RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 ZNF200P98182 395 aaPredicted RBP26.44■■□□□ 1.82
PPP1R3F-205ENST00000495799 CDK17Q00537 523 aa26.44■■□□□ 1.82
PPP1R3F-205ENST00000495799 MEA1Q16626 185 aa26.44■■□□□ 1.82
PPP1R3F-205ENST00000495799 PDXDC1Q6P996 788 aa26.44■■□□□ 1.82
PPP1R3F-205ENST00000495799 RRAGAQ7L523 313 aa26.44■■□□□ 1.82
PPP1R3F-205ENST00000495799 FMNL3Q8IVF7 1028 aa26.44■■□□□ 1.82
PPP1R3F-205ENST00000495799 BAP1Q92560 729 aa26.44■■□□□ 1.82
PPP1R3F-205ENST00000495799 VTI1AQ96AJ9 217 aa26.44■■□□□ 1.82
PPP1R3F-205ENST00000495799 WBP1LQ9NX94 342 aa26.44■■□□□ 1.82
PPP1R3F-205ENST00000495799 PLAGL2Q9UPG8 496 aa26.44■■□□□ 1.82
PPP1R3F-205ENST00000495799 TSPAN1O60635 241 aa26.44■■□□□ 1.82
PPP1R3F-205ENST00000495799 AXLP30530 894 aa26.44■■□□□ 1.82
PPP1R3F-205ENST00000495799 TMEM62Q0P6H9 643 aa26.44■■□□□ 1.82
PPP1R3F-205ENST00000495799 EPC2Q52LR7 807 aa26.44■■□□□ 1.82
PPP1R3F-205ENST00000495799 ARRDC4Q8NCT1 418 aa26.44■■□□□ 1.82
PPP1R3F-205ENST00000495799 CGRRF1Q99675 332 aa26.44■■□□□ 1.82
PPP1R3F-205ENST00000495799 CDT1Q9H211 546 aa26.44■■□□□ 1.82
PPP1R3F-205ENST00000495799 KCND1Q9NSA2 647 aa26.44■■□□□ 1.82
PPP1R3F-205ENST00000495799 GINS2Q9Y248 185 aa26.44■■□□□ 1.82
PPP1R3F-205ENST00000495799 TRIP12Q14669 1992 aaPredicted RBP26.43■■□□□ 1.82
PPP1R3F-205ENST00000495799 TULP1O00294 542 aaPredicted RBP26.43■■□□□ 1.82
PPP1R3F-205ENST00000495799 FAM189A1O60320 539 aa26.43■■□□□ 1.82
PPP1R3F-205ENST00000495799 ARF4P18085 180 aaPredicted RBP26.43■■□□□ 1.82
PPP1R3F-205ENST00000495799 EIF4BP23588 611 aaKnown RBP26.43■■□□□ 1.82
PPP1R3F-205ENST00000495799 ACLYP53396 1101 aa26.43■■□□□ 1.82
PPP1R3F-205ENST00000495799 GDF6Q6KF10 455 aaPredicted RBP26.43■■□□□ 1.82
PPP1R3F-205ENST00000495799 CATSPER4Q7RTX7 472 aa26.43■■□□□ 1.82
PPP1R3F-205ENST00000495799 GLT1D1Q96MS3 346 aa26.43■■□□□ 1.82
PPP1R3F-205ENST00000495799 SPAG5Q96R06 1193 aa26.43■■□□□ 1.82
PPP1R3F-205ENST00000495799 OSMRQ99650 979 aa26.43■■□□□ 1.82
PPP1R3F-205ENST00000495799 PDZD7Q9H5P4 517 aa26.43■■□□□ 1.82
PPP1R3F-205ENST00000495799 SIX2Q9NPC8 291 aa26.43■■□□□ 1.82
PPP1R3F-205ENST00000495799 NLRC4Q9NPP4 1024 aa26.43■■□□□ 1.82
PPP1R3F-205ENST00000495799 CPSF3Q9UKF6 684 aaKnown RBP26.43■■□□□ 1.82
PPP1R3F-205ENST00000495799 PTPN22Q9Y2R2 807 aa26.43■■□□□ 1.82
PPP1R3F-205ENST00000495799 COQ4Q9Y3A0 265 aa26.43■■□□□ 1.82
PPP1R3F-205ENST00000495799 LRRC53A6NM62 1247 aa26.42■■□□□ 1.82
PPP1R3F-205ENST00000495799 ACTN1P12814 892 aa26.42■■□□□ 1.82
PPP1R3F-205ENST00000495799 TNNI1P19237 187 aa26.42■■□□□ 1.82
PPP1R3F-205ENST00000495799 DCAF4L1Q3SXM0 396 aa26.42■■□□□ 1.82
PPP1R3F-205ENST00000495799 SFMBT2Q5VUG0 894 aa26.42■■□□□ 1.82
PPP1R3F-205ENST00000495799 EEF1DP3Q658K8 133 aa26.42■■□□□ 1.82
PPP1R3F-205ENST00000495799 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.42■■□□□ 1.82
PPP1R3F-205ENST00000495799 APEX2Q9UBZ4 518 aa26.42■■□□□ 1.82
PPP1R3F-205ENST00000495799 ZSCAN12O43309 604 aa26.41■■□□□ 1.82
PPP1R3F-205ENST00000495799 CSDE1O75534 798 aaKnown RBP26.41■■□□□ 1.82
PPP1R3F-205ENST00000495799 IL18RAPO95256 599 aa26.41■■□□□ 1.82
PPP1R3F-205ENST00000495799 LHX8Q68G74 356 aa26.41■■□□□ 1.82
PPP1R3F-205ENST00000495799 DPY19L2P1Q6NXN4 242 aa26.41■■□□□ 1.82
PPP1R3F-205ENST00000495799 RPAINQ86UA6 219 aa26.41■■□□□ 1.82
PPP1R3F-205ENST00000495799 SERINC5Q86VE9 423 aa26.41■■□□□ 1.82
PPP1R3F-205ENST00000495799 FBXL13Q8NEE6 735 aa26.41■■□□□ 1.82
PPP1R3F-205ENST00000495799 RPF1Q9H9Y2 349 aaKnown RBP26.41■■□□□ 1.82
PPP1R3F-205ENST00000495799 A0A1B0GUA9 196 aa26.4■■□□□ 1.82
PPP1R3F-205ENST00000495799 CLTAP09496 248 aa26.4■■□□□ 1.82
PPP1R3F-205ENST00000495799 C1QTNF8P60827 252 aa26.4■■□□□ 1.82
PPP1R3F-205ENST00000495799 MRPS6P82932 125 aaKnown RBP26.4■■□□□ 1.82
PPP1R3F-205ENST00000495799 ITGA7Q13683 1181 aa26.4■■□□□ 1.82
PPP1R3F-205ENST00000495799 SNX17Q15036 470 aa26.4■■□□□ 1.82
PPP1R3F-205ENST00000495799 ZBTB41Q5SVQ8 909 aa26.4■■□□□ 1.82
PPP1R3F-205ENST00000495799 NOTUMQ6P988 496 aa26.4■■□□□ 1.82
PPP1R3F-205ENST00000495799 WDR49Q8IV35 697 aa26.4■■□□□ 1.82
PPP1R3F-205ENST00000495799 THNSL1Q8IYQ7 743 aa26.4■■□□□ 1.82
PPP1R3F-205ENST00000495799 CCDC170Q8IYT3 715 aa26.4■■□□□ 1.82
PPP1R3F-205ENST00000495799 CPB2Q96IY4 423 aa26.4■■□□□ 1.82
PPP1R3F-205ENST00000495799 CELF4Q9BZC1 486 aaKnown RBP26.4■■□□□ 1.82
PPP1R3F-205ENST00000495799 PDE11AQ9HCR9 933 aa26.4■■□□□ 1.82
PPP1R3F-205ENST00000495799 SPTLC3Q9NUV7 552 aa26.4■■□□□ 1.82
PPP1R3F-205ENST00000495799 TRPV2Q9Y5S1 764 aa26.4■■□□□ 1.82
PPP1R3F-205ENST00000495799 FHOD1Q9Y613 1164 aa26.4■■□□□ 1.82
PPP1R3F-205ENST00000495799 SOWAHDA6NJG2 315 aa26.39■■□□□ 1.82
PPP1R3F-205ENST00000495799 CYLC1P35663 651 aaPredicted RBP26.39■■□□□ 1.82
PPP1R3F-205ENST00000495799 SV2AQ7L0J3 742 aa26.39■■□□□ 1.82
PPP1R3F-205ENST00000495799 LMO3Q8TAP4 145 aa26.39■■□□□ 1.82
PPP1R3F-205ENST00000495799 FAM81BQ96LP2 452 aa26.39■■□□□ 1.82
PPP1R3F-205ENST00000495799 POP1Q99575 1024 aaKnown RBP26.39■■□□□ 1.82
PPP1R3F-205ENST00000495799 KBTBD13C9JR72 458 aa26.39■■□□□ 1.81
PPP1R3F-205ENST00000495799 ZC3H11AO75152 810 aaKnown RBP eCLIP26.39■■□□□ 1.81
PPP1R3F-205ENST00000495799 RAPGEF1Q13905 1077 aa26.39■■□□□ 1.81
PPP1R3F-205ENST00000495799 PTGISQ16647 500 aa26.39■■□□□ 1.81
PPP1R3F-205ENST00000495799 SLC9C1Q4G0N8 1177 aa26.39■■□□□ 1.81
PPP1R3F-205ENST00000495799 WDR59Q6PJI9 974 aa26.39■■□□□ 1.81
PPP1R3F-205ENST00000495799 SH3TC2Q8TF17 1288 aa26.39■■□□□ 1.81
PPP1R3F-205ENST00000495799 SEZ6LQ9BYH1 1024 aa26.39■■□□□ 1.81
PPP1R3F-205ENST00000495799 TOPORSQ9NS56 1045 aaPredicted RBP26.39■■□□□ 1.81
PPP1R3F-205ENST00000495799 RAB20Q9NX57 234 aa26.39■■□□□ 1.81
PPP1R3F-205ENST00000495799 TNFSF9P41273 254 aa26.38■■□□□ 1.81
PPP1R3F-205ENST00000495799 ASIC2Q16515 512 aa26.38■■□□□ 1.81
PPP1R3F-205ENST00000495799 ZACNQ401N2 412 aa26.38■■□□□ 1.81
PPP1R3F-205ENST00000495799 SEZ6Q53EL9 994 aa26.38■■□□□ 1.81
PPP1R3F-205ENST00000495799 E4F1Q66K89 784 aaPredicted RBP26.38■■□□□ 1.81
PPP1R3F-205ENST00000495799 IQCEQ6IPM2 695 aa26.38■■□□□ 1.81
PPP1R3F-205ENST00000495799 SLC27A1Q6PCB7 646 aa26.38■■□□□ 1.81
PPP1R3F-205ENST00000495799 C15orf39Q6ZRI6 1047 aa26.38■■□□□ 1.81
PPP1R3F-205ENST00000495799 CCAR2Q8N163 923 aaKnown RBP26.38■■□□□ 1.81
PPP1R3F-205ENST00000495799 STK33Q9BYT3 514 aa26.38■■□□□ 1.81
PPP1R3F-205ENST00000495799 CDHR5Q9HBB8 845 aa26.38■■□□□ 1.81
PPP1R3F-205ENST00000495799 AIPL1Q9NZN9 384 aa26.38■■□□□ 1.81
PPP1R3F-205ENST00000495799 NOD1Q9Y239 953 aa26.38■■□□□ 1.81
PPP1R3F-205ENST00000495799 CCDC175P0C221 793 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms