RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 KRT78Q8N1N4 520 aa4.49□□□□□ -1.69
CALD1-224ENST00000498254 ZGPATQ8N5A5 531 aaKnown RBP4.49□□□□□ -1.69
CALD1-224ENST00000498254 REPS2Q8NFH8 660 aa4.49□□□□□ -1.69
CALD1-224ENST00000498254 DEPTORQ8TB45 409 aa4.49□□□□□ -1.69
CALD1-224ENST00000498254 SNX33Q8WV41 574 aa4.49□□□□□ -1.69
CALD1-224ENST00000498254 PPM1EQ8WY54 764 aa4.49□□□□□ -1.69
CALD1-224ENST00000498254 HOXB13Q92826 284 aaPredicted RBP4.49□□□□□ -1.69
CALD1-224ENST00000498254 ZBTB8AQ96BR9 441 aa4.49□□□□□ -1.69
CALD1-224ENST00000498254 LIN37Q96GY3 246 aaPredicted RBP4.49□□□□□ -1.69
CALD1-224ENST00000498254 SAMD11Q96NU1 681 aa4.49□□□□□ -1.69
CALD1-224ENST00000498254 DMRTA2Q96SC8 542 aa4.49□□□□□ -1.69
CALD1-224ENST00000498254 C11orf84Q9BUA3 381 aaPredicted RBP4.49□□□□□ -1.69
CALD1-224ENST00000498254 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.49□□□□□ -1.69
CALD1-224ENST00000498254 LRRC27Q9C0I9 530 aa4.49□□□□□ -1.69
CALD1-224ENST00000498254 SENP6Q9GZR1 1112 aaPredicted RBP4.49□□□□□ -1.69
CALD1-224ENST00000498254 MANSC1Q9H8J5 431 aa4.49□□□□□ -1.69
CALD1-224ENST00000498254 CNTD2Q9H8S5 307 aa4.49□□□□□ -1.69
CALD1-224ENST00000498254 KIAA1586Q9HCI6 787 aa4.49□□□□□ -1.69
CALD1-224ENST00000498254 ARFGAP3Q9NP61 516 aa4.49□□□□□ -1.69
CALD1-224ENST00000498254 DCP1AQ9NPI6 582 aaPredicted RBP4.49□□□□□ -1.69
CALD1-224ENST00000498254 SLAMF7Q9NQ25 335 aa4.49□□□□□ -1.69
CALD1-224ENST00000498254 PNPOQ9NVS9 261 aa4.49□□□□□ -1.69
CALD1-224ENST00000498254 ING3Q9NXR8 418 aa4.49□□□□□ -1.69
CALD1-224ENST00000498254 FEZ2Q9UHY8 353 aaPredicted RBP4.49□□□□□ -1.69
CALD1-224ENST00000498254 OGDHLQ9ULD0 1010 aa4.49□□□□□ -1.69
CALD1-224ENST00000498254 RUVBL1Q9Y265 456 aaKnown RBP4.49□□□□□ -1.69
CALD1-224ENST00000498254 LRCH1Q9Y2L9 728 aa4.49□□□□□ -1.69
CALD1-224ENST00000498254 PCDHGB2Q9Y5G2 931 aa4.49□□□□□ -1.69
CALD1-224ENST00000498254 MYBBP1AQ9BQG0 1328 aaKnown RBP4.48□□□□□ -1.69
CALD1-224ENST00000498254 LRRC10BA6NIK2 292 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 SLC16A6O15403 523 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 SGTAO43765 313 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 FARP2O94887 1054 aaPredicted RBP4.48□□□□□ -1.69
CALD1-224ENST00000498254 HMGCRP04035 888 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 TYRP14679 529 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 PFKLP17858 780 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 MALP21145 153 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 SMARCA1P28370 1054 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 CHKAP35790 457 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 STT3AP46977 705 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 CASP5P51878 434 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 MAPK10P53779 464 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 EPHB3P54753 998 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 MLLT6P55198 1093 aaPredicted RBP4.48□□□□□ -1.69
CALD1-224ENST00000498254 SNAPC2Q13487 334 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 RAPGEF1Q13905 1077 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 ACAP1Q15027 740 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 TARBP2Q15633 366 aaKnown RBP4.48□□□□□ -1.69
CALD1-224ENST00000498254 MAN2A1Q16706 1144 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 FAM209BQ5JX69 171 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 KLHDC7AQ5VTJ3 777 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 SYDE1Q6ZW31 735 aaPredicted RBP4.48□□□□□ -1.69
CALD1-224ENST00000498254 B3GNT8Q7Z7M8 397 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 IL31RAQ8NI17 732 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 PPP1R14CQ8TAE6 165 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 ZNF480Q8WV37 535 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 PHKBQ93100 1093 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 NKD2Q969F2 451 aaPredicted RBP4.48□□□□□ -1.69
CALD1-224ENST00000498254 APIPQ96GX9 242 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 PAWRQ96IZ0 340 aaKnown RBP4.48□□□□□ -1.69
CALD1-224ENST00000498254 MRGPRX4Q96LA9 322 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 SCLT1Q96NL6 688 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 KIAA1683Q9H0B3 1180 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 ZNF552Q9H707 407 aaPredicted RBP4.48□□□□□ -1.69
CALD1-224ENST00000498254 PRDM16Q9HAZ2 1276 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 ZNF287Q9HBT7 754 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 TRMT13Q9NUP7 481 aaKnown RBP4.48□□□□□ -1.69
CALD1-224ENST00000498254 LUZP4Q9P127 313 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 CPNE7Q9UBL6 633 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 AJAP1Q9UKB5 411 aaPredicted RBP4.48□□□□□ -1.69
CALD1-224ENST00000498254 PCDHA5Q9Y5H7 936 aa4.48□□□□□ -1.69
CALD1-224ENST00000498254 CARMIL2Q6F5E8 1435 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 MYOCOSA0A1B0GUC4 107 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 DDX3XO00571 662 aaKnown RBP eCLIP4.47□□□□□ -1.69
CALD1-224ENST00000498254 TBX3O15119 743 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 DAPK3O43293 454 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 PHF2O75151 1096 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 GPR32O75388 356 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 WDHD1O75717 1129 aaPredicted RBP4.47□□□□□ -1.69
CALD1-224ENST00000498254 ALDH1A2O94788 518 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 KNG1P01042 644 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 AHSGP02765 367 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 AMY1AP04745 511 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 NPR1P16066 1061 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 FPR1P21462 350 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 PTPN7P35236 360 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 PPM1AP35813 382 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 SREBF1P36956 1147 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 IL6STP40189 918 aaPredicted RBP4.47□□□□□ -1.69
CALD1-224ENST00000498254 SUMO3P55854 103 aaPredicted RBP4.47□□□□□ -1.69
CALD1-224ENST00000498254 FOXO4P98177 505 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 MEF2AQ02078 507 aaPredicted RBP4.47□□□□□ -1.69
CALD1-224ENST00000498254 ZNF543Q08ER8 600 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 ELF2Q15723 593 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 PKN1Q16512 942 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 FLYWCH1Q4VC44 716 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 KHDC1LQ5JSQ8 128 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 GGT6Q6P531 493 aa4.47□□□□□ -1.69
CALD1-224ENST00000498254 CXXC5Q7LFL8 322 aaKnown RBP4.47□□□□□ -1.69
CALD1-224ENST00000498254 PPP1R3BQ86XI6 285 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms