RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 FAM171A2A8MVW0 826 aa5.16□□□□□ -1.58
SMC4-225ENST00000497203 MTSS1O43312 755 aa5.16□□□□□ -1.58
SMC4-225ENST00000497203 SUV39H1O43463 412 aa5.16□□□□□ -1.58
SMC4-225ENST00000497203 AP1G1O43747 822 aa5.16□□□□□ -1.58
SMC4-225ENST00000497203 RPLP2P05387 115 aaKnown RBP5.16□□□□□ -1.58
SMC4-225ENST00000497203 PDCP20941 246 aa5.16□□□□□ -1.58
SMC4-225ENST00000497203 MCAMP43121 646 aa5.16□□□□□ -1.58
SMC4-225ENST00000497203 PRKD1Q15139 912 aaPredicted RBP5.16□□□□□ -1.58
SMC4-225ENST00000497203 ATAT1Q5SQI0 421 aa5.16□□□□□ -1.58
SMC4-225ENST00000497203 SPTY2D1Q68D10 685 aaPredicted RBP5.16□□□□□ -1.58
SMC4-225ENST00000497203 PPP4R3AQ6IN85 833 aa5.16□□□□□ -1.58
SMC4-225ENST00000497203 FAM111BQ6SJ93 734 aa5.16□□□□□ -1.58
SMC4-225ENST00000497203 USP45Q70EL2 814 aa5.16□□□□□ -1.58
SMC4-225ENST00000497203 SPRED1Q7Z699 444 aa5.16□□□□□ -1.58
SMC4-225ENST00000497203 GLB1L3Q8NCI6 653 aaPredicted RBP5.16□□□□□ -1.58
SMC4-225ENST00000497203 SH3RF3Q8TEJ3 882 aaPredicted RBP5.16□□□□□ -1.58
SMC4-225ENST00000497203 HPS3Q969F9 1004 aa5.16□□□□□ -1.58
SMC4-225ENST00000497203 HDAC10Q969S8 669 aa5.16□□□□□ -1.58
SMC4-225ENST00000497203 CDK5RAP1Q96SZ6 601 aaKnown RBP5.16□□□□□ -1.58
SMC4-225ENST00000497203 TCF25Q9BQ70 676 aa5.16□□□□□ -1.58
SMC4-225ENST00000497203 SLC12A5Q9H2X9 1139 aa5.16□□□□□ -1.58
SMC4-225ENST00000497203 TLR9Q9NR96 1032 aa5.16□□□□□ -1.58
SMC4-225ENST00000497203 SCOCQ9UIL1 159 aa5.16□□□□□ -1.58
SMC4-225ENST00000497203 DNM3Q9UQ16 869 aa5.16□□□□□ -1.58
SMC4-225ENST00000497203 CTNND1O60716 968 aaKnown RBP5.15□□□□□ -1.59
SMC4-225ENST00000497203 PHF2O75151 1096 aa5.15□□□□□ -1.59
SMC4-225ENST00000497203 TMEM127O75204 238 aa5.15□□□□□ -1.59
SMC4-225ENST00000497203 STC2O76061 302 aa5.15□□□□□ -1.59
SMC4-225ENST00000497203 LTA4HP09960 611 aaKnown RBP5.15□□□□□ -1.59
SMC4-225ENST00000497203 PURAQ00577 322 aaKnown RBP5.15□□□□□ -1.59
SMC4-225ENST00000497203 HDAC1Q13547 482 aaPredicted RBP5.15□□□□□ -1.59
SMC4-225ENST00000497203 PUM1Q14671 1186 aaKnown RBP eCLIP5.15□□□□□ -1.59
SMC4-225ENST00000497203 UBE3CQ15386 1083 aa5.15□□□□□ -1.59
SMC4-225ENST00000497203 B3GNT9Q6UX72 402 aa5.15□□□□□ -1.59
SMC4-225ENST00000497203 MIGA2Q7L4E1 593 aa5.15□□□□□ -1.59
SMC4-225ENST00000497203 TAS1R1Q7RTX1 841 aa5.15□□□□□ -1.59
SMC4-225ENST00000497203 CMTM4Q8IZR5 234 aa5.15□□□□□ -1.59
SMC4-225ENST00000497203 PRR18Q8N4B5 295 aa5.15□□□□□ -1.59
SMC4-225ENST00000497203 GPR156Q8NFN8 814 aa5.15□□□□□ -1.59
SMC4-225ENST00000497203 NRG4Q8WWG1 115 aa5.15□□□□□ -1.59
SMC4-225ENST00000497203 TTC17Q96AE7 1141 aa5.15□□□□□ -1.59
SMC4-225ENST00000497203 RUNDC1Q96C34 613 aa5.15□□□□□ -1.59
SMC4-225ENST00000497203 C1GALT1C1Q96EU7 318 aa5.15□□□□□ -1.59
SMC4-225ENST00000497203 MVB12AQ96EY5 273 aa5.15□□□□□ -1.59
SMC4-225ENST00000497203 FAM89AQ96GI7 184 aa5.15□□□□□ -1.59
SMC4-225ENST00000497203 FAM193BQ96PV7 902 aaPredicted RBP5.15□□□□□ -1.59
SMC4-225ENST00000497203 TAAR9Q96RI9 348 aa5.15□□□□□ -1.59
SMC4-225ENST00000497203 GTPBP4Q9BZE4 634 aaKnown RBP5.15□□□□□ -1.59
SMC4-225ENST00000497203 ARNT2Q9HBZ2 717 aa5.15□□□□□ -1.59
SMC4-225ENST00000497203 TESMINQ9Y4I5 508 aa5.15□□□□□ -1.59
SMC4-225ENST00000497203 RPTORQ8N122 1335 aa5.15□□□□□ -1.59
SMC4-225ENST00000497203 CCDC154A6NI56 674 aa5.14□□□□□ -1.59
SMC4-225ENST00000497203 HTRA2O43464 458 aaPredicted RBP5.14□□□□□ -1.59
SMC4-225ENST00000497203 MAP4K4O95819 1239 aaPredicted RBP5.14□□□□□ -1.59
SMC4-225ENST00000497203 GSPT1P15170 499 aaKnown RBP5.14□□□□□ -1.59
SMC4-225ENST00000497203 MGAT2Q10469 447 aa5.14□□□□□ -1.59
SMC4-225ENST00000497203 PGS1Q32NB8 556 aa5.14□□□□□ -1.59
SMC4-225ENST00000497203 THEMIS2Q5TEJ8 643 aa5.14□□□□□ -1.59
SMC4-225ENST00000497203 ABHD15Q6UXT9 468 aa5.14□□□□□ -1.59
SMC4-225ENST00000497203 CATIPQ7Z7H3 387 aa5.14□□□□□ -1.59
SMC4-225ENST00000497203 SGMS1Q86VZ5 419 aa5.14□□□□□ -1.59
SMC4-225ENST00000497203 GRAMD1CQ8IYS0 662 aa5.14□□□□□ -1.59
SMC4-225ENST00000497203 DIS3LQ8TF46 1054 aaKnown RBP5.14□□□□□ -1.59
SMC4-225ENST00000497203 RIN2Q8WYP3 895 aaPredicted RBP5.14□□□□□ -1.59
SMC4-225ENST00000497203 MPHOSPH9Q99550 1183 aa5.14□□□□□ -1.59
SMC4-225ENST00000497203 C7orf25Q9BPX7 421 aa5.14□□□□□ -1.59
SMC4-225ENST00000497203 ENKD1Q9H0I2 346 aa5.14□□□□□ -1.59
SMC4-225ENST00000497203 FAM204AQ9H8W3 233 aa5.14□□□□□ -1.59
SMC4-225ENST00000497203 MAN1C1Q9NR34 630 aa5.14□□□□□ -1.59
SMC4-225ENST00000497203 SLC52A1Q9NWF4 448 aa5.14□□□□□ -1.59
SMC4-225ENST00000497203 SERPINB13Q9UIV8 391 aa5.14□□□□□ -1.59
SMC4-225ENST00000497203 INTUQ9ULD6 942 aa5.14□□□□□ -1.59
SMC4-225ENST00000497203 CFAP20Q9Y6A4 193 aaKnown RBP5.14□□□□□ -1.59
SMC4-225ENST00000497203 FRMPD2Q68DX3 1309 aaPredicted RBP5.14□□□□□ -1.59
SMC4-225ENST00000497203 CAPN14A8MX76 684 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 H3BML4 177 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 PLSCR1O15162 318 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 MATN3O15232 486 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 AKAP8O43823 692 aaKnown RBP5.13□□□□□ -1.59
SMC4-225ENST00000497203 AKR1B10O60218 316 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 PRAMEF4O60810 478 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 ENDOD1O94919 500 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 HIBADHP31937 336 aaKnown RBP5.13□□□□□ -1.59
SMC4-225ENST00000497203 CASRP41180 1078 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 IL12RB1P42701 662 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 NPEPPSP55786 919 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 HHEXQ03014 270 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 ZNF267Q14586 743 aaPredicted RBP5.13□□□□□ -1.59
SMC4-225ENST00000497203 ELAVL1Q15717 326 aaKnown RBP5.13□□□□□ -1.59
SMC4-225ENST00000497203 FAM214AQ32MH5 1076 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 MAP9Q49MG5 647 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 C19orf54Q5BKX5 351 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 FKBP15Q5T1M5 1219 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 PPP4R4Q6NUP7 873 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 KSR2Q6VAB6 950 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 SRGAP1Q7Z6B7 1085 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 FBXO41Q8TF61 875 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 EXTL1Q92935 676 aa5.13□□□□□ -1.59
SMC4-225ENST00000497203 ZNF512Q96ME7 567 aaPredicted RBP5.13□□□□□ -1.59
SMC4-225ENST00000497203 KMT5AQ9NQR1 393 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms