RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 FAXDC2Q96IV6 333 aa7.06□□□□□ -1.28
NCKAP1-208ENST00000495619 C7orf25Q9BPX7 421 aa7.06□□□□□ -1.28
NCKAP1-208ENST00000495619 NDC1Q9BTX1 674 aa7.06□□□□□ -1.28
NCKAP1-208ENST00000495619 LSM14BQ9BX40 385 aaKnown RBP7.06□□□□□ -1.28
NCKAP1-208ENST00000495619 TRHDEQ9UKU6 1024 aa7.06□□□□□ -1.28
NCKAP1-208ENST00000495619 SPEF1Q9Y4P9 236 aa7.06□□□□□ -1.28
NCKAP1-208ENST00000495619 XPOTO43592 962 aaKnown RBP7.05□□□□□ -1.28
NCKAP1-208ENST00000495619 SCAF4O95104 1147 aaKnown RBP7.05□□□□□ -1.28
NCKAP1-208ENST00000495619 ADH4P08319 380 aa7.05□□□□□ -1.28
NCKAP1-208ENST00000495619 SPATA31D3P0C874 917 aa7.05□□□□□ -1.28
NCKAP1-208ENST00000495619 CDKN1CP49918 316 aaPredicted RBP7.05□□□□□ -1.28
NCKAP1-208ENST00000495619 CLRN1P58418 232 aa7.05□□□□□ -1.28
NCKAP1-208ENST00000495619 DGCR2P98153 550 aa7.05□□□□□ -1.28
NCKAP1-208ENST00000495619 ATP2B3Q16720 1220 aa7.05□□□□□ -1.28
NCKAP1-208ENST00000495619 BMT2Q1RMZ1 405 aa7.05□□□□□ -1.28
NCKAP1-208ENST00000495619 SPATA31D4Q6ZUB0 917 aa7.05□□□□□ -1.28
NCKAP1-208ENST00000495619 ZNF572Q7Z3I7 529 aaPredicted RBP7.05□□□□□ -1.28
NCKAP1-208ENST00000495619 PNMA8AQ86V59 439 aaPredicted RBP7.05□□□□□ -1.28
NCKAP1-208ENST00000495619 TRMT2AQ8IZ69 625 aaKnown RBP7.05□□□□□ -1.28
NCKAP1-208ENST00000495619 LILRA3Q8N6C8 439 aaPredicted RBP7.05□□□□□ -1.28
NCKAP1-208ENST00000495619 REXO4Q9GZR2 422 aaKnown RBP7.05□□□□□ -1.28
NCKAP1-208ENST00000495619 FAM20BO75063 409 aa7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 MT-CO1P00395 513 aa7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 NCLP19338 710 aaKnown RBP7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 SREBF1P36956 1147 aa7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 IARSP41252 1262 aaKnown RBP7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 MXRA7P84157 204 aa7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 MTMR1Q13613 665 aa7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 INAVAQ3KP66 663 aa7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 C1QL3Q5VWW1 255 aa7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 Q6ZVL8 140 aa7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 MIGA2Q7L4E1 593 aa7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 GPRIN1Q7Z2K8 1008 aa7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 ZNF276Q8N554 614 aa7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 PPM1NQ8N819 430 aa7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 SLC16A11Q8NCK7 471 aa7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 OR10H5Q8NGA6 315 aa7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 HAS1Q92839 578 aa7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 CPEB1Q9BZB8 566 aaKnown RBP7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 KCNH6Q9H252 994 aa7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 DMRT3Q9NQL9 472 aa7.04□□□□□ -1.28
NCKAP1-208ENST00000495619 ADCY6O43306 1168 aa7.03□□□□□ -1.28
NCKAP1-208ENST00000495619 KATNA1O75449 491 aa7.03□□□□□ -1.28
NCKAP1-208ENST00000495619 RPLP2P05387 115 aaKnown RBP7.03□□□□□ -1.28
NCKAP1-208ENST00000495619 RAP2AP10114 183 aa7.03□□□□□ -1.28
NCKAP1-208ENST00000495619 KRT85P78386 507 aa7.03□□□□□ -1.28
NCKAP1-208ENST00000495619 PPP3CAQ08209 521 aa7.03□□□□□ -1.28
NCKAP1-208ENST00000495619 ABCB5Q2M3G0 1257 aa7.03□□□□□ -1.28
NCKAP1-208ENST00000495619 MFSD14BQ5SR56 506 aa7.03□□□□□ -1.28
NCKAP1-208ENST00000495619 ATXN7L2Q5T6C5 722 aaPredicted RBP7.03□□□□□ -1.28
NCKAP1-208ENST00000495619 REPS2Q8NFH8 660 aa7.03□□□□□ -1.28
NCKAP1-208ENST00000495619 CASKIN2Q8WXE0 1202 aa7.03□□□□□ -1.28
NCKAP1-208ENST00000495619 CEP95Q96GE4 821 aa7.03□□□□□ -1.28
NCKAP1-208ENST00000495619 SLC2A13Q96QE2 648 aa7.03□□□□□ -1.28
NCKAP1-208ENST00000495619 TRIM8Q9BZR9 551 aa7.03□□□□□ -1.28
NCKAP1-208ENST00000495619 HOMER2Q9NSB8 354 aa7.03□□□□□ -1.28
NCKAP1-208ENST00000495619 NOP58Q9Y2X3 529 aaKnown RBP7.03□□□□□ -1.28
NCKAP1-208ENST00000495619 HLA-DOAP06340 250 aa7.02□□□□□ -1.29
NCKAP1-208ENST00000495619 ATP5JP18859 108 aa7.02□□□□□ -1.29
NCKAP1-208ENST00000495619 ACVRL1P37023 503 aa7.02□□□□□ -1.29
NCKAP1-208ENST00000495619 ANAPC15P60006 121 aa7.02□□□□□ -1.29
NCKAP1-208ENST00000495619 EFCAB2Q5VUJ9 269 aa7.02□□□□□ -1.29
NCKAP1-208ENST00000495619 DRC7Q8IY82 874 aa7.02□□□□□ -1.29
NCKAP1-208ENST00000495619 CBARPQ8N350 705 aaPredicted RBP7.02□□□□□ -1.29
NCKAP1-208ENST00000495619 HDAC10Q969S8 669 aa7.02□□□□□ -1.29
NCKAP1-208ENST00000495619 FUBP3Q96I24 572 aaKnown RBP eCLIP7.02□□□□□ -1.29
NCKAP1-208ENST00000495619 SLC46A2Q9BY10 475 aa7.02□□□□□ -1.29
NCKAP1-208ENST00000495619 NRDE2Q9H7Z3 1164 aa7.02□□□□□ -1.29
NCKAP1-208ENST00000495619 TRPM5Q9NZQ8 1165 aa7.02□□□□□ -1.29
NCKAP1-208ENST00000495619 INTUQ9ULD6 942 aa7.02□□□□□ -1.29
NCKAP1-208ENST00000495619 GAGE12BA1L429 117 aa7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 GAGE12HA6NDE8 117 aa7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 CXorf49A8MYA2 514 aaPredicted RBP7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 RNASET2O00584 256 aaKnown RBP7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 NARSO43776 548 aaKnown RBP7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 NDUFS2O75306 463 aa7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 ALOX15P16050 662 aaPredicted RBP7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 LAG3P18627 525 aa7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 WASP42768 502 aa7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 NHLH2Q02577 135 aa7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 AFMIDQ63HM1 303 aa7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 ANKS6Q68DC2 871 aa7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 PPP4R3AQ6IN85 833 aa7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 GDF7Q7Z4P5 450 aa7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 Q8N1X5 172 aa7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 CCHCR1Q8TD31 782 aa7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 JADE3Q92613 823 aa7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 MRI1Q9BV20 369 aa7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 CCDC8Q9H0W5 538 aaPredicted RBP7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 MMRN2Q9H8L6 949 aa7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 SLC2A4RGQ9NR83 387 aa7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 AJAP1Q9UKB5 411 aaPredicted RBP7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 WASHC2CQ9Y4E1 1318 aa7.01□□□□□ -1.29
NCKAP1-208ENST00000495619 AKAP8O43823 692 aaKnown RBP7□□□□□ -1.29
NCKAP1-208ENST00000495619 GPR32O75388 356 aa7□□□□□ -1.29
NCKAP1-208ENST00000495619 RPS6KA4O75676 772 aa7□□□□□ -1.29
NCKAP1-208ENST00000495619 POMCP01189 267 aa7□□□□□ -1.29
NCKAP1-208ENST00000495619 ALAS1P13196 640 aa7□□□□□ -1.29
NCKAP1-208ENST00000495619 APOBEC3AP31941 199 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms