RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 STRA6Q9BX79 667 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 NKX2-4Q9H2Z4 354 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 PTPRHQ9HD43 1115 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 SNTG2Q9NY99 539 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 AGO2Q9UKV8 859 aaKnown RBP10.56□□□□□ -0.72
PRPF3-207ENST00000496202 YBX2Q9Y2T7 364 aaKnown RBP10.56□□□□□ -0.72
PRPF3-207ENST00000496202 GIT1Q9Y2X7 761 aa10.56□□□□□ -0.72
PRPF3-207ENST00000496202 COL4A6Q14031 1691 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 A0A0B4J269 797 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 MEIS3P2A8K0S8 358 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 TISP43B9A030 160 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 BIN1O00499 593 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 ABLIM1O14639 778 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 CLTAP09496 248 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 GARTP22102 1010 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 AKAP5P24588 427 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 MLH1P40692 756 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 KNOP1Q1ED39 458 aaKnown RBP10.55□□□□□ -0.72
PRPF3-207ENST00000496202 BMT2Q1RMZ1 405 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 ZNF658Q5TYW1 1059 aaPredicted RBP10.55□□□□□ -0.72
PRPF3-207ENST00000496202 SLC39A4Q6P5W5 647 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 AGMOQ6ZNB7 445 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 CRIPAKQ8N1N5 446 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 GPT2Q8TD30 523 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 SYAP1Q96A49 352 aaPredicted RBP10.55□□□□□ -0.72
PRPF3-207ENST00000496202 FAM193BQ96PV7 902 aaPredicted RBP10.55□□□□□ -0.72
PRPF3-207ENST00000496202 GAD1Q99259 594 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 IKZF4Q9H2S9 585 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 RNF19AQ9NV58 838 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 KLK14Q9P0G3 267 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 CGNQ9P2M7 1197 aaKnown RBP10.55□□□□□ -0.72
PRPF3-207ENST00000496202 KANSL3Q9P2N6 904 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 MAN1B1Q9UKM7 699 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 RWDD3Q9Y3V2 267 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 RALGAPA2Q2PPJ7 1873 aa10.55□□□□□ -0.72
PRPF3-207ENST00000496202 KIAA1671Q9BY89 1806 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 TMEM265A0A087WTH1 108 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 LCHNA4D1U4 455 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 ARL5CA6NH57 179 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 KIAA0391O15091 583 aaKnown RBP10.54□□□□□ -0.72
PRPF3-207ENST00000496202 OFD1O75665 1012 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 ZMYND10O75800 440 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 CTNNB1P35222 781 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 PPP1R2P41236 205 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 CYP2J2P51589 502 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 SNRPFP62306 86 aaKnown RBP10.54□□□□□ -0.72
PRPF3-207ENST00000496202 PPP2R3AQ06190 1150 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 ZNF697Q5TEC3 545 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 SMYD4Q8IYR2 804 aaPredicted RBP10.54□□□□□ -0.72
PRPF3-207ENST00000496202 GUF1Q8N442 669 aaKnown RBP10.54□□□□□ -0.72
PRPF3-207ENST00000496202 CEP120Q8N960 986 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 SPATA20Q8TB22 786 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 SP7Q8TDD2 431 aaPredicted RBP10.54□□□□□ -0.72
PRPF3-207ENST00000496202 ZNF689Q96CS4 500 aaPredicted RBP10.54□□□□□ -0.72
PRPF3-207ENST00000496202 LRCH3Q96II8 777 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 ZFP42Q96MM3 310 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 SAMD11Q96NU1 681 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 CASD1Q96PB1 797 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 TGS1Q96RS0 853 aaKnown RBP10.54□□□□□ -0.72
PRPF3-207ENST00000496202 FAM213AQ9BRX8 229 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 PCIF1Q9H4Z3 704 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 RPF1Q9H9Y2 349 aaKnown RBP10.54□□□□□ -0.72
PRPF3-207ENST00000496202 RC3H2Q9HBD1 1191 aaKnown RBP10.54□□□□□ -0.72
PRPF3-207ENST00000496202 AAASQ9NRG9 546 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 AGPAT3Q9NRZ7 376 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 TYW1Q9NV66 732 aaKnown RBP10.54□□□□□ -0.72
PRPF3-207ENST00000496202 KIAA1468Q9P260 1216 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 MAPK8IP1Q9UQF2 711 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 MRPL42Q9Y6G3 142 aaKnown RBP10.54□□□□□ -0.72
PRPF3-207ENST00000496202 STYXL1Q9Y6J8 313 aa10.54□□□□□ -0.72
PRPF3-207ENST00000496202 LAMA3Q16787 3333 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 LINC01553A4QN01 128 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 CARNS1A5YM72 827 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 SOX1O00570 391 aaPredicted RBP10.53□□□□□ -0.72
PRPF3-207ENST00000496202 PDXKO00764 312 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 PSMA7O14818 248 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 CALUO43852 315 aaPredicted RBP10.53□□□□□ -0.72
PRPF3-207ENST00000496202 ZC3H11AO75152 810 aaKnown RBP eCLIP10.53□□□□□ -0.72
PRPF3-207ENST00000496202 LDHAP00338 332 aaKnown RBP10.53□□□□□ -0.72
PRPF3-207ENST00000496202 POMCP01189 267 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 CXCL8P10145 99 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 LAG3P18627 525 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 HOXD13P35453 343 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 ACOT2P49753 483 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 SCNN1GP51170 649 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 GRIK3Q13003 919 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 SEZ6Q53EL9 994 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 CCDC183Q5T5S1 534 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 ISM2Q6H9L7 571 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 TRIML1Q8N9V2 468 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 FBXO22Q8NEZ5 403 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 SAAL1Q96ER3 474 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 SNX27Q96L92 541 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 ZNF558Q96NG5 402 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 TSG101Q99816 390 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 CBWD1Q9BRT8 395 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 HAPLN2Q9GZV7 340 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 ZMYND15Q9H091 742 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 TBC1D13Q9NVG8 400 aa10.53□□□□□ -0.72
PRPF3-207ENST00000496202 HSPBP1Q9NZL4 362 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms