RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	KANSL3	Q9P2N6	904 aa		10.76	□□□□□ -0.69
CALD1-223	ENST00000496024	HPSE	Q9Y251	543 aa		10.76	□□□□□ -0.69
CALD1-223	ENST00000496024	PRG3	Q9Y2Y8	225 aa	Predicted RBP	10.76	□□□□□ -0.69
CALD1-223	ENST00000496024	EYS	Q5T1H1	3165 aa		10.76	□□□□□ -0.69
CALD1-223	ENST00000496024	REV3L	O60673	3130 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	FRMD3	A2A2Y4	597 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	TISP43	B9A030	160 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	ANKRD63	C9JTQ0	380 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	TULP1	O00294	542 aa	Predicted RBP	10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	ABLIM1	O14639	778 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	GALT	P07902	379 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	MCF2	P10911	925 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	PROZ	P22891	400 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	GRM5	P41594	1212 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	OR1G1	P47890	313 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	SLC11A1	P49279	550 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	CASP5	P51878	434 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	YARS	P54577	528 aa	Known RBP	10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	GTF2B	Q00403	316 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	KCNA1	Q09470	495 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	GLRA4	Q5JXX5	417 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	SLC39A4	Q6P5W5	647 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	ZPBP2	Q6X784	338 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	SYCP3	Q8IZU3	236 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	SLC39A11	Q8N1S5	342 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	SLC17A8	Q8NDX2	589 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	GLIS3	Q8NEA6	775 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	MICAL1	Q8TDZ2	1067 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	MRPL38	Q96DV4	380 aa	Known RBP	10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	PAGE5	Q96GU1	130 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	HAPLN2	Q9GZV7	340 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	PRDM6	Q9NQX0	595 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	SPG21	Q9NZD8	308 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	CACNG4	Q9UBN1	327 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	PCDHGC5	Q9Y5F6	944 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	ATG2A	Q2TAZ0	1938 aa		10.75	□□□□□ -0.69
CALD1-223	ENST00000496024	PTGES	O14684	152 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	PRPF6	O94906	941 aa	Known RBP	10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	ZNF202	O95125	648 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	PIGR	P01833	764 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	ALDH2	P05091	517 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	CA8	P35219	290 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	IRS1	P35568	1242 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	PPM1A	P35813	382 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	KRT17	Q04695	432 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	MCL1	Q07820	350 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	CSPP1	Q1MSJ5	1256 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	TCEAL5	Q5H9L2	206 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	FAM26F	Q5R3K3	315 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	ZBTB41	Q5SVQ8	909 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	L1TD1	Q5T7N2	865 aa	Known RBP	10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	PLPP4	Q5VZY2	271 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	UNC13D	Q70J99	1090 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	TMEM173	Q86WV6	379 aa	Predicted RBP	10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	MAP4K3	Q8IVH8	894 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	GSTCD	Q8NEC7	633 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	BCL7C	Q8WUZ0	217 aa	Predicted RBP	10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	RSPH1	Q8WYR4	309 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	TMEM169	Q96HH4	297 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	ACAP3	Q96P50	834 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	ACCS	Q96QU6	501 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	MSTO1	Q9BUK6	570 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	ST6GALNAC4	Q9H4F1	302 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	OLFML3	Q9NRN5	406 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	LMCD1	Q9NZU5	365 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	USP25	Q9UHP3	1055 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	PUF60	Q9UHX1	559 aa	Known RBP	10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	FAN1	Q9Y2M0	1017 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	PCDHB13	Q9Y5F0	798 aa		10.74	□□□□□ -0.69
CALD1-223	ENST00000496024	FAM237A	A0A1B0GTK4	181 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	CASTOR2	A6NHX0	329 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024		F8W810	466 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	NRP1	O14786	923 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	INPPL1	O15357	1258 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	GADD45B	O75293	160 aa	Predicted RBP	10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	PPP1R37	O75864	691 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	TH	P07101	528 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	PRR29	P0C7W0	189 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	POU3F3	P20264	500 aa	Predicted RBP	10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	SCP2	P22307	547 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	ABCD1	P33897	745 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	TNFSF9	P41273	254 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	ACOT2	P49753	483 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	ERVFC1	P60507	584 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	SPAG1	Q07617	926 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	GRIK3	Q13003	919 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	CAMK1	Q14012	370 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	CNNM4	Q6P4Q7	775 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	KRBA2	Q6ZNG9	492 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	EP400NL	Q6ZTU2	488 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	COLGALT2	Q8IYK4	626 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	NOC3L	Q8WTT2	800 aa	Known RBP	10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	HVCN1	Q96D96	273 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	FAM212A	Q96EL1	285 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	IGSF21	Q96ID5	467 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	STRA6	Q9BX79	667 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	LMAN2L	Q9H0V9	348 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	IGFLR1	Q9H665	355 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	SLC39A2	Q9NP94	309 aa		10.73	□□□□□ -0.69
CALD1-223	ENST00000496024	ENTPD7	Q9NQZ7	604 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms