16.28■□□□□ 0.2
SEC61A1-207ENST00000498837 PJA1Q8NG27 643 aa16.28■□□□□ 0.2
SEC61A1-207ENST00000498837 EIF2AK1Q9BQI3 630 aaKnown RBP16.28■□□□□ 0.2
SEC61A1-207ENST00000498837 PARP2Q9UGN5 583 aa16.28■□□□□ 0.2
SEC61A1-207ENST00000498837 A0A087WWV3 80 aa16.27■□□□□ 0.2
SEC61A1-207ENST00000498837 REC8O95072 547 aa16.27■□□□□ 0.2
SEC61A1-207ENST00000498837 GLRA2P23416 452 aa16.27■□□□□ 0.2
SEC61A1-207ENST00000498837 STARD6P59095 220 aa16.27■□□□□ 0.2
SEC61A1-207ENST00000498837 GRIK3Q13003 919 aa16.27■□□□□ 0.2
SEC61A1-207ENST00000498837 SLC27A1Q6PCB7 646 aa16.27■□□□□ 0.2
SEC61A1-207ENST00000498837 DGLUCYQ7Z3D6 616 aa16.27■□□□□ 0.2
SEC61A1-207ENST00000498837 HACE1Q8IYU2 909 aa16.27■□□□□ 0.2
SEC61A1-207ENST00000498837 MAML2Q8IZL2 1156 aaPredicted RBP16.27■□□□□ 0.2
SEC61A1-207ENST00000498837 HASPINQ8TF76 798 aa16.27■□□□□ 0.2
SEC61A1-207ENST00000498837 HINFPQ9BQA5 517 aa16.27■□□□□ 0.2
SEC61A1-207ENST00000498837 CLSTN3Q9BQT9 956 aa16.27■□□□□ 0.2
SEC61A1-207ENST00000498837 FBXW11Q9UKB1 542 aa16.27■□□□□ 0.2
SEC61A1-207ENST00000498837 TPRP12270 2363 aaKnown RBP16.27■□□□□ 0.19
SEC61A1-207ENST00000498837 CACNA1BQ00975 2339 aa16.27■□□□□ 0.19
SEC61A1-207ENST00000498837 RALGAPA1Q6GYQ0 2036 aa16.26■□□□□ 0.19
SEC61A1-207ENST00000498837 A0A1B0GUA9 196 aa16.26■□□□□ 0.19
SEC61A1-207ENST00000498837 BAG4O95429 457 aaKnown RBP16.26■□□□□ 0.19
SEC61A1-207ENST00000498837 CREMQ03060 361 aa16.26■□□□□ 0.19
SEC61A1-207ENST00000498837 SCRN1Q12765 414 aa16.26■□□□□ 0.19
SEC61A1-207ENST00000498837 SNW1Q13573 536 aaKnown RBP16.26■□□□□ 0.19
SEC61A1-207ENST00000498837 HSP90AA2PQ14568 343 aaPredicted RBP16.26■□□□□ 0.19
SEC61A1-207ENST00000498837 ZC3H14Q6PJT7 736 aaKnown RBP16.26■□□□□ 0.19
SEC61A1-207ENST00000498837 SLFN12Q8IYM2 578 aa16.26■□□□□ 0.19
SEC61A1-207ENST00000498837 NAP1L4Q99733 375 aaKnown RBP16.26■□□□□ 0.19
SEC61A1-207ENST00000498837 HSD17B14Q9BPX1 270 aa16.26■□□□□ 0.19
SEC61A1-207ENST00000498837 CXCL16Q9H2A7 254 aa16.26■□□□□ 0.19
SEC61A1-207ENST00000498837 CDH7Q9ULB5 785 aa16.26■□□□□ 0.19
SEC61A1-207ENST00000498837 ZFP37Q9Y6Q3 630 aaPredicted RBP16.26■□□□□ 0.19
SEC61A1-207ENST00000498837 SF3B1O75533 1304 aaKnown RBP eCLIP16.25■□□□□ 0.196e-11■■■■■ 38.2
SEC61A1-207ENST00000498837 CASTOR2A6NHX0 329 aa16.25■□□□□ 0.19
SEC61A1-207ENST00000498837 ADAM12O43184 909 aa16.25■□□□□ 0.19
SEC61A1-207ENST00000498837 DGAT1O75907 488 aa16.25■□□□□ 0.19
SEC61A1-207ENST00000498837 LYPLA2O95372 231 aa16.25■□□□□ 0.19
SEC61A1-207ENST00000498837 FAM171A1Q5VUB5 890 aa16.25■□□□□ 0.19
SEC61A1-207ENST00000498837 CEP57Q86XR8 500 aa16.25■□□□□ 0.19
SEC61A1-207ENST00000498837 SUMF1Q8NBK3 374 aa16.25■□□□□ 0.19
SEC61A1-207ENST00000498837 LNX1Q8TBB1 728 aaPredicted RBP16.25■□□□□ 0.19
SEC61A1-207ENST00000498837 PIGOQ8TEQ8 1089 aa16.25■□□□□ 0.19
SEC61A1-207ENST00000498837 RUBCNQ92622 972 aa16.25■□□□□ 0.19
SEC61A1-207ENST00000498837 TTPALQ9BTX7 342 aa16.25■□□□□ 0.19
SEC61A1-207ENST00000498837 NFKBIZQ9BYH8 718 aa16.25■□□□□ 0.19
SEC61A1-207ENST00000498837 TM6SF1Q9BZW5 370 aa16.25■□□□□ 0.19
SEC61A1-207ENST00000498837 POLR3FQ9H1D9 316 aaPredicted RBP16.25■□□□□ 0.19
SEC61A1-207ENST00000498837 ANKEF1Q9NU02 776 aa16.25■□□□□ 0.19
SEC61A1-207ENST00000498837 MTF2Q9Y483 593 aaPredicted RBP16.25■□□□□ 0.19
SEC61A1-207ENST00000498837 F5P12259 2224 aa16.25■□□□□ 0.19
SEC61A1-207ENST00000498837 CITO14578 2027 aa16.24■□□□□ 0.19
SEC61A1-207ENST00000498837 KANSL1LA0AUZ9 987 aa16.24■□□□□ 0.19
SEC61A1-207ENST00000498837 TTLL13PA6NNM8 815 aa16.24■□□□□ 0.19
SEC61A1-207ENST00000498837 CCL16O15467 120 aa16.24■□□□□ 0.19
SEC61A1-207ENST00000498837 KIF4AO95239 1232 aa16.24■□□□□ 0.19
SEC61A1-207ENST00000498837 RARRES1P49788 294 aa16.24■□□□□ 0.19
SEC61A1-207ENST00000498837 NR5A1Q13285 461 aa16.24■□□□□ 0.19
SEC61A1-207ENST00000498837 TUSC3Q13454 348 aa16.24■□□□□ 0.19
SEC61A1-207ENST00000498837 PSMD5Q16401 504 aa16.24■□□□□ 0.19
SEC61A1-207ENST00000498837 PPM1LQ5SGD2 360 aa16.24■□□□□ 0.19
SEC61A1-207ENST00000498837 MAEAQ7L5Y9 396 aa16.24■□□□□ 0.19
SEC61A1-207ENST00000498837 ITFG1Q8TB96 612 aa16.24■□□□□ 0.19
SEC61A1-207ENST00000498837 PIK3R5Q8WYR1 880 aa16.24■□□□□ 0.19
SEC61A1-207ENST00000498837 FGF13Q92913 245 aa16.24■□□□□ 0.19
SEC61A1-207ENST00000498837 SHDQ96IW2 340 aa16.24■□□□□ 0.19
SEC61A1-207ENST00000498837 GPRC5CQ9NQ84 441 aa16.24■□□□□ 0.19
SEC61A1-207ENST00000498837 PDRG1Q9NUG6 133 aa16.24■□□□□ 0.19
SEC61A1-207ENST00000498837 PCDHA12Q9UN75 941 aa16.24■□□□□ 0.19
SEC61A1-207ENST00000498837 POLIQ9UNA4 740 aa16.24■□□□□ 0.19
SEC61A1-207ENST00000498837 ZMYM2Q9UBW7 1377 aa16.24■□□□□ 0.19
SEC61A1-207ENST00000498837 STK36Q9NRP7 1315 aa16.23■□□□□ 0.19
SEC61A1-207ENST00000498837 LRRIQ4A6NIV6 560 aa16.23■□□□□ 0.19
SEC61A1-207ENST00000498837 PTGESO14684 152 aa16.23■□□□□ 0.19
SEC61A1-207ENST00000498837 CDKL5O76039 1030 aa16.23■□□□□ 0.19
SEC61A1-207ENST00000498837 C8AP07357 584 aa16.23■□□□□ 0.19
SEC61A1-207ENST00000498837 HNRNPA1P09651 372 aaKnown RBP eCLIP16.23■□□□□ 0.19
SEC61A1-207ENST00000498837 XBP1P17861 261 aa16.23■□□□□ 0.19
SEC61A1-207ENST00000498837 CD72P21854 359 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms