RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 ADPGKQ9BRR6 497 aa16.62■□□□□ 0.25
NEK4-206ENST00000496822 SFXN1Q9H9B4 322 aa16.62■□□□□ 0.25
NEK4-206ENST00000496822 CHST7Q9NS84 486 aa16.62■□□□□ 0.25
NEK4-206ENST00000496822 ADAM28Q9UKQ2 775 aa16.62■□□□□ 0.25
NEK4-206ENST00000496822 GDAQ9Y2T3 454 aa16.62■□□□□ 0.25
NEK4-206ENST00000496822 PHLPP2Q6ZVD8 1323 aa16.62■□□□□ 0.25
NEK4-206ENST00000496822 PLXNA3P51805 1871 aa16.61■□□□□ 0.25
NEK4-206ENST00000496822 VWA3AA6NCI4 1184 aa16.61■□□□□ 0.25
NEK4-206ENST00000496822 TMEM221A6NGB7 291 aa16.61■□□□□ 0.25
NEK4-206ENST00000496822 CCDC169A6NNP5 214 aa16.61■□□□□ 0.25
NEK4-206ENST00000496822 M0R296 226 aa16.61■□□□□ 0.25
NEK4-206ENST00000496822 KIF4AO95239 1232 aa16.61■□□□□ 0.25
NEK4-206ENST00000496822 EFNA5P52803 228 aa16.61■□□□□ 0.25
NEK4-206ENST00000496822 TUSC3Q13454 348 aa16.61■□□□□ 0.25
NEK4-206ENST00000496822 HSP90AA2PQ14568 343 aaPredicted RBP16.61■□□□□ 0.25
NEK4-206ENST00000496822 DCAF4L1Q3SXM0 396 aa16.61■□□□□ 0.25
NEK4-206ENST00000496822 HYIQ5T013 277 aa16.61■□□□□ 0.25
NEK4-206ENST00000496822 ATF7IP2Q5U623 682 aa16.61■□□□□ 0.25
NEK4-206ENST00000496822 FAM122AQ96E09 287 aa16.61■□□□□ 0.25
NEK4-206ENST00000496822 RXFP1Q9HBX9 757 aa16.61■□□□□ 0.25
NEK4-206ENST00000496822 MAN1C1Q9NR34 630 aa16.61■□□□□ 0.25
NEK4-206ENST00000496822 NR2E1Q9Y466 385 aa16.61■□□□□ 0.25
NEK4-206ENST00000496822 ARIH1Q9Y4X5 557 aaPredicted RBP16.61■□□□□ 0.25
NEK4-206ENST00000496822 DENND4AQ7Z401 1863 aa16.61■□□□□ 0.25
NEK4-206ENST00000496822 SPDYE4A6NLX3 237 aa16.6■□□□□ 0.25
NEK4-206ENST00000496822 SFI1A8K8P3 1242 aa16.6■□□□□ 0.25
NEK4-206ENST00000496822 ADH1AP07327 375 aa16.6■□□□□ 0.25
NEK4-206ENST00000496822 RAD51AP2Q09MP3 1159 aa16.6■□□□□ 0.25
NEK4-206ENST00000496822 DMP1Q13316 513 aaPredicted RBP16.6■□□□□ 0.25
NEK4-206ENST00000496822 GLRA4Q5JXX5 417 aa16.6■□□□□ 0.25
NEK4-206ENST00000496822 ATAT1Q5SQI0 421 aa16.6■□□□□ 0.25
NEK4-206ENST00000496822 GPR149Q86SP6 731 aa16.6■□□□□ 0.25
NEK4-206ENST00000496822 CEP120Q8N960 986 aa16.6■□□□□ 0.25
NEK4-206ENST00000496822 ARHGAP28Q9P2N2 729 aa16.6■□□□□ 0.25
NEK4-206ENST00000496822 TNFSF13BQ9Y275 285 aa16.6■□□□□ 0.25
NEK4-206ENST00000496822 SSX2IPQ9Y2D8 614 aa16.6■□□□□ 0.25
NEK4-206ENST00000496822 K7ERI5 159 aa16.59■□□□□ 0.25
NEK4-206ENST00000496822 TADA2AO75478 443 aa16.59■□□□□ 0.25
NEK4-206ENST00000496822 GLUD1P00367 558 aa16.59■□□□□ 0.25
NEK4-206ENST00000496822 THP07101 528 aa16.59■□□□□ 0.25
NEK4-206ENST00000496822 SPATA31D3P0C874 917 aa16.59■□□□□ 0.25
NEK4-206ENST00000496822 RPL17P18621 184 aaKnown RBP16.59■□□□□ 0.25
NEK4-206ENST00000496822 IGFBP6P24592 240 aaPredicted RBP16.59■□□□□ 0.25
NEK4-206ENST00000496822 USP41Q3LFD5 358 aa16.59■□□□□ 0.25
NEK4-206ENST00000496822 TMEM119Q4V9L6 283 aa16.59■□□□□ 0.25
NEK4-206ENST00000496822 RTP2Q5QGT7 225 aa16.59■□□□□ 0.25
NEK4-206ENST00000496822 LARP1BQ659C4 914 aaKnown RBP16.59■□□□□ 0.25
NEK4-206ENST00000496822 PRSS55Q6UWB4 352 aaPredicted RBP16.59■□□□□ 0.25
NEK4-206ENST00000496822 SPATA31D4Q6ZUB0 917 aa16.59■□□□□ 0.25
NEK4-206ENST00000496822 ZBTB33Q86T24 672 aa16.59■□□□□ 0.25
NEK4-206ENST00000496822 GLYCTKQ8IVS8 523 aa16.59■□□□□ 0.25
NEK4-206ENST00000496822 TDRD5Q8NAT2 981 aaKnown RBP16.59■□□□□ 0.25
NEK4-206ENST00000496822 LRRC15Q8TF66 581 aa16.59■□□□□ 0.25
NEK4-206ENST00000496822 RIN2Q8WYP3 895 aaPredicted RBP16.59■□□□□ 0.25
NEK4-206ENST00000496822 ASIC4Q96FT7 647 aa16.59■□□□□ 0.25
NEK4-206ENST00000496822 DRC1Q96MC2 740 aa16.59■□□□□ 0.25
NEK4-206ENST00000496822 ACO2Q99798 780 aaKnown RBP16.59■□□□□ 0.25
NEK4-206ENST00000496822 TARS2Q9BW92 718 aaKnown RBP16.59■□□□□ 0.25
NEK4-206ENST00000496822 CDT1Q9H211 546 aa16.59■□□□□ 0.25
NEK4-206ENST00000496822 SMOC2Q9H3U7 446 aa16.59■□□□□ 0.25
NEK4-206ENST00000496822 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.59■□□□□ 0.25
NEK4-206ENST00000496822 SF3B1O75533 1304 aaKnown RBP eCLIP16.59■□□□□ 0.25
NEK4-206ENST00000496822 ABLIM1O14639 778 aa16.58■□□□□ 0.24
NEK4-206ENST00000496822 SLC16A4O15374 487 aa16.58■□□□□ 0.24
NEK4-206ENST00000496822 RFPL2O75678 378 aa16.58■□□□□ 0.24
NEK4-206ENST00000496822 ASGR2P07307 311 aa16.58■□□□□ 0.24
NEK4-206ENST00000496822 GUCY2CP25092 1073 aa16.58■□□□□ 0.24
NEK4-206ENST00000496822 SLC12A3P55017 1021 aa16.58■□□□□ 0.24
NEK4-206ENST00000496822 CACNB1Q02641 598 aaPredicted RBP16.58■□□□□ 0.24
NEK4-206ENST00000496822 SIGLEC14Q08ET2 396 aa16.58■□□□□ 0.24
NEK4-206ENST00000496822 CUL4AQ13619 759 aa16.58■□□□□ 0.24
NEK4-206ENST00000496822 ZNF568Q3ZCX4 644 aa16.58■□□□□ 0.24
NEK4-206ENST00000496822 ARL6IP4Q66PJ3 421 aaKnown RBP16.58■□□□□ 0.24
NEK4-206ENST00000496822 PALB2Q86YC2 1186 aa16.58■□□□□ 0.24
NEK4-206ENST00000496822 KREMEN2Q8NCW0 462 aa16.58■□□□□ 0.24
NEK4-206ENST00000496822 PPP1R10Q96QC0 940 aaKnown RBP16.58■□□□□ 0.24
NEK4-206ENST00000496822 BACH2Q9BYV9 841 aa16.58■□□□□ 0.24
NEK4-206ENST00000496822 TMEM134Q9H6X4 195 aa16.58■□□□□ 0.24
NEK4-206ENST00000496822 GOLGA2P5Q9HBQ8 144 aa16.58■□□□□ 0.24
NEK4-206ENST00000496822 PTPRHQ9HD43 1115 aa16.58■□□□□ 0.24
NEK4-206ENST00000496822 KMT5AQ9NQR1 393 aa16.58■□□□□ 0.24
NEK4-206ENST00000496822 MUC6Q6W4X9 2439 aa16.57■□□□□ 0.24
NEK4-206ENST00000496822 C2orf16Q68DN1 1984 aa16.57■□□□□ 0.24
NEK4-206ENST00000496822 NPHP3-ACAD11A0A0J9YXS1 232 aa16.57■□□□□ 0.24
NEK4-206ENST00000496822 TGM5O43548 720 aa16.57■□□□□ 0.24
NEK4-206ENST00000496822 BRD1O95696 1058 aa16.57■□□□□ 0.24
NEK4-206ENST00000496822 GRM5P41594 1212 aa16.57■□□□□ 0.24
NEK4-206ENST00000496822 OSTNP61366 133 aa16.57■□□□□ 0.24
NEK4-206ENST00000496822 GRIN1Q05586 938 aa16.57■□□□□ 0.24
NEK4-206ENST00000496822 C15orf39Q6ZRI6 1047 aa16.57■□□□□ 0.24
NEK4-206ENST00000496822 CCDC149Q6ZUS6 474 aa16.57■□□□□ 0.24
NEK4-206ENST00000496822 BMP8AQ7Z5Y6 402 aa16.57■□□□□ 0.24
NEK4-206ENST00000496822 SYT2Q8N9I0 419 aaPredicted RBP16.57■□□□□ 0.24
NEK4-206ENST00000496822 CMASQ8NFW8 434 aaPredicted RBP16.57■□□□□ 0.24
NEK4-206ENST00000496822 PBXIP1Q96AQ6 731 aa16.57■□□□□ 0.24
NEK4-206ENST00000496822 MFSD14AQ96MC6 490 aa16.57■□□□□ 0.24
NEK4-206ENST00000496822 MRPL4Q9BYD3 311 aaKnown RBP16.57■□□□□ 0.24
NEK4-206ENST00000496822 NT5C3AQ9H0P0 336 aa16.57■□□□□ 0.24
NEK4-206ENST00000496822 ZNF318Q5VUA4 2279 aa16.56■□□□□ 0.24
NEK4-206ENST00000496822 CCDC195A0A1B0GUA6 201 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms