RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 CYP26C1Q6V0L0 522 aa20.32■□□□□ 0.84
CLCNKA-207ENST00000495784 PALB2Q86YC2 1186 aa20.32■□□□□ 0.84
CLCNKA-207ENST00000495784 GPR65Q8IYL9 337 aa20.32■□□□□ 0.84
CLCNKA-207ENST00000495784 KIFAP3Q92845 792 aa20.32■□□□□ 0.84
CLCNKA-207ENST00000495784 KIF2CQ99661 725 aa20.32■□□□□ 0.84
CLCNKA-207ENST00000495784 CCDC113Q9H0I3 377 aa20.32■□□□□ 0.84
CLCNKA-207ENST00000495784 SNTG2Q9NY99 539 aa20.32■□□□□ 0.84
CLCNKA-207ENST00000495784 CACNG4Q9UBN1 327 aa20.32■□□□□ 0.84
CLCNKA-207ENST00000495784 KIAA1024Q9UPX6 916 aa20.32■□□□□ 0.84
CLCNKA-207ENST00000495784 STK24Q9Y6E0 443 aa20.32■□□□□ 0.84
CLCNKA-207ENST00000495784 CASTOR2A6NHX0 329 aa20.31■□□□□ 0.84
CLCNKA-207ENST00000495784 SPATA31D3P0C874 917 aa20.31■□□□□ 0.84
CLCNKA-207ENST00000495784 EFNA5P52803 228 aa20.31■□□□□ 0.84
CLCNKA-207ENST00000495784 TCF15Q12870 199 aa20.31■□□□□ 0.84
CLCNKA-207ENST00000495784 ECM1Q16610 540 aa20.31■□□□□ 0.84
CLCNKA-207ENST00000495784 SPATA31D4Q6ZUB0 917 aa20.31■□□□□ 0.84
CLCNKA-207ENST00000495784 GLYCTKQ8IVS8 523 aa20.31■□□□□ 0.84
CLCNKA-207ENST00000495784 C4orf32Q8N8J7 132 aa20.31■□□□□ 0.84
CLCNKA-207ENST00000495784 SNX29Q8TEQ0 813 aa20.31■□□□□ 0.84
CLCNKA-207ENST00000495784 HDAC7Q8WUI4 952 aa20.31■□□□□ 0.84
CLCNKA-207ENST00000495784 SMG7Q92540 1137 aaKnown RBP20.31■□□□□ 0.84
CLCNKA-207ENST00000495784 STAMQ92783 540 aa20.31■□□□□ 0.84
CLCNKA-207ENST00000495784 PAAF1Q9BRP4 392 aa20.31■□□□□ 0.84
CLCNKA-207ENST00000495784 KIFC3Q9BVG8 833 aa20.31■□□□□ 0.84
CLCNKA-207ENST00000495784 PLEKHA4Q9H4M7 779 aa20.31■□□□□ 0.84
CLCNKA-207ENST00000495784 USP20Q9Y2K6 914 aa20.31■□□□□ 0.84
CLCNKA-207ENST00000495784 TGM5O43548 720 aa20.3■□□□□ 0.84
CLCNKA-207ENST00000495784 RFPL2O75678 378 aa20.3■□□□□ 0.84
CLCNKA-207ENST00000495784 C1RP00736 705 aa20.3■□□□□ 0.84
CLCNKA-207ENST00000495784 THP07101 528 aa20.3■□□□□ 0.84
CLCNKA-207ENST00000495784 U2AF2P26368 475 aaKnown RBP eCLIP20.3■□□□□ 0.84
CLCNKA-207ENST00000495784 PTGDRQ13258 359 aa20.3■□□□□ 0.84
CLCNKA-207ENST00000495784 PDIA5Q14554 519 aa20.3■□□□□ 0.84
CLCNKA-207ENST00000495784 DCAF4L1Q3SXM0 396 aa20.3■□□□□ 0.84
CLCNKA-207ENST00000495784 HASPINQ8TF76 798 aa20.3■□□□□ 0.84
CLCNKA-207ENST00000495784 RHOBTB2Q9BYZ6 727 aa20.3■□□□□ 0.84
CLCNKA-207ENST00000495784 MFSD1Q9H3U5 465 aa20.3■□□□□ 0.84
CLCNKA-207ENST00000495784 PIDD1Q9HB75 910 aa20.3■□□□□ 0.84
CLCNKA-207ENST00000495784 POLD4Q9HCU8 107 aa20.3■□□□□ 0.84
CLCNKA-207ENST00000495784 WDR6Q9NNW5 1121 aaKnown RBP20.3■□□□□ 0.84
CLCNKA-207ENST00000495784 DDX19AQ9NUU7 478 aaKnown RBP20.3■□□□□ 0.84
CLCNKA-207ENST00000495784 FNIP2Q9P278 1114 aa20.3■□□□□ 0.84
CLCNKA-207ENST00000495784 GDAQ9Y2T3 454 aa20.3■□□□□ 0.84
CLCNKA-207ENST00000495784 DENND4AQ7Z401 1863 aa20.3■□□□□ 0.84
CLCNKA-207ENST00000495784 KMT2EQ8IZD2 1858 aa20.3■□□□□ 0.84
CLCNKA-207ENST00000495784 MYO10Q9HD67 2058 aa20.3■□□□□ 0.84
CLCNKA-207ENST00000495784 PTGESO14684 152 aa20.29■□□□□ 0.84
CLCNKA-207ENST00000495784 RPL17P18621 184 aaKnown RBP20.29■□□□□ 0.84
CLCNKA-207ENST00000495784 GBP2P32456 591 aaPredicted RBP20.29■□□□□ 0.84
CLCNKA-207ENST00000495784 TDGQ13569 410 aa20.29■□□□□ 0.84
CLCNKA-207ENST00000495784 EEF1DP3Q658K8 133 aa20.29■□□□□ 0.84
CLCNKA-207ENST00000495784 APBB1IPQ7Z5R6 666 aaPredicted RBP20.29■□□□□ 0.84
CLCNKA-207ENST00000495784 IRF2BPLQ9H1B7 796 aa20.29■□□□□ 0.84
CLCNKA-207ENST00000495784 DAXXQ9UER7 740 aaPredicted RBP20.29■□□□□ 0.84
CLCNKA-207ENST00000495784 KIF3AQ9Y496 699 aa20.29■□□□□ 0.84
CLCNKA-207ENST00000495784 PCDHB6Q9Y5E3 794 aa20.29■□□□□ 0.84
CLCNKA-207ENST00000495784 CLUHO75153 1309 aa20.28■□□□□ 0.84
CLCNKA-207ENST00000495784 LAD1O00515 517 aa20.28■□□□□ 0.84
CLCNKA-207ENST00000495784 KIF4AO95239 1232 aa20.28■□□□□ 0.84
CLCNKA-207ENST00000495784 EDN1P05305 212 aa20.28■□□□□ 0.84
CLCNKA-207ENST00000495784 CENPBP07199 599 aaPredicted RBP20.28■□□□□ 0.84
CLCNKA-207ENST00000495784 TOB1P50616 345 aaPredicted RBP20.28■□□□□ 0.84
CLCNKA-207ENST00000495784 NUBP1P53384 320 aa20.28■□□□□ 0.84
CLCNKA-207ENST00000495784 C8orf34Q49A92 452 aa20.28■□□□□ 0.84
CLCNKA-207ENST00000495784 RTP2Q5QGT7 225 aa20.28■□□□□ 0.84
CLCNKA-207ENST00000495784 ATF7IP2Q5U623 682 aa20.28■□□□□ 0.84
CLCNKA-207ENST00000495784 FAM171A1Q5VUB5 890 aa20.28■□□□□ 0.84
CLCNKA-207ENST00000495784 KRT79Q5XKE5 535 aa20.28■□□□□ 0.84
CLCNKA-207ENST00000495784 PRSS55Q6UWB4 352 aaPredicted RBP20.28■□□□□ 0.84
CLCNKA-207ENST00000495784 CEP57Q86XR8 500 aa20.28■□□□□ 0.84
CLCNKA-207ENST00000495784 IGSF22Q8N9C0 903 aa20.28■□□□□ 0.84
CLCNKA-207ENST00000495784 PHOX2BQ99453 314 aa20.28■□□□□ 0.84
CLCNKA-207ENST00000495784 TTPALQ9BTX7 342 aa20.28■□□□□ 0.84
CLCNKA-207ENST00000495784 KCNK12Q9HB15 430 aa20.28■□□□□ 0.84
CLCNKA-207ENST00000495784 ZDHHC7Q9NXF8 308 aa20.28■□□□□ 0.84
CLCNKA-207ENST00000495784 DNM3Q9UQ16 869 aa20.28■□□□□ 0.84
CLCNKA-207ENST00000495784 PLXNA3P51805 1871 aa20.27■□□□□ 0.84
CLCNKA-207ENST00000495784 CCDC169A6NNP5 214 aa20.27■□□□□ 0.84
CLCNKA-207ENST00000495784 K7ERI5 159 aa20.27■□□□□ 0.84
CLCNKA-207ENST00000495784 ELAVL2Q12926 359 aaKnown RBP20.27■□□□□ 0.84
CLCNKA-207ENST00000495784 ZNF707Q96C28 371 aaPredicted RBP20.27■□□□□ 0.84
CLCNKA-207ENST00000495784 NT5C3AQ9H0P0 336 aa20.27■□□□□ 0.84
CLCNKA-207ENST00000495784 IGSF9Q9P2J2 1179 aa20.27■□□□□ 0.84
CLCNKA-207ENST00000495784 C2orf16Q68DN1 1984 aa20.26■□□□□ 0.83
CLCNKA-207ENST00000495784 PEX3P56589 373 aa20.26■□□□□ 0.83
CLCNKA-207ENST00000495784 RABEP1Q15276 862 aa20.26■□□□□ 0.83
CLCNKA-207ENST00000495784 NT5DC1Q5TFE4 455 aa20.26■□□□□ 0.83
CLCNKA-207ENST00000495784 MCTP1Q6DN14 999 aa20.26■□□□□ 0.83
CLCNKA-207ENST00000495784 ASTLQ6HA08 431 aaPredicted RBP20.26■□□□□ 0.83
CLCNKA-207ENST00000495784 LILRA6Q6PI73 481 aa20.26■□□□□ 0.83
CLCNKA-207ENST00000495784 DTHD1Q6ZMT9 781 aa20.26■□□□□ 0.83
CLCNKA-207ENST00000495784 TMEM105Q8N8V8 129 aa20.26■□□□□ 0.83
CLCNKA-207ENST00000495784 PIK3R5Q8WYR1 880 aa20.26■□□□□ 0.83
CLCNKA-207ENST00000495784 ATOH1Q92858 354 aaPredicted RBP20.26■□□□□ 0.83
CLCNKA-207ENST00000495784 PRKD2Q9BZL6 878 aa20.26■□□□□ 0.83
CLCNKA-207ENST00000495784 CXCL16Q9H2A7 254 aa20.26■□□□□ 0.83
CLCNKA-207ENST00000495784 FBXL21Q9UKT6 434 aa20.26■□□□□ 0.83
CLCNKA-207ENST00000495784 DUSP12Q9UNI6 340 aa20.26■□□□□ 0.83
CLCNKA-207ENST00000495784 PP2D1A8MPX8 630 aa20.25■□□□□ 0.83
CLCNKA-207ENST00000495784 E9PMD0 336 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms