RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 SWSAP1Q6NVH7 229 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 GADL1Q6ZQY3 521 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 IFT81Q8WYA0 676 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 CEP170P1Q96L14 293 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 FGD4Q96M96 766 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 ALS2CR12Q96Q35 445 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 GPR88Q9GZN0 384 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 IQCGQ9H095 443 aaKnown RBP12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 LMCD1Q9NZU5 365 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 AJAP1Q9UKB5 411 aaPredicted RBP12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 PCDHGC5Q9Y5F6 944 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 TMEM150BA6NC51 233 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 F8VZ95 297 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 SLC16A4O15374 487 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 FAM153BP0C7A2 387 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 OSBPP22059 807 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 GARTP22102 1010 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 SOX5P35711 763 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 RFC5P40937 340 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 VAMP7P51809 220 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 CNTN2Q02246 1040 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 PRKG1Q13976 671 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 FAM153CQ494X1 144 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 CBWD6Q4V339 395 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 CBWD3Q5JTY5 395 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 CBWD5Q5RIA9 395 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 TCERG1LQ5VWI1 586 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 SMYD5Q6GMV2 418 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 GET4Q7L5D6 327 aaPredicted RBP12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 ARMC9Q7Z3E5 817 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 MMGT1Q8N4V1 131 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 BSNDQ8WZ55 320 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 OTUD5Q96G74 571 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 MFSD14AQ96MC6 490 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 SPAG5Q96R06 1193 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 DHX33Q9H6R0 707 aaKnown RBP12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 GPRC5CQ9NQ84 441 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 RBM12Q9NTZ6 932 aaKnown RBP12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 APEX2Q9UBZ4 518 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 FAM153AQ9UHL3 310 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 STYXL1Q9Y6J8 313 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 MYH10P35580 1976 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 A0A0A6YYK5 440 aaPredicted RBP12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 EME2A4GXA9 379 aaPredicted RBP12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 NDUFAB1O14561 156 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 FARP2O94887 1054 aaPredicted RBP12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 ATP4AP20648 1035 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 UBA1P22314 1058 aaKnown RBP12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 PTK2Q05397 1052 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 KIF22Q14807 665 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 TRADDQ15628 312 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 TARBP2Q15633 366 aaKnown RBP12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 BRDTQ58F21 947 aaPredicted RBP12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 ZNF571Q7Z3V5 609 aaPredicted RBP12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 SLC30A5Q8TAD4 765 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 CLMNQ96JQ2 1002 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 ZIM3Q96PE6 472 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 NOX5Q96PH1 765 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 RUFY1Q96T51 708 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 CBWD1Q9BRT8 395 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 MROH8Q9H579 483 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 KMT5AQ9NQR1 393 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 ZNF302Q9NR11 478 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 COQ4Q9Y3A0 265 aa12.46□□□□□ -0.41
SNRNP200-208ENST00000497539 A0A087X0T9 212 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 GLTPD2A6NH11 291 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 ZSCAN9O15535 394 aaPredicted RBP12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 FAM228BP0C875 321 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 CARSP49589 748 aaKnown RBP12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 GUCY2FP51841 1108 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 DLK2Q6UY11 383 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 MYLK4Q86YV6 388 aaPredicted RBP12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 SH3GL2Q99962 352 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 RBPJLQ9UBG7 517 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 NFU1Q9UMS0 254 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 ZNF236Q9UL36 1845 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 ZSWIM8A7E2V4 1837 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 GSTTP1A0A1W2PQM5 241 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 IQCA1LA6NCM1 817 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 MYO1FO00160 1098 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 LGR5O75473 907 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 GLI1P08151 1106 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 ADSSP30520 456 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 ARL2P36404 184 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 GUCY1A3Q02108 690 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 METTL7BQ6UX53 244 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 SNRNP27Q8WVK2 155 aaKnown RBP12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 RUBCNQ92622 972 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 FAM107BQ9H098 131 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 PORCNQ9H237 461 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 TAF1DQ9H5J8 278 aaPredicted RBP12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 STIM2Q9P246 746 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 SEPT9Q9UHD8 586 aaPredicted RBP12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 CAPN7Q9Y6W3 813 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 GOLGA8KD6RF30 607 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 CES2O00748 559 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 HSF2BPO75031 334 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 TCP1P17987 556 aaKnown RBP12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 CLDN10P78369 228 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 CETN1Q12798 172 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms