RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 DR1Q01658 176 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 CYP4A11Q02928 519 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 CYP4F3Q08477 520 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 FAPQ12884 760 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 GFOD2Q3B7J2 385 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 METTL11BQ5VVY1 283 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 CREB3L3Q68CJ9 461 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 FAM180BQ6P0A1 224 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 KRT26Q7Z3Y9 468 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 ZNF605Q86T29 641 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 FBXO18Q8NFZ0 1043 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 CHAC2Q8WUX2 184 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 MISP3Q96FF7 219 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 KIRREL1Q96J84 757 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 COG8Q96MW5 612 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 ASPNQ9BXN1 380 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 BICC1Q9H694 974 aaKnown RBP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 ATP6V0A4Q9HBG4 840 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 FKBP14Q9NWM8 211 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 SLC5A4Q9NY91 659 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 CGGBP1Q9UFW8 167 aaPredicted RBP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 FBXL7Q9UJT9 491 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 KCNH3Q9ULD8 1083 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 SIT1Q9Y3P8 196 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 EPN1Q9Y6I3 576 aaPredicted RBP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 SLC4A4Q9Y6R1 1079 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 ARNTLO00327 626 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 MCF2LO15068 1137 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 PLSCR1O15162 318 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 XPOTO43592 962 aaKnown RBP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 TMCC2O75069 709 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 GJB6O95452 261 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 ASMTLO95671 621 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 TROVE2P10155 538 aaKnown RBP eCLIP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 IDO1P14902 403 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 RTP1P59025 263 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 PIN1Q13526 163 aaPredicted RBP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 TRIM14Q14142 442 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 KRT71Q3SY84 523 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 CCDC14Q49A88 953 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 VPS53Q5VIR6 699 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 ADALQ6DHV7 355 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 MZT2BQ6NZ67 158 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 CORO6Q6QEF8 472 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 SPATC1Q76KD6 591 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 CENPQQ7L2Z9 268 aaPredicted RBP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 RNF10Q8N5U6 811 aaKnown RBP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 MDM1Q8TC05 714 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 PIWIL2Q8TC59 973 aaKnown RBP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 STON2Q8WXE9 905 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 MYLIPQ8WY64 445 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 ATP6V0A1Q93050 837 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 SHISA4Q96DD7 197 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 TBATAQ96M53 351 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 C16orf45Q96MC5 204 aaPredicted RBP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 OSBPL9Q96SU4 736 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 RTFDC1Q9BY42 306 aaPredicted RBP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 ASPSCR1Q9BZE9 553 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 FAM107BQ9H098 131 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 KLHL25Q9H0H3 589 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 CDH19Q9H159 772 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 ASCC2Q9H1I8 757 aaPredicted RBP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 NSUN3Q9H649 340 aaKnown RBP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 ZCCHC17Q9NP64 241 aaKnown RBP3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 SMYD2Q9NRG4 433 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 ATP8A2Q9NTI2 1148 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 TMEM260Q9NX78 707 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 FAM53CQ9NYF3 392 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 IMPACTQ9P2X3 320 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 GULP1Q9UBP9 304 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 ZNF180Q9UJW8 692 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 ATP11BQ9Y2G3 1177 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 RWDD3Q9Y3V2 267 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 TIMM22Q9Y584 194 aa3.39□□□□□ -1.87
SNRNP48-202ENST00000496946 SYNJ2BP-COX16A0A087WUM0 186 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 hCG_1642624A0A1W2PR95 340 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 GOLGA6L9A6NEM1 432 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 NUDT19A8MXV4 375 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 LACTBL1A8MY62 500 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 M0R2C6 588 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 IRS4O14654 1257 aaPredicted RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 NDC80O14777 642 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 CTIFO43310 598 aaKnown RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 TMEM127O75204 238 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 FESP07332 822 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 PARP1P09874 1014 aaKnown RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 IFIT1P09914 478 aaKnown RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 PCNAP12004 261 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 SCG2P13521 617 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 ITGB5P18084 799 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 ATP5JP18859 108 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 STAT3P40763 770 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 GCLCP48506 637 aaPredicted RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 MCM2P49736 904 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 KRT83P78385 493 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 CD83Q01151 205 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 APBA1Q02410 837 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 RELQ04864 619 aaPredicted RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 ITKQ08881 620 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms