RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, human

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS26A-208	ENST00000497022	ORAI2	Q96SN7	254 aa		4.6	□□□□□ -1.67
VPS26A-208	ENST00000497022	NDC1	Q9BTX1	674 aa		4.6	□□□□□ -1.67
VPS26A-208	ENST00000497022	KCNH6	Q9H252	994 aa		4.6	□□□□□ -1.67
VPS26A-208	ENST00000497022	GPRC5D	Q9NZD1	345 aa		4.6	□□□□□ -1.67
VPS26A-208	ENST00000497022	EIF2B4	Q9UI10	523 aa	Known RBP	4.6	□□□□□ -1.67
VPS26A-208	ENST00000497022	CLCA2	Q9UQC9	943 aa		4.6	□□□□□ -1.67
VPS26A-208	ENST00000497022	TBKBP1	A7MCY6	615 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	AHRR	A9YTQ3	701 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	PRR5-ARHGAP8	B1AHC4	643 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	PHF2	O75151	1096 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	CPE	P16870	476 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	CANX	P27824	592 aa	Known RBP	4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	APOBEC3A	P31941	199 aa	Predicted RBP	4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	CRHR1	P34998	444 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	SCAND1	P57086	179 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	TMPRSS15	P98073	1019 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	FAP	Q12884	760 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	HECTD2	Q5U5R9	776 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	ANKS6	Q68DC2	871 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	KCNV1	Q6PIU1	500 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	BTNL9	Q6UXG8	535 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	LHFPL2	Q6ZUX7	228 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	PDZD4	Q76G19	769 aa	Predicted RBP	4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	KCNK18	Q7Z418	384 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	GPR156	Q8NFN8	814 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	MDM1	Q8TC05	714 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	TSPEAR	Q8WU66	669 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	AUTS2	Q8WXX7	1259 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	RIN2	Q8WYP3	895 aa	Predicted RBP	4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	SPON1	Q9HCB6	807 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022	COX11	Q9Y6N1	276 aa		4.59	□□□□□ -1.67
VPS26A-208	ENST00000497022		B5MCH6	92 aa		4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	LEFTY2	O00292	366 aa		4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	AKR1B10	O60218	316 aa		4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	MTHFD2	P13995	350 aa		4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	ZFP36	P26651	326 aa	Known RBP	4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	ADSL	P30566	484 aa	Predicted RBP	4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	MUM1	Q2TAK8	710 aa		4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	MFSD14B	Q5SR56	506 aa		4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	PRAMEF14	Q5SWL7	426 aa		4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	PAPD7	Q5XG87	772 aa	Known RBP	4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	EGFLAM	Q63HQ2	1017 aa		4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	OLFML1	Q6UWY5	402 aa		4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	SYT12	Q8IV01	421 aa		4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	ZNF480	Q8WV37	535 aa		4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	FATE1	Q969F0	183 aa		4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	CEP95	Q96GE4	821 aa		4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	FAM193B	Q96PV7	902 aa	Predicted RBP	4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	DCLRE1C	Q96SD1	692 aa	Known RBP	4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	QRSL1	Q9H0R6	528 aa	Known RBP	4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	ZNF768	Q9H5H4	540 aa	Known RBP	4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	SYNPO2L	Q9H987	977 aa		4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	IFT122	Q9HBG6	1241 aa		4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	C14orf119	Q9NWQ9	140 aa		4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	SCOC	Q9UIL1	159 aa		4.58	□□□□□ -1.68
VPS26A-208	ENST00000497022	COL4A3	Q01955	1670 aa		4.57	□□□□□ -1.68
VPS26A-208	ENST00000497022	GPR39	O43194	453 aa		4.57	□□□□□ -1.68
VPS26A-208	ENST00000497022	ADCY6	O43306	1168 aa		4.57	□□□□□ -1.68
VPS26A-208	ENST00000497022	CNGA1	P29973	690 aa		4.57	□□□□□ -1.68
VPS26A-208	ENST00000497022	GPR3	P46089	330 aa		4.57	□□□□□ -1.68
VPS26A-208	ENST00000497022	FLT3LG	P49771	235 aa		4.57	□□□□□ -1.68
VPS26A-208	ENST00000497022	CCT2	P78371	535 aa	Known RBP	4.57	□□□□□ -1.68
VPS26A-208	ENST00000497022	FAM189B	P81408	668 aa		4.57	□□□□□ -1.68
VPS26A-208	ENST00000497022	ADRM1	Q16186	407 aa		4.57	□□□□□ -1.68
VPS26A-208	ENST00000497022	BMT2	Q1RMZ1	405 aa		4.57	□□□□□ -1.68
VPS26A-208	ENST00000497022	MST1L	Q2TV78	715 aa		4.57	□□□□□ -1.68
VPS26A-208	ENST00000497022	FAM47A	Q5JRC9	791 aa		4.57	□□□□□ -1.68
VPS26A-208	ENST00000497022	TOR2A	Q5JU69	321 aa		4.57	□□□□□ -1.68
VPS26A-208	ENST00000497022	EFCAB12	Q6NXP0	572 aa		4.57	□□□□□ -1.68
VPS26A-208	ENST00000497022		Q6ZVL8	140 aa		4.57	□□□□□ -1.68
VPS26A-208	ENST00000497022	WDR66	Q8TBY9	1149 aa		4.57	□□□□□ -1.68
VPS26A-208	ENST00000497022	AHCYL2	Q96HN2	611 aa	Known RBP	4.57	□□□□□ -1.68
VPS26A-208	ENST00000497022	SLC46A2	Q9BY10	475 aa		4.57	□□□□□ -1.68
VPS26A-208	ENST00000497022	TRPM5	Q9NZQ8	1165 aa		4.57	□□□□□ -1.68
VPS26A-208	ENST00000497022	KAT6A	Q92794	2004 aa		4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	PRKD3	O94806	890 aa		4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	RBP3	P10745	1247 aa		4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	LAG3	P18627	525 aa		4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	POU3F3	P20264	500 aa	Predicted RBP	4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	MGAT1	P26572	445 aa		4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	PTPN7	P35236	360 aa		4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	SRSF2	Q01130	221 aa	Known RBP	4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	NHLH2	Q02577	135 aa		4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	ANO4	Q32M45	955 aa		4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	TIGD2	Q4W5G0	525 aa		4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	RNF219	Q5W0B1	726 aa	Predicted RBP	4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	GDF7	Q7Z4P5	450 aa		4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	SPATS2	Q86XZ4	545 aa	Known RBP	4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	REPS2	Q8NFH8	660 aa		4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	OR7D4	Q8NG98	312 aa		4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	OR10H5	Q8NGA6	315 aa		4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	TFAP2C	Q92754	450 aa		4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	MYEOV	Q96EZ4	313 aa		4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	ACE2	Q9BYF1	805 aa	Predicted RBP	4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	GREM2	Q9H772	168 aa		4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	BCO1	Q9HAY6	547 aa		4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	POGK	Q9P215	609 aa		4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	PRKAB1	Q9Y478	270 aa		4.56	□□□□□ -1.68
VPS26A-208	ENST00000497022	CHST2	Q9Y4C5	530 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms