RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 DUSP6Q16828 381 aa17.52■□□□□ 0.4
CTDSP1-214ENST00000497677 DCAF4L1Q3SXM0 396 aa17.52■□□□□ 0.4
CTDSP1-214ENST00000497677 PLPP4Q5VZY2 271 aa17.52■□□□□ 0.4
CTDSP1-214ENST00000497677 TMC7Q7Z402 723 aa17.52■□□□□ 0.4
CTDSP1-214ENST00000497677 VPS52Q8N1B4 723 aa17.52■□□□□ 0.4
CTDSP1-214ENST00000497677 VN1R2Q8NFZ6 395 aa17.52■□□□□ 0.4
CTDSP1-214ENST00000497677 GPT2Q8TD30 523 aa17.52■□□□□ 0.4
CTDSP1-214ENST00000497677 PPP2R3CQ969Q6 453 aa17.52■□□□□ 0.4
CTDSP1-214ENST00000497677 CHAMP1Q96JM3 812 aa17.52■□□□□ 0.4
CTDSP1-214ENST00000497677 FAM193BQ96PV7 902 aaPredicted RBP17.52■□□□□ 0.4
CTDSP1-214ENST00000497677 PANK2Q9BZ23 570 aa17.52■□□□□ 0.4
CTDSP1-214ENST00000497677 CDT1Q9H211 546 aa17.52■□□□□ 0.4
CTDSP1-214ENST00000497677 MYH15Q9Y2K3 1946 aa17.51■□□□□ 0.39
CTDSP1-214ENST00000497677 C2orf71A6NGG8 1288 aa17.51■□□□□ 0.39
CTDSP1-214ENST00000497677 TBX10O75333 385 aa17.51■□□□□ 0.39
CTDSP1-214ENST00000497677 LETM1O95202 739 aaPredicted RBP17.51■□□□□ 0.39
CTDSP1-214ENST00000497677 GLP2RO95838 553 aa17.51■□□□□ 0.39
CTDSP1-214ENST00000497677 TXLNAP40222 546 aa17.51■□□□□ 0.39
CTDSP1-214ENST00000497677 GRIK3Q13003 919 aa17.51■□□□□ 0.39
CTDSP1-214ENST00000497677 NAB2Q15742 525 aa17.51■□□□□ 0.39
CTDSP1-214ENST00000497677 SHC4Q6S5L8 630 aa17.51■□□□□ 0.39
CTDSP1-214ENST00000497677 HAUS6Q7Z4H7 955 aa17.51■□□□□ 0.39
CTDSP1-214ENST00000497677 MYCT1Q8N699 235 aa17.51■□□□□ 0.39
CTDSP1-214ENST00000497677 CEP120Q8N960 986 aa17.51■□□□□ 0.39
CTDSP1-214ENST00000497677 ADAMTS19Q8TE59 1207 aa17.51■□□□□ 0.39
CTDSP1-214ENST00000497677 ZBTB45Q96K62 511 aaPredicted RBP17.51■□□□□ 0.39
CTDSP1-214ENST00000497677 MSLNLQ96KJ4 702 aa17.51■□□□□ 0.39
CTDSP1-214ENST00000497677 ZBP1Q9H171 429 aa17.51■□□□□ 0.39
CTDSP1-214ENST00000497677 PARVGQ9HBI0 331 aa17.51■□□□□ 0.39
CTDSP1-214ENST00000497677 ENTPD7Q9NQZ7 604 aa17.51■□□□□ 0.39
CTDSP1-214ENST00000497677 CLEC1BQ9P126 229 aa17.51■□□□□ 0.39
CTDSP1-214ENST00000497677 TCHHQ07283 1943 aa17.51■□□□□ 0.39
CTDSP1-214ENST00000497677 MYMKA6NI61 221 aa17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 F8W810 466 aa17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 CUTAO60888 179 aa17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 FAM13AO94988 1023 aa17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 CXCL14O95715 111 aa17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 CTSAP10619 480 aa17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 GRM5P41594 1212 aa17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 RBM10P98175 930 aaKnown RBP17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 XKR4Q5GH76 650 aa17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 ALKAL1Q6UXT8 129 aa17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 ZPBP2Q6X784 338 aa17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 CCDC73Q6ZRK6 1079 aa17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 EP400NLQ6ZTU2 488 aa17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 RNF168Q8IYW5 571 aaPredicted RBP17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 DDX12PQ92771 950 aa17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 DNAJC19Q96DA6 116 aa17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 CDCA3Q99618 268 aaPredicted RBP17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 HAPLN2Q9GZV7 340 aa17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 GDAQ9Y2T3 454 aa17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 PRG3Q9Y2Y8 225 aaPredicted RBP17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 IRAK3Q9Y616 596 aa17.5■□□□□ 0.39
CTDSP1-214ENST00000497677 GRXCR2A6NFK2 248 aa17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 MEFVO15553 781 aaPredicted RBP17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 LILRB3O75022 631 aa17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 TOM1L1O75674 476 aa17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 KRT18P05783 430 aaKnown RBP17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 MCF2P10911 925 aa17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 OR1G1P47890 313 aa17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 STRN3Q13033 797 aa17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 SMC1AQ14683 1233 aaKnown RBP17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 E2F4Q16254 413 aa17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 ZNF568Q3ZCX4 644 aa17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 MPZL3Q6UWV2 235 aa17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 TMEM184AQ6ZMB5 413 aa17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 SV2BQ7L1I2 683 aa17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 TAS1R1Q7RTX1 841 aa17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 ZBTB33Q86T24 672 aa17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 AUTS2Q8WXX7 1259 aa17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 NECAB3Q96P71 396 aaPredicted RBP17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 CACNG4Q9UBN1 327 aa17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 TBX20Q9UMR3 447 aa17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 PCDHA7Q9UN72 937 aa17.49■□□□□ 0.39
CTDSP1-214ENST00000497677 PLXNA4Q9HCM2 1894 aa17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 A0A1W2PQ27 194 aa17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 A0A1W2PQ64 194 aa17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 A0A1W2PQD8 194 aa17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 H0YCG3 227 aa17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 GADD45BO75293 160 aaPredicted RBP17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 PIGRP01833 764 aa17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 THP07101 528 aa17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 NMT1P30419 496 aaKnown RBP17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 STAT6P42226 847 aa17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 ME1P48163 572 aa17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 GTF2BQ00403 316 aa17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 MCL1Q07820 350 aa17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 GSE1Q14687 1217 aa17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 ADALQ6DHV7 355 aa17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 PTCRAQ6ISU1 281 aaPredicted RBP17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 CAVIN1Q6NZI2 390 aaKnown RBP17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 DYMQ7RTS9 669 aa17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 APBB1IPQ7Z5R6 666 aaPredicted RBP17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 PDILTQ8N807 584 aa17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 RPS6KC1Q96S38 1066 aa17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 PAAF1Q9BRP4 392 aa17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 TCHPQ9BT92 498 aa17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 ST6GALNAC4Q9H4F1 302 aa17.48■□□□□ 0.39
CTDSP1-214ENST00000497677 ATG2AQ2TAZ0 1938 aa17.47■□□□□ 0.39
CTDSP1-214ENST00000497677 CUL9Q8IWT3 2517 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms