RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 DCLRE1CQ96SD1 692 aaKnown RBP3.5□□□□□ -1.85
RBM39-242ENST00000498280 ORAI3Q9BRQ5 295 aa3.5□□□□□ -1.85
RBM39-242ENST00000498280 LRFN3Q9BTN0 628 aa3.5□□□□□ -1.85
RBM39-242ENST00000498280 FANCLQ9NW38 375 aa3.5□□□□□ -1.85
RBM39-242ENST00000498280 TMEM260Q9NX78 707 aa3.5□□□□□ -1.85
RBM39-242ENST00000498280 USP36Q9P275 1121 aaKnown RBP3.5□□□□□ -1.85
RBM39-242ENST00000498280 RNF7Q9UBF6 113 aa3.5□□□□□ -1.85
RBM39-242ENST00000498280 TLK1Q9UKI8 766 aa3.5□□□□□ -1.85
RBM39-242ENST00000498280 ZKSCAN5Q9Y2L8 839 aa3.5□□□□□ -1.85
RBM39-242ENST00000498280 CD2APQ9Y5K6 639 aa3.5□□□□□ -1.85
RBM39-242ENST00000498280 CADPSQ9ULU8 1353 aa3.5□□□□□ -1.85
RBM39-242ENST00000498280 PRAMEF4O60810 478 aa3.49□□□□□ -1.85
RBM39-242ENST00000498280 ITGA10O75578 1167 aa3.49□□□□□ -1.85
RBM39-242ENST00000498280 EGR2P11161 476 aaPredicted RBP3.49□□□□□ -1.85
RBM39-242ENST00000498280 HSP90B1P14625 803 aaKnown RBP3.49□□□□□ -1.85
RBM39-242ENST00000498280 FLT3P36888 993 aa3.49□□□□□ -1.85
RBM39-242ENST00000498280 CHN2P52757 468 aa3.49□□□□□ -1.85
RBM39-242ENST00000498280 DDB1Q16531 1140 aa3.49□□□□□ -1.85
RBM39-242ENST00000498280 BMT2Q1RMZ1 405 aa3.49□□□□□ -1.85
RBM39-242ENST00000498280 CNNM4Q6P4Q7 775 aa3.49□□□□□ -1.85
RBM39-242ENST00000498280 GPR149Q86SP6 731 aa3.49□□□□□ -1.85
RBM39-242ENST00000498280 FAM177A1Q8N128 213 aaPredicted RBP3.49□□□□□ -1.85
RBM39-242ENST00000498280 SMC1BQ8NDV3 1235 aa3.49□□□□□ -1.85
RBM39-242ENST00000498280 PHACTR3Q96KR7 559 aa3.49□□□□□ -1.85
RBM39-242ENST00000498280 BRIP1Q9BX63 1249 aa3.49□□□□□ -1.85
RBM39-242ENST00000498280 POGKQ9P215 609 aa3.49□□□□□ -1.85
RBM39-242ENST00000498280 PRSS50Q9UI38 385 aa3.49□□□□□ -1.85
RBM39-242ENST00000498280 PNPLA7Q6ZV29 1317 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 ST20-MTHFSA0A0A6YYL1 179 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 ENPP3O14638 875 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 MAFGO15525 162 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 GAS7O60861 476 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 CDC45O75419 566 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 RFPL3O75679 317 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 C1QL1O75973 258 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 MATN4O95460 622 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 LPLP06858 475 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 LTA4HP09960 611 aaKnown RBP3.48□□□□□ -1.85
RBM39-242ENST00000498280 MANFP55145 182 aaKnown RBP3.48□□□□□ -1.85
RBM39-242ENST00000498280 KRTAP10-6P60371 365 aaPredicted RBP3.48□□□□□ -1.85
RBM39-242ENST00000498280 TERF2Q15554 542 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 PITRM1Q5JRX3 1037 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 PRAMEF14Q5SWL7 426 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 LCE1AQ5T7P2 110 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 EFCAB12Q6NXP0 572 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 DRICH1Q6PGQ1 229 aaPredicted RBP3.48□□□□□ -1.85
RBM39-242ENST00000498280 LMBR1LQ6UX01 489 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 HOMER1Q86YM7 354 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 SRRM1Q8IYB3 904 aaKnown RBP3.48□□□□□ -1.85
RBM39-242ENST00000498280 CAGE1Q8TC20 777 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 APPBP2Q92624 585 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 TFAP2CQ92754 450 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 ZSWIM1Q9BR11 485 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 DUSP26Q9BV47 211 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 MAGEC2Q9UBF1 373 aaPredicted RBP3.48□□□□□ -1.85
RBM39-242ENST00000498280 NUMBLQ9Y6R0 609 aa3.48□□□□□ -1.85
RBM39-242ENST00000498280 LRRC3CA6NJW4 275 aa3.47□□□□□ -1.85
RBM39-242ENST00000498280 DRGXA6NNA5 263 aa3.47□□□□□ -1.85
RBM39-242ENST00000498280 DIRC3C9JPN6 131 aa3.47□□□□□ -1.85
RBM39-242ENST00000498280 ESRRBO95718 433 aa3.47□□□□□ -1.85
RBM39-242ENST00000498280 HLA-DOAP06340 250 aa3.47□□□□□ -1.85
RBM39-242ENST00000498280 SPATA31D3P0C874 917 aa3.47□□□□□ -1.85
RBM39-242ENST00000498280 ITGAMP11215 1152 aa3.47□□□□□ -1.85
RBM39-242ENST00000498280 CTSSP25774 331 aa3.47□□□□□ -1.85
RBM39-242ENST00000498280 KPNA1P52294 538 aaPredicted RBP3.47□□□□□ -1.85
RBM39-242ENST00000498280 PDCD1Q15116 288 aa3.47□□□□□ -1.85
RBM39-242ENST00000498280 ABHD17BQ5VST6 288 aa3.47□□□□□ -1.85
RBM39-242ENST00000498280 EGFLAMQ63HQ2 1017 aa3.47□□□□□ -1.85
RBM39-242ENST00000498280 B3GNTL1Q67FW5 361 aaPredicted RBP3.47□□□□□ -1.85
RBM39-242ENST00000498280 SPATA31D4Q6ZUB0 917 aa3.47□□□□□ -1.85
RBM39-242ENST00000498280 C16orf86Q6ZW13 317 aa3.47□□□□□ -1.85
RBM39-242ENST00000498280 LRRTM3Q86VH5 581 aa3.47□□□□□ -1.85
RBM39-242ENST00000498280 ZNF610Q8N9Z0 462 aa3.47□□□□□ -1.85
RBM39-242ENST00000498280 OR56A1Q8NGH5 318 aa3.47□□□□□ -1.85
RBM39-242ENST00000498280 SNX33Q8WV41 574 aa3.47□□□□□ -1.85
RBM39-242ENST00000498280 CDC5LQ99459 802 aaKnown RBP3.47□□□□□ -1.85
RBM39-242ENST00000498280 CLCA2Q9UQC9 943 aa3.47□□□□□ -1.85
RBM39-242ENST00000498280 FPGT-TNNI3KV9GXZ4 949 aa3.47□□□□□ -1.85
RBM39-242ENST00000498280 PRSS23O95084 383 aa3.46□□□□□ -1.86
RBM39-242ENST00000498280 CFIP05156 583 aa3.46□□□□□ -1.86
RBM39-242ENST00000498280 RBP3P10745 1247 aa3.46□□□□□ -1.86
RBM39-242ENST00000498280 HOXB6P17509 224 aaKnown RBP3.46□□□□□ -1.86
RBM39-242ENST00000498280 POU3F2P20265 443 aaPredicted RBP3.46□□□□□ -1.86
RBM39-242ENST00000498280 XPAP23025 273 aaPredicted RBP3.46□□□□□ -1.86
RBM39-242ENST00000498280 HSD3B2P26439 372 aa3.46□□□□□ -1.86
RBM39-242ENST00000498280 ADCYAP1R1P41586 468 aa3.46□□□□□ -1.86
RBM39-242ENST00000498280 LGALS4P56470 323 aa3.46□□□□□ -1.86
RBM39-242ENST00000498280 SIM1P81133 766 aaPredicted RBP3.46□□□□□ -1.86
RBM39-242ENST00000498280 MXRA7P84157 204 aa3.46□□□□□ -1.86
RBM39-242ENST00000498280 NHLH1Q02575 133 aa3.46□□□□□ -1.86
RBM39-242ENST00000498280 FOXF2Q12947 444 aa3.46□□□□□ -1.86
RBM39-242ENST00000498280 MPP3Q13368 585 aa3.46□□□□□ -1.86
RBM39-242ENST00000498280 CT83Q5H943 113 aa3.46□□□□□ -1.86
RBM39-242ENST00000498280 AGAP9Q5VTM2 703 aa3.46□□□□□ -1.86
RBM39-242ENST00000498280 KIF18BQ86Y91 864 aa3.46□□□□□ -1.86
RBM39-242ENST00000498280 DHX37Q8IY37 1157 aaKnown RBP3.46□□□□□ -1.86
RBM39-242ENST00000498280 C9orf106Q8NAJ2 232 aa3.46□□□□□ -1.86
RBM39-242ENST00000498280 NACC2Q96BF6 587 aa3.46□□□□□ -1.86
RBM39-242ENST00000498280 Q96MF0 132 aa3.46□□□□□ -1.86
RBM39-242ENST00000498280 TARS2Q9BW92 718 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms