RNA–Protein interactions for RNA: ENST00000495484.5

PCDH15-223, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 1,896 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-223	ENST00000495484	PARN	O95453	639 aa	Known RBP	10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	CD4	P01730	458 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	ADRB2	P07550	413 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	ZSCAN20	P17040	1043 aa	Predicted RBP	10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	FGFR4	P22455	802 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	FMO5	P49326	533 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	CLDN10	P78369	228 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	SYCP1	Q15431	976 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	FBXO47	Q5MNV8	452 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	ZNF618	Q5T7W0	954 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	EEF1DP3	Q658K8	133 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	CRELD2	Q6UXH1	353 aa	Predicted RBP	10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	GBP6	Q6ZN66	633 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	FAM228A	Q86W67	206 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	PPFIBP1	Q86W92	1011 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	BRSK2	Q8IWQ3	736 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	CD302	Q8IX05	232 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	THNSL1	Q8IYQ7	743 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	SPC24	Q8NBT2	197 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	DHX38	Q92620	1227 aa	Known RBP	10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	CCDC127	Q96BQ5	260 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	CCDC94	Q9BW85	323 aa	Predicted RBP	10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	MCOLN1	Q9GZU1	580 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	C11orf49	Q9H6J7	331 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	RPF1	Q9H9Y2	349 aa	Known RBP	10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	ST3GAL5	Q9UNP4	418 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	STAG3L1	P0CL83	205 aa		10.02	□□□□□ -0.81
PCDH15-223	ENST00000495484	SELP	P16109	830 aa		10.02	□□□□□ -0.81
PCDH15-223	ENST00000495484	TRIM21	P19474	475 aa	Known RBP	10.02	□□□□□ -0.81
PCDH15-223	ENST00000495484	GRM5	P41594	1212 aa		10.02	□□□□□ -0.81
PCDH15-223	ENST00000495484	MNX1	P50219	401 aa	Predicted RBP	10.02	□□□□□ -0.81
PCDH15-223	ENST00000495484	NFX1	Q12986	1120 aa	Known RBP	10.02	□□□□□ -0.81
PCDH15-223	ENST00000495484	PAK2	Q13177	524 aa		10.02	□□□□□ -0.81
PCDH15-223	ENST00000495484	EXOC3L4	Q17RC7	722 aa		10.02	□□□□□ -0.81
PCDH15-223	ENST00000495484	FIGN	Q5HY92	759 aa		10.02	□□□□□ -0.81
PCDH15-223	ENST00000495484	KRT39	Q6A163	491 aa		10.02	□□□□□ -0.81
PCDH15-223	ENST00000495484	NECAB2	Q7Z6G3	386 aa		10.02	□□□□□ -0.81
PCDH15-223	ENST00000495484	HACE1	Q8IYU2	909 aa		10.02	□□□□□ -0.81
PCDH15-223	ENST00000495484	ZSWIM2	Q8NEG5	633 aa		10.02	□□□□□ -0.81
PCDH15-223	ENST00000495484	ACAP3	Q96P50	834 aa		10.02	□□□□□ -0.81
PCDH15-223	ENST00000495484	TSPAN18	Q96SJ8	248 aa		10.02	□□□□□ -0.81
PCDH15-223	ENST00000495484	ASB7	Q9H672	318 aa		10.02	□□□□□ -0.81
PCDH15-223	ENST00000495484	PLEKHA5	Q9HAU0	1116 aa		10.02	□□□□□ -0.81
PCDH15-223	ENST00000495484	DAAM1	Q9Y4D1	1078 aa		10.02	□□□□□ -0.81
PCDH15-223	ENST00000495484	PQBP1	O60828	265 aa	Known RBP	10.01	□□□□□ -0.81
PCDH15-223	ENST00000495484	DLAT	P10515	647 aa	Known RBP	10.01	□□□□□ -0.81
PCDH15-223	ENST00000495484	TNNI1	P19237	187 aa		10.01	□□□□□ -0.81
PCDH15-223	ENST00000495484	MXI1	P50539	228 aa		10.01	□□□□□ -0.81
PCDH15-223	ENST00000495484	YARS	P54577	528 aa	Known RBP	10.01	□□□□□ -0.81
PCDH15-223	ENST00000495484	HS1BP3	Q53T59	392 aa		10.01	□□□□□ -0.81
PCDH15-223	ENST00000495484	TWF2	Q6IBS0	349 aa	Known RBP	10.01	□□□□□ -0.81
PCDH15-223	ENST00000495484	NT5DC4	Q86YG4	428 aa		10.01	□□□□□ -0.81
PCDH15-223	ENST00000495484	WDR49	Q8IV35	697 aa		10.01	□□□□□ -0.81
PCDH15-223	ENST00000495484	CCDC150	Q8NCX0	1101 aa		10.01	□□□□□ -0.81
PCDH15-223	ENST00000495484	ZNF397	Q8NF99	534 aa	Predicted RBP	10.01	□□□□□ -0.81
PCDH15-223	ENST00000495484	NEK11	Q8NG66	645 aa		10.01	□□□□□ -0.81
PCDH15-223	ENST00000495484	TRIM44	Q96DX7	344 aa	Predicted RBP	10.01	□□□□□ -0.81
PCDH15-223	ENST00000495484	EDEM3	Q9BZQ6	932 aa		10.01	□□□□□ -0.81
PCDH15-223	ENST00000495484	MMRN2	Q9H8L6	949 aa		10.01	□□□□□ -0.81
PCDH15-223	ENST00000495484	TMEM8A	Q9HCN3	771 aa		10.01	□□□□□ -0.81
PCDH15-223	ENST00000495484	TOPORS	Q9NS56	1045 aa	Predicted RBP	10.01	□□□□□ -0.81
PCDH15-223	ENST00000495484	PADI3	Q9ULW8	664 aa		10.01	□□□□□ -0.81
PCDH15-223	ENST00000495484	LRRIQ3	A6PVS8	624 aa	Predicted RBP	10	□□□□□ -0.81
PCDH15-223	ENST00000495484	NRDC	O43847	1150 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	NPTXR	O95502	500 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	TRIM49	P0CI25	452 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	TRIM49C	P0CI26	452 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	GHR	P10912	638 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	SKI	P12755	728 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	RAB27A	P51159	221 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	ATN1	P54259	1190 aa	Predicted RBP	10	□□□□□ -0.81
PCDH15-223	ENST00000495484	DLG4	P78352	724 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	MYL7	Q01449	175 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	TBX2	Q13207	712 aa	Predicted RBP	10	□□□□□ -0.81
PCDH15-223	ENST00000495484	MAPK8IP2	Q13387	824 aa	Predicted RBP	10	□□□□□ -0.81
PCDH15-223	ENST00000495484	LPIN1	Q14693	890 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	ENOX2	Q16206	610 aa	Known RBP	10	□□□□□ -0.81
PCDH15-223	ENST00000495484	DUOXA2	Q1HG44	320 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	LRRC8D	Q7L1W4	858 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	CDR2L	Q86X02	465 aa	Predicted RBP	10	□□□□□ -0.81
PCDH15-223	ENST00000495484	CNGA4	Q8IV77	575 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	CACTIN	Q8WUQ7	758 aa	Known RBP	10	□□□□□ -0.81
PCDH15-223	ENST00000495484	CGRRF1	Q99675	332 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	TRAIP	Q9BWF2	469 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	PDE11A	Q9HCR9	933 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	ERVK-5	Q9HDB9	667 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	PLCB1	Q9NQ66	1216 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	SIK3	Q9Y2K2	1263 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	EVPL	Q92817	2033 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484		A0A1W2PQJ5	194 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	AKR1B15	C9JRZ8	316 aa	Predicted RBP	10	□□□□□ -0.81
PCDH15-223	ENST00000495484	TULP1	O00294	542 aa	Predicted RBP	10	□□□□□ -0.81
PCDH15-223	ENST00000495484	TNFSF9	P41273	254 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	GCLM	P48507	274 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	OSTN	P61366	133 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	TLE2	Q04725	743 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	PPP3CA	Q08209	521 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	TSR1	Q2NL82	804 aa	Known RBP	10	□□□□□ -0.81
PCDH15-223	ENST00000495484	SEZ6	Q53EL9	994 aa		10	□□□□□ -0.81
PCDH15-223	ENST00000495484	ZBTB41	Q5SVQ8	909 aa		10	□□□□□ -0.81

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