RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 PTH2RP49190 550 aa5.68□□□□□ -1.5
SMC4-227ENST00000497984 SCAPQ12770 1279 aa5.68□□□□□ -1.5
SMC4-227ENST00000497984 SART3Q15020 963 aaKnown RBP5.68□□□□□ -1.5
SMC4-227ENST00000497984 PRAMEF14Q5SWL7 426 aa5.68□□□□□ -1.5
SMC4-227ENST00000497984 BROXQ5VW32 411 aa5.68□□□□□ -1.5
SMC4-227ENST00000497984 FBXO42Q6P3S6 717 aa5.68□□□□□ -1.5
SMC4-227ENST00000497984 DHX37Q8IY37 1157 aaKnown RBP5.68□□□□□ -1.5
SMC4-227ENST00000497984 NIM1KQ8IY84 436 aa5.68□□□□□ -1.5
SMC4-227ENST00000497984 SIMC1Q8NDZ2 872 aa5.68□□□□□ -1.5
SMC4-227ENST00000497984 KCTD10Q9H3F6 313 aa5.68□□□□□ -1.5
SMC4-227ENST00000497984 EMC7Q9NPA0 242 aa5.68□□□□□ -1.5
SMC4-227ENST00000497984 USP15Q9Y4E8 981 aaPredicted RBP5.68□□□□□ -1.5
SMC4-227ENST00000497984 FPGT-TNNI3KV9GXZ4 949 aa5.68□□□□□ -1.5
SMC4-227ENST00000497984 HLA-DOAP06340 250 aa5.67□□□□□ -1.5
SMC4-227ENST00000497984 LPLP06858 475 aa5.67□□□□□ -1.5
SMC4-227ENST00000497984 CRHR1P34998 444 aa5.67□□□□□ -1.5
SMC4-227ENST00000497984 PLA2G5P39877 138 aa5.67□□□□□ -1.5
SMC4-227ENST00000497984 MPLP40238 635 aa5.67□□□□□ -1.5
SMC4-227ENST00000497984 FLT3LGP49771 235 aa5.67□□□□□ -1.5
SMC4-227ENST00000497984 IL2P60568 153 aa5.67□□□□□ -1.5
SMC4-227ENST00000497984 BLOC1S1P78537 153 aa5.67□□□□□ -1.5
SMC4-227ENST00000497984 RESTQ13127 1097 aa5.67□□□□□ -1.5
SMC4-227ENST00000497984 AGAP9Q5VTM2 703 aa5.67□□□□□ -1.5
SMC4-227ENST00000497984 AHI1Q8N157 1196 aa5.67□□□□□ -1.5
SMC4-227ENST00000497984 OR2W6PQ8NHA6 318 aa5.67□□□□□ -1.5
SMC4-227ENST00000497984 SLC35B2Q8TB61 432 aa5.67□□□□□ -1.5
SMC4-227ENST00000497984 SLC5A5Q92911 643 aa5.67□□□□□ -1.5
SMC4-227ENST00000497984 FANCLQ9NW38 375 aa5.67□□□□□ -1.5
SMC4-227ENST00000497984 INSL6Q9Y581 213 aa5.67□□□□□ -1.5
SMC4-227ENST00000497984 DRGXA6NNA5 263 aa5.66□□□□□ -1.5
SMC4-227ENST00000497984 ADCY6O43306 1168 aa5.66□□□□□ -1.5
SMC4-227ENST00000497984 ESRRBO95718 433 aa5.66□□□□□ -1.5
SMC4-227ENST00000497984 CFIP05156 583 aa5.66□□□□□ -1.5
SMC4-227ENST00000497984 ELANEP08246 267 aa5.66□□□□□ -1.5
SMC4-227ENST00000497984 CANXP27824 592 aaKnown RBP5.66□□□□□ -1.5
SMC4-227ENST00000497984 CXCR5P32302 372 aa5.66□□□□□ -1.5
SMC4-227ENST00000497984 CHN2P52757 468 aa5.66□□□□□ -1.5
SMC4-227ENST00000497984 LGALS4P56470 323 aa5.66□□□□□ -1.5
SMC4-227ENST00000497984 PDCD1Q15116 288 aa5.66□□□□□ -1.5
SMC4-227ENST00000497984 DDB1Q16531 1140 aa5.66□□□□□ -1.5
SMC4-227ENST00000497984 CT83Q5H943 113 aa5.66□□□□□ -1.5
SMC4-227ENST00000497984 PDZD4Q76G19 769 aaPredicted RBP5.66□□□□□ -1.5
SMC4-227ENST00000497984 ZFP28Q8NHY6 868 aa5.66□□□□□ -1.5
SMC4-227ENST00000497984 ZNF480Q8WV37 535 aa5.66□□□□□ -1.5
SMC4-227ENST00000497984 APPBP2Q92624 585 aa5.66□□□□□ -1.5
SMC4-227ENST00000497984 KCNG1Q9UIX4 513 aa5.66□□□□□ -1.5
SMC4-227ENST00000497984 SPATA31A6Q5VVP1 1343 aa5.66□□□□□ -1.5
SMC4-227ENST00000497984 PJA2O43164 708 aa5.65□□□□□ -1.5
SMC4-227ENST00000497984 DALRD3Q5D0E6 543 aaKnown RBP5.65□□□□□ -1.5
SMC4-227ENST00000497984 FAM47AQ5JRC9 791 aa5.65□□□□□ -1.5
SMC4-227ENST00000497984 C11orf74Q86VG3 221 aa5.65□□□□□ -1.5
SMC4-227ENST00000497984 RASSF3Q86WH2 238 aa5.65□□□□□ -1.5
SMC4-227ENST00000497984 MAST3O60307 1309 aa5.65□□□□□ -1.51
SMC4-227ENST00000497984 CXorf49A8MYA2 514 aaPredicted RBP5.64□□□□□ -1.51
SMC4-227ENST00000497984 INO80B-WBP1J3KQ70 363 aa5.64□□□□□ -1.51
SMC4-227ENST00000497984 WNT10BO00744 389 aa5.64□□□□□ -1.51
SMC4-227ENST00000497984 RAB11FIP3O75154 756 aa5.64□□□□□ -1.51
SMC4-227ENST00000497984 CDKL5O76039 1030 aa5.64□□□□□ -1.51
SMC4-227ENST00000497984 CLRN1P58418 232 aa5.64□□□□□ -1.51
SMC4-227ENST00000497984 MPP3Q13368 585 aa5.64□□□□□ -1.51
SMC4-227ENST00000497984 ERCC6LQ2NKX8 1250 aa5.64□□□□□ -1.51
SMC4-227ENST00000497984 MST1LQ2TV78 715 aa5.64□□□□□ -1.51
SMC4-227ENST00000497984 ATXN7L2Q5T6C5 722 aaPredicted RBP5.64□□□□□ -1.51
SMC4-227ENST00000497984 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.64□□□□□ -1.51
SMC4-227ENST00000497984 ARMC6Q6NXE6 501 aa5.64□□□□□ -1.51
SMC4-227ENST00000497984 RHOT2Q8IXI1 618 aa5.64□□□□□ -1.51
SMC4-227ENST00000497984 BOLLQ8N9W6 283 aaKnown RBP5.64□□□□□ -1.51
SMC4-227ENST00000497984 REPS2Q8NFH8 660 aa5.64□□□□□ -1.51
SMC4-227ENST00000497984 OR56A1Q8NGH5 318 aa5.64□□□□□ -1.51
SMC4-227ENST00000497984 LRFN3Q9BTN0 628 aa5.64□□□□□ -1.51
SMC4-227ENST00000497984 INO80BQ9C086 356 aaPredicted RBP5.64□□□□□ -1.51
SMC4-227ENST00000497984 KLHL11Q9NVR0 708 aa5.64□□□□□ -1.51
SMC4-227ENST00000497984 NOC2LQ9Y3T9 749 aaKnown RBP5.64□□□□□ -1.51
SMC4-227ENST00000497984 PNPLA7Q6ZV29 1317 aa5.64□□□□□ -1.51
SMC4-227ENST00000497984 RPTORQ8N122 1335 aa5.64□□□□□ -1.51
SMC4-227ENST00000497984 SALL3Q9BXA9 1300 aa5.64□□□□□ -1.51
SMC4-227ENST00000497984 ATRNL1Q5VV63 1379 aa5.64□□□□□ -1.51
SMC4-227ENST00000497984 GSG1L2A8MUP6 293 aa5.63□□□□□ -1.51
SMC4-227ENST00000497984 ITGAMP11215 1152 aa5.63□□□□□ -1.51
SMC4-227ENST00000497984 KRTAP10-11P60412 298 aa5.63□□□□□ -1.51
SMC4-227ENST00000497984 ZNF362Q5T0B9 420 aaPredicted RBP5.63□□□□□ -1.51
SMC4-227ENST00000497984 B3GNTL1Q67FW5 361 aaPredicted RBP5.63□□□□□ -1.51
SMC4-227ENST00000497984 ZNF572Q7Z3I7 529 aaPredicted RBP5.63□□□□□ -1.51
SMC4-227ENST00000497984 GPR149Q86SP6 731 aa5.63□□□□□ -1.51
SMC4-227ENST00000497984 TRMT2AQ8IZ69 625 aaKnown RBP5.63□□□□□ -1.51
SMC4-227ENST00000497984 SLC44A3Q8N4M1 653 aa5.63□□□□□ -1.51
SMC4-227ENST00000497984 FUBP1Q96AE4 644 aaKnown RBP5.63□□□□□ -1.51
SMC4-227ENST00000497984 EAF2Q96CJ1 260 aaPredicted RBP5.63□□□□□ -1.51
SMC4-227ENST00000497984 MFSD3Q96ES6 412 aa5.63□□□□□ -1.51
SMC4-227ENST00000497984 PAWRQ96IZ0 340 aaKnown RBP5.63□□□□□ -1.51
SMC4-227ENST00000497984 RSAD1Q9HA92 442 aa5.63□□□□□ -1.51
SMC4-227ENST00000497984 EDARQ9UNE0 448 aa5.63□□□□□ -1.51
SMC4-227ENST00000497984 PLAAQ9Y263 795 aa5.63□□□□□ -1.51
SMC4-227ENST00000497984 ATP11BQ9Y2G3 1177 aa5.63□□□□□ -1.51
SMC4-227ENST00000497984 FOSP01100 380 aaPredicted RBP5.62□□□□□ -1.51
SMC4-227ENST00000497984 ATXN1P54253 815 aaKnown RBP5.62□□□□□ -1.51
SMC4-227ENST00000497984 MAPKAPK5Q8IW41 473 aa5.62□□□□□ -1.51
SMC4-227ENST00000497984 TMEM132CQ8N3T6 1108 aa5.62□□□□□ -1.51
SMC4-227ENST00000497984 UBXN4Q92575 508 aa5.62□□□□□ -1.51
SMC4-227ENST00000497984 SLC9A6Q92581 669 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms